Conserved Protein Domain Family
GcrA

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COG5352: GcrA (This model is not part of the current CDD release)
Transcription factor GcrA interacting with sigma70 [Transcription]
Statistics
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PSSM-Id: 512744
Aligned: 263 rows
Threshold Bit Score: 89.606
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_141451537   3 MEWTE----ELIARLRDLWSQGLSTAEIGRQL------AITKNAVVGKAHRL----GLP--PRP-SPIRSKGtgttrkka 65 
WP_067959028   2 TAWVDmnrrAKEAAVQPLLVKGLTYSEIAAQLg-----ATSRNAVGTIASSLrakgALSlkPRT-SSPEPKA-------- 67 
WP_013477852   9 AGWSD----ERRERAAALWKEGYSAREIAGMIkgp-gfTPSRNSVIGIMHRA----GLS--GSKgEPKSTRQ-------- 69 
WP_028170523   4 GHWPS----EHSDALRDYFLKGMSYAEIGRQIngrfgtAYTRNAVAGRAKRL----GLA--APA-RMTSPSi-------- 64 
WP_164527878   2 VDWTS----SMAETARDLRREGMSCGLIAQRL------GVSRNAVIGKLNRM----GVP--SPR-EPGGHGG-------- 56 
WP_164527898   2 VDWTS----SMAETARDLRREGMSCGLIAQRL------GVSRNAVIGKLNRM----GVP--SPR-EPGGHGG-------- 56 
WP_126011087   2 VDWTS----SMAETAEKLRGEGMSCGVIAQRL------GVSRNAVIGKLNRM----GVP--SPR-EPGGHGG-------- 56 
WP_045368436   4 TPWTD----DQVATLIRLRKAGLSNSKIGDAV------GKTRDSVNTKIRLL----GLP--KRT-PKTTQKQh------- 59 
WP_203064719   7 DTWTE----GRVERLRALWADGLSLTVIARELg----dGVTRSAVAGKLSRLk---GVK--QRP-TVVRVSP-------- 64 
WP_015932224   4 TEWPS----AAIDMLRELWSAGKSGSAIAEAInaahglSLSRSAVMGKIRRL----GLV--GQQ-GVQPEAD-------- 64 
WP_141451537  66 sraksgeagekaS-APAQtdagq--spqktPK-----APqakkdaaas--------------------------aapaea 111
WP_067959028  68 ------------A-REKRagktpakfggdtPR-----KP----------------------------------------- 88 
WP_013477852  70 ------------PsKPKL------------PKrv-laKStvwsddeknilsrgfdhghsaaqiaktlkvagydrqadaia 124
WP_028170523  65 ------------V--PSL------------PSgacliGPp---------------------------------------- 78 
WP_164527878  57 ---------------PGTri--------qlGKr---eAP----------------------------------------- 69 
WP_164527898  57 ---------------PGTri--------qlGKr---eAP----------------------------------------- 69 
WP_126011087  57 ---------------PGTri--------qlGKr---eAP----------------------------------------- 69 
WP_045368436  60 -----------aSlvAKQs-----------------vSA----------------------------------------- 70 
WP_203064719  65 ---------------PPR------------PKvv--rEPl---------------------------------------- 75 
WP_015932224  65 --------------TPAE------------PA-----AP----------------------------------------- 72 
WP_141451537 112 kagKisaapasads--agaraqpqgaA-PAPAsteqgpAPVASipapeaepvqvprdvKTPETAE----RPDAsaavaga 184
WP_067959028  89 --------------------------T-PKRDkv--lrRSAAGsv------------eVAPMRGPn---NPHPydfkara 124
WP_013477852 125 sklRhmgltrssvernetarlaisllRgPI--------IPAt---------------------------PPPP------- 162
WP_028170523  79 --------------------------------------RPA----------------------MPnlnlPPKSam----- 93 
WP_164527878  70 --------------------------EtPR--------GPKAVklkd--------------------------------- 82 
WP_164527898  70 --------------------------EtPR--------GPKAVklkd--------------------------------- 82 
WP_126011087  70 --------------------------EtPR--------GPKAVqlkd--------------------------------- 82 
WP_045368436  71 --------------------------S-PARKa-----RPESSg--------------ALPVVAE----PPRH------- 93 
WP_203064719  76 ----------------------------PVv------eKPQ--------------------------------------- 82 
WP_015932224  73 --------------------------E-PAA-------APAe---------------------------PPQPyv----- 86 
WP_141451537 185 prkvatsqnstprPK-------AEGRPAARRTTqarrepaerpVRQGPTCQWPN-GDPG-TPGFHFCGAPPLPG------ 249
WP_067959028 125 -------eqratsPGvvv-atkDAFDPIPGIPPv--------hFAVNTGCKWPV-DGIE-GKGLLCCGADKEPE------ 180
WP_013477852 163 -------------PAq---------lSAGEGVSl--------lALDKGMCKSPM-GERD-GEAV-FCGLPVA-Gf----- 203
WP_028170523  94 ------------kParv---klRCVGVQPRLITl--------gELGRDDCRYPYgGDKD-GEAIAFCGHPRQRG------ 143
WP_164527878  83 ----------dlaPTikasaagLDAERLAEDISl--------aQLGGFACHFPVsGHQVaADEHRFCGLPVADRdagelk 144
WP_164527898  83 ----------dlaPAvkasaagLDAERLAKDISl--------aQLGGFACHFPVsGHQVaADEHRFCGLPVADRdagelk 144
WP_126011087  83 ----------glaPSvkasaavLDADRLAEDITl--------eRLGGLACHFPVsGHQVaADEHRFCGLPVADPdagelk 144
WP_045368436  94 -------------PEt------------mARVPf--------mETKPGQCRFPL-WGRD-ETTGDCCGNKAMAG------ 132
WP_203064719  83 -------------PTiaa-aemWHALPGTVPISl--------eELTRDLCAWPI-ND---TKPYLFCGCKVARG------ 130
WP_015932224  87 -----------frPEg------kPAERPADGYLl--------hQLGPGDCRYPItGSVA-PSQHRFCGEPVKDG------ 134
WP_141451537 250 --KPYCAEHAAIAYVKL------------RDRRD------S 270
WP_067959028 181 --RTYCGPHQRLSRTDY------------TKRQRaeivsaE 207
WP_013477852 204 -rKPYCSGCSNTSKVPRtlgrisepydihNVRRSyl---pK 240
WP_028170523 144 --SSYCTPHARLTRKSE------------AASARvagpvvL 170
WP_164527878 145 lnRRYCAHHAARARA--------------RDGQAgv----- 166
WP_164527898 145 lnRPYCAHHAARARA--------------RDGQAga----- 166
WP_126011087 145 lnRRYCTHHAARARA--------------RDGQAgf----- 166
WP_045368436 133 --RPYCEAHHRMTRVPV------------PKRRK------G 153
WP_203064719 131 ---SFCAAHASVGYRSD------------AEK--------- 147
WP_015932224 135 --SCYCLAHFRIAYSPPgafgv--syaslAEKQE------Q 165
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