Conserved Protein Domain Family
Trl1

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COG5324: Trl1 
tRNA splicing ligase [Translation, ribosomal structure and biogenesis]
tRNA splicing ligase is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 444116
Aligned: 7 rows
Threshold Bit Score: 658.392
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_602419      1 MRTLLLLRGAQASGKSTWVTENNLEPYTLNADKIRLNIANPILHEDGSIEISQKNNKLTWELLYKYLEMRMENGDFTIID 80 
WP_011198084  28 TLSADQLRLIHQSPVLNLEGKYDISQKNDGKVWKLLFSLLEERMERGEFTIVDATHAKQSMISGYKALVLKYRYRAYVVD 107
WP_015769031  17 TFIKKNNLEPYTLEADKFRLLISNPKLTKFGDFEISQKNDRLAWEMLFNCLEERMKKGEFTVVDATHATKRAMNSYKALA 96 
WP_012864250  17 QWIRDNNLEAYTLEADHFRMLLRSPSLSENGWYISQEDNGPAWKLLLDCLEKRMSNGDFVVLDATHTTSKAVNAYKELLN 96 
WP_013398473  87 NMNVLLRNMKTFLEFARKYCYTAYLVDFQGELTLDELYARNRTREYTKRVPEEVIETAYNNHRELRENWRSILKNYRDVV 166
WP_014486725  36 ILYSGVFPDGYNGLEISEKDNAYIWNNLILSILENRFRLGQFTILDSTGLFNLNSITELAKKYGYRIVAVLFDHLSLKEC 115
WP_015227230  49 YHPSLILSSDALREQCYGSRPTCEGESPQPVDDRLIFQIMEEITHSRLREGLTTFIDATMLNDQTRGDFIKIAQKLDCSY 128
NP_602419     81 ATHSDIKLMNKYRDLANIYKYTIYYLEFDTPLEECLKRNKERVGYKYVPEKVIERTWETIKNNEKLPSVLKKINSIDEII 160
WP_011198084 108 FPNVPLETALLRNRERAEHKRVPDSVVHAMHERILSEPAPSWTTVIKPEEFADAMQYKPRRLDSYKKIHVIGDVHGCFTV 187
WP_015769031  97 DKYKYTIYYYQLDTPLEECIKNNKKRESYKQVDENVISRMFRNIQNEKLSGSFKRIFDINEIINFYVADVTGKYDKVRII 176
WP_012864250  97 KYKYTVYYYEPDTSLEDCLARNATRADYKRVPEQVIHRMYKMIKTSTLPKFCKKINSIDEINNYFTVNLTNRYDRVRVIG 176
WP_013398473 167 AGYIAPNQVFTELFTPVRALDNYHKVVVVGDIQGMGGELEKLIDTLSPETGLSDENICWIFAGDLFDRGQNPEKVFDILE 246
WP_014486725 116 IENVRKRGVGSNIPEEVIQDFFMRMKNFKLSGANIFKASDYGSAETALLEACKWDSFYLNETEFEKYDNIKVIPDLHGEY 195
WP_015227230 129 QVLIFDVSDEELHQRNRSRKRIVPSAVLEKQIRRHQKASRYPHLTSDYFEITIDPYSISDDIKLDVIGDIHGMTQELDQL 208
NP_602419    161 NFYTADVNEYKKVIIIGDIHSCAEPLKEVLKDFSEENLYIFVGDYFDRGIQAVETFKIMLDLLEKPNVILIEGNHENDSV 240
WP_011198084 188 LDSYLKGRLEDDELYIFTGDMVDRGIENAKVVQFLLRIKDRKNVILLEGNHDKYLKQYGHDEVTRSSVFNKKTKPELDEA 267
WP_015769031 177 GDIHSCFTAISEIVKDFDKNTLYVFLGDFLDRGIEHKQTLLLMLDLYKKENVIMIEGNHEIHLENFANDFKINSKEFLNV 256
WP_012864250 177 DIHGCYTALQQAITPWDEKTLYIFCGDYLERGIENKEMMYEMMRLSTLPNTIMLEGNHERHIANFAFHTSLDRSKRFMKD 256
WP_013398473 247 PALGTLPNVHLVMGNHERSIMHTIRGVRRYRDARETLDALAAHGVYNSRVITMLNTAVNMMPFTLGQERYFVTHAGVAPQ 326
WP_014486725 196 DVFKKFLEKENYFNDKKTAYIFVGDLIDRGVKSKELLDYFLNNDIGNNVYFIEGNHDVNLNFFANDIKVTSQEFYKTTYK 275
WP_015227230 209 LTAMGYQWVEEKLMHSEDPQRRVLFLGDLVDRGYDSIGVLRRVMKAVSSGHYCVLGNHDLNLLRGLQEEKKPRSLSTQKT 288
NP_602419    241 KKFINNEEKYTKSFDETTLQPLLKEFELEYIKTGLKKIYKRLRQCFTFEFRGKKFLCTHGGLPLVPKLALVSAKEMIKGV 320
WP_011198084 268 GFDKRDIRELARRFHQIAYFTYGQDTYIITHGGISALPDNLLFTATSQLINGVGGYETDIDHVFTKNMEGRNIIQIHGHR 347
WP_015769031 257 TLPAILENEKNIDSFKREIRKFYKKLRQCYAFKFHNHKILCIHAGLSFVPNLALVSTNEMINGVGSFETEIGELYEENYL 336
WP_012864250 257 VVAPIIKNMTKKEVESLQRELRLFYKSLHQCYPFSFHGKKYLVSHGGISYVPNMTFIATSTFINGFGAYETNIANIYDTN 336
WP_013398473 327 LFADSHRTLEGVGEGYLTGLYADETFYLGSNPYSQARAGKTQYAGYEETLNDLNRVAGITQIYGHRPAALGSEGYSNLIP 406
WP_014486725 276 EIKKAFTITKQVKDNSDNVVEEKILNESELNNYKKKIRNFYKKFRLYYFFTFKGKKFFINHSGIDKMYEHIPASLLNGVV 355
WP_015227230 289 LHEILTQCDKKEIKIITHFLKRLPPYYIHQHTVYVHADIEWFDPYLTPKQHLIRGFSKLDQPHDTDQVYKTLFERGDNSY 368
NP_602419    321 GRYETEIGEVYSENYKKGLCQDFIQVHGHRGINDGEYSYCLEGRVEFGEELKVLTIDNDGNIEKSGIKNDVYNRGliitt 400
WP_011198084 348 NMFRLPVHAAAKSYNLEGQVEHGGHLRVVTIDRSGIQTHEIKNDVFKTSAPPLTSHHAHEELTVEHFLKHLDEHD----- 422
WP_015769031 337 KGKCQDFVQVHGHRGVNSTEHSICLEGEVEYGGELKYLDVMPDKILQKSVINTVYDRDYLQHELEKAKENKQINLttded 416
WP_012864250 337 YEQNMCQDFIQIHGHRGVPDGKYSFCLEGEVEFGGELKYIDITANTFTKNGIKNDVYDKDYMRHEFQNMTQHVIFtqned 416
WP_013398473 407 LESSVEFTGGELSAVVFSREDSASGAPEKALWKREIVKIPSSSLIPDPYASGSRTAGASKNAANGAAEPLNDGHRlleem 486
WP_014486725 356 TYGYGEDDNSYKSYIEVGNKFKNNHSDIIQIFGHRNVLQEELEDNLCKINDNAYCIENSVEYGEDLIILNLKYMSiesyk 435
WP_015227230 369 QLVRGHIPPTGKRSNLIDSPVSALEAGQALGGELVGLTATGDLATVDCSHYCYSPNHALLEGLKNKNIKNKEEGY----- 443
NP_602419    401 rdnsekikkfqtenelinemiassFINVKECDY-NLISLNFNRDAFNRKKWNDL--TIKARGLFVDRDSGEVKIRSYNKF 477
WP_011198084 423 ------------------------YVSEQKLAG-GISSFNFTRKAFQERKWDSV--SMKARGLFINRNTNEIVSRSYNKF 475
WP_015769031 417 vn----------------klivskLISVKKTKP-NLYSLNFGRNVFRKKLWNDS--TIKARGLFVDAETGKVKIRSYNKF 477
WP_012864250 417 in----------------iignskLVKVKQCFP-NLYSLNFTSRVFHKRLWNES--TVQARGLFVDRITGDVKLRSYNKF 477
WP_013398473 487 --------------------ranpNVNVRATEPaGVLACNFTRKAFYKGAWDKT--TAKARGLFIHAETGKIVGRGYEKF 544
WP_014486725 436 ndreienlf--dkektdselvrhkYYD-------TVYSTNFSDRVFYKRLWNEQ--TIKARGLYRYNETNEIAGRSYDKF 504
WP_015227230 444 -----------------------------------LSIYRYNAKVFYHNLWHTSpyLLMARGLVL-GLGGEIVQRPFDKI 487
NP_602419    478 FNYGER-NINLRYLYKYATYP-----IRVFKKYNGFLGLA--SVINGDVVLTSKSVTSGK----YKDIFQSIWDK-VESE 544
WP_011198084 476 FNIEERlTTKMHVLVNTLRFP-----VTVYDKANGFLGTVgyNSETDELVFTSKSYTSSGqkdgHAKWVEELFYKtFDAS 550
WP_015769031 478 FNYGENkYSTREYIENNIVYP-----VTAYEKYNGFLGIL--SVIDEKFVFATKSVTNGT----HVKYFETLFEK-ASER 545
WP_012864250 478 FNLGERpETELDNLANTLSFP-----VEIRTKENGYLAIL--GVINEELVFASKSTTDGV----HVDLFKNLFHR-LPEG 545
WP_013398473 545 FNMDEPgHESEAQVRKRLAYP-----AIARAKENGYLAII--TVFDGMLAVYSKSGVTA-----YSRHAESILHAaLTQE 612
WP_014486725 505 FNYDEVkETKLKALQNNIKFP-----VSVYKKYNGYLFLVflDKTRDELIFATKSSIGTT----MASWAESL----LTEE 571
WP_015227230 488 FNYGENk-----------TYPpldkiITASEKINGFLIAItkHPYQEGLLYTTTGSLSGT----HVDMGKEM-----SKP 547
NP_602419    545 VKELLKQTMIENNCTVVFEVVSPEYDPHIIKY-DKEHLYLLDFIENKLDLDTHNI---DLEFSEKLMKKV-------KFS 613
WP_011198084 551 QTEAMKEYVKKRNVSLVFEVVLPEKDPHIIEY-ESDKLVLLDIVKRQMKYEKLLY---EDVLRFAETFRV-------ECK 619
WP_015769031 546 MKNKLFRICSENDVSIVFEAVSDE-DRHIVDYfGKEHLFILDVIDNTLFINGVHV---DNNFSKKFLKEL-------NFD 614
WP_012864250 546 LQAEIKDLLARNSCSMIFEVISQE-DTHIIKY-DQDHLYVLDMIQNTLDVNGKHI---DVPFSREKLAELyti--lqKYD 618
WP_013398473 613 ERARLTEALTRMDSSLTVEVVDPFRDPHIVPY-EHVTLYLLDLIANTAQFRVKPArfeDLWLSPKAFAQPrpt--eeHGP 689
WP_014486725 572 NKNFIKEYCKKNNTTFVFECIHLKDSAHPIVY-NESFLILLDIIYNEESFRKLSY---EELSSKDITEQF-------QVK 640
WP_015227230 548 HYGSLIKYLLNKNQTLLFEVIHPE-DSHPIPS-ENYGIYLIGCREKTSGY----------CFTEEELDELgnkleipRPK 615
NP_602419    614 STILTKKEelr---rleNYDELyNFLHEKTMSLE-EFEGYVLCDNSGLMFKFKLPYYMLWKGRRTwlesIVQPY 683
WP_011198084 620 QKVITFHQ---------WTDFY-KWYLSVSNDPSiEEEGYVIEDSAGFMTKLKLPFYQYWKFIRG----IKHRL 679
WP_015769031 615 DNVIKMKKeik---kcnDFDEIiDLM-ENYDNFE-NAEGIVFCAENGFMFKYKARHYSLWKKRRG----ILEFY 679
WP_012864250 619 TDLISIVKtvq---qvsTMDELqGIINKELNSFH-ESEGFVLVDSNGFMTKFKGPYYNTWKHRRNr---ILEPY 685
WP_013398473 690 VRISTVEEipl----kdDADFT-RLLQEARTS---NAEGWVIRDSTGYMVKIKAPGYSATKRARaipalvdylr 755
WP_014486725 641 ERIEIFEApksniskdeYNKYIeKIIHKYVDDFSiDYEGVVFEDANCFMVKVKCPFYIIKKALRSesmrlnrls 714
WP_015227230 616 HFQASLAEv-------------lKLSNQV------EIEGYVIRDQDQYLCKVKTPYYLTLKFLSR----LSEKK 666
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