Conserved Protein Domain Family
COG5323

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COG5323: COG5323 
Phage large terminase packaging protein [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 444115
Aligned: 63 rows
Threshold Bit Score: 497.466
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_095988904   1 MvamvavqdnplaglpiirpethgrhsiseraglkfraqlrrrrelgeqltadfaitehlRLNQ-AE-VLa----wHYDP 74 
AIL12734       1 Mkg-------------------------------------------------------tlTLAP-EN-LE------NYDW 17 
WP_011542291   1 Mkhatdcvget----------------------------------------rtkldrwlkALSD-RK-CAq----lLTDW 34 
WP_013039646   1 Malsdferlahl--------------------------------------peaarervlaGLGA-AA-ADa----lAHDW 36 
WP_013420858   1 Mpsnsatkwnasfl---------------------------------asltperraeflsQLTP-RE-LKs----lRFDW 41 
WP_084179478   1 Msnnltmkp--------------------------------------------ssdflneLLSAeAErRGllrresRPKW 36 
WP_051908850   1 Mnqrqhl-----------------------------------------------killskELGR-RR-QEk----rRYDW 27 
WP_085784495   1 Migtlse------------------------------------------------sapqdALES-SS-LQt------pPW 24 
WP_089134907   1 Mfv--------------------------------------------------------sRLST-IE-QQe----fLYRW 18 
WP_121051613   1 Mtpaef-------------------------------------------------seameGIAV-KK-QNv----lVGSW 25 
WP_095988904  75 TLWRRPVQTPPSGVWRTWFLLGGRGAGKTYAGSIAVIEEAAA------DSEARILIVGPTDSEIRKTQLEGPSGILSLAP 148
AIL12734      18 HFHARPSQKIPEGDWRIWLVLAGRGFGKTRTGAETIRHWVKT------NQARRIALIGDTQEDVRDIMVEGESGLLAIHP 91 
WP_011542291  35 SWWRRADQNPPTGDWHVWLLLAGRGFGKTRTGAEWVRAFAET------TPGARIALVAASLLEARQVMVEGESGLLAIAP 108
WP_013039646  37 RWLARPEQLAPEGDWRIWLMLAGRGFGKTRAGAEWVRSVAES------DPKARIALVGATLGEARAVMVEGASGILAVAP 110
WP_013420858  42 AFWSRPEQLEPPGGWHTWLILAGRGAGKTRTGAEWVRACVCGptplsaGRYSRFALVAETAADARDVIVEGPSGLLAIHP 121
WP_084179478  37 RTIARPEQLRPI-DCVHWLYLAGRGAGKTRSAAERLRERIES------GAARYIALIGPTFADVRDIMVEGESGLQAVA- 108
WP_051908850  28 DMNGRENQRPPEGNWRTWMILAGRGFGKTRTGAETLRQWIKE------GKCERIALVGGSLHEVRSVMVEGESGLLNVHP 101
WP_085784495  25 --NPRPNQGEPSGDWRYWLVMAGRGFGKTRLGAETIRRWVME------EGARSIALVGATADEVRQVMVEGVSGLLAIHP 96 
WP_089134907  19 PFWARPEQMPPAGDWLIWLIMAGRGFGKTRAGAEWVRHIAEG------DGSARFALVGANYAETRTVMVEGESGLLSIAP 92 
WP_121051613  26 YSRARASQVVPPGDWHTWLVMAGRGFGKTRTGAEWVQRAAR-------NGGARIAIVGTTLHEARAVMVEGESGLLRVR- 97 
WP_095988904 149 PWFRPVHRRSKRTLEFPNGARAYYVPAQNPDKLRGYNVSLVWADEIVAWK----KsPEEVYRECRRVARIqtprmrqlGL 224
AIL12734      92 PDDRPHYEPSKRRLTWKNGAIATAYSAENYDQLRGPQFDHAWIDEFAKFR----E-MEKVWQQIHFALRL--------GS 158
WP_011542291 109 DHLRPEYESSLRRLTWPNGAVATLYSAVEPDSLRGPEHDAAWCDEIAKWP----K-GEAAWDNLMLTMRI--------GA 175
WP_013039646 111 WWNRPVFAPALRKLVWPNGAVATLYGAAEAESLRGPQFSHGWADEIAKWA----G-GQAAWDNLMMGMRL--------GG 177
WP_013420858 122 RGFRPKFEPSKRRLTWPNGAVAMLYNATEPDQLRGPQHDAAWCDELAKWR----Y-ARETWDMLQFGLRL--------GH 188
WP_084179478 109 GDLFETYNRSMGEIRFKGGCRARFFSGEDYDALRGWQSTDVWGDELCAWR----Y-PQQTFDMAMFGLRL--------GD 175
WP_051908850 102 AHERPLYIPSKRLIKWKNGAVAQFFGAEAYEQLRGPQFDCAWIDELAKFR----K-AEEVWQQLQLCLRL--------GD 168
WP_085784495  97 PHERPRYEPSKKRLTWPNGAVAYLYSARAYEKLRGPEFDAAWIDELAKFE----Y-GELLFQNLNLALRL--------GR 163
WP_089134907  93 PKQRPVWEPSLKRLTWENGAQAHLYSAAEPEGLRGPQHSHGWCDEIAKWMnnagQ-AEAAWDNLKMGLRL--------GS 163
WP_121051613  98 ADWRPEFEPSLRRLSWPTGAQGFLYSADDPDALRGAQHSHAWGDEIAKWP----R-GLDVWMNLRMGLRL--------GS 164
WP_095988904 225 PARLIITTTPNPNPLFREIL---SDRDg---LVLACSSTFDNAANLDGKYIAYARR-LQNTTIGRREFHGELLFLEDACL 297
AIL12734     159 HPRMVITTTPRPLPLLQQLV---AQAGq--eIVLTRGTTFENQANLSSLFIETMQKsFAGTRLGAQELLGEIIEARESAL 233
WP_011542291 176 RPQVVATTTPRCVPLVRRLI---QERG----VATTRGRTASNRRNLSVQWLATMDAiYGGTRLGRQELDGELLEDVEDAL 248
WP_013039646 178 APRVLATTTPRPVPLVRGLV---ARAGg--dVVVTRGRTADNVAHLADGFLAAMERsYGGTRLGRQELDGELIEEVEGAL 252
WP_013420858 189 DPRQIVTTTPRPIAIIREFL---GKEGh--gVVLTRGSTYDNRANLAQNYFNTIVRsYEGTRLGRQEINAELLDDVAGAL 263
WP_084179478 176 -PEAIWTTTPRNLKVLKDLI---AAPN----TKVTRSSTFANRENLAPAFFASIVRkYEGTRLGRQELEGAVLEDVEGAL 247
WP_051908850 169 SPRCILTTTPRPTKLMKELI---ASPD----VVVTKGSTFDNVANLAPTYIEQIRKqFLNTRLGAQELYAEMLTETAGAL 241
WP_085784495 164 RPKMVITTTPRARPLMKRLLgyaKKGS----LVLTTGTTYDNTEHLSAAALEEYQStFAGTRFEAQEILGQLVEDDEGTL 239
WP_089134907 164 RPQLVATTTPRPVPLVRALV---SGE-----VTITTGRTQDNHLHLPAAFLTAMEAdYRGTRLGRQELDGELIEDVEGAL 235
WP_121051613 165 APRAVLTTTPRPVPLVRRLL---EEAMaghaLIVTRGRTAENAANLPPAFLAAVTEaYGGTRLGRQELDGEMIEEVEGAL 241
WP_095988904 298 YGKVDWNASRVESVeaiap----regkP--------------------------LFDKLVVSVDPATG-------EKKDS 340
AIL12734     234 WPPALLDQYREAEP-------------S--------------------------PLKRVIIGIDPAVT-------HHDES 267
WP_011542291 249 WTRALIERCRVDAGs-----------iG--------------------------KFARVVIGVDPPAS-------AG--G 282
WP_013039646 253 WSRDLLERCRVAHVr------------G--------------------------GLTRVVVAVDPPAS---------AHG 285
WP_013420858 264 WTRSLLDQHRIARGtp----------lP--------------------------RFDRVVVGIDPAARps----gAGDKT 303
WP_084179478 248 WEAAWFEREGFRQPsafvrekgtvvfrPp------------------------aPIVKIVVALDPSVSdpekrrdPNKEP 303
WP_051908850 242 WQRSMIQYQQPTYDea---------nrP--------------------------ELERIVIAIDPATT-------AHDQS 279
WP_085784495 240 WKQDVIDTFRVKEVe------------V--------------------------PLKRVVVAVDPAAT-------HNPES 274
WP_089134907 236 WTRAMIEGCRVGRD-------------AvrvehsrytgdsanrslacarderdmGLVRIVIGVDPPAS---------KSG 293
WP_121051613 242 WSRALIERCRVPVTga---------hdE--------------------------GFARVVIGVDPPAG-------HGA-G 278
WP_095988904 341 DLHGIVVEGIREEAdgllHVYVLQDASLrSPEPTTWAQAAVDALRRWEhlapkrKAFIFAETNTGGSLVKNVIRSVDGKV 420
AIL12734     268 DETGIIVVDLGKDH----HAYVLEDLSG-RYPATTWGKIACEAYHRWK------ADRIVAEVNQGGDLVESLLRSLDPHI 336
WP_011542291 283 DACGIVVAALLRDG----RLAVVEDASAlRPLPGVWAQAVAAAAARWG------AERVVAESNMGGDMVAAVLRQADMTL 352
WP_013039646 286 DACGIVVVGLGEDR----RAYVIADATVeGATPEGWARAASGAALVHG------ADRVVAEANNGGAMVESVLRAAEAAL 355
WP_013420858 304 SETGIVVCGLGEDG----RGYVLDDLSN-RQGPMGWAQKAVAGFDLYE------ADALVVEINQGGAMVETVLRAVRGGL 372
WP_084179478 304 DACGICVAGTDESG----NGYVLGDFSK-VLSPAKWARLCVKLFDMTK------ANCVIAEANQGGELIREVIRGIASNV 372
WP_051908850 280 DETGIIVAGIDTHK----QAYVLEDHSG-KLSPNDWGRRVVDCYYRLK------ADRIVVEVNKGGDLVENVLKSIDPTI 348
WP_085784495 275 DETGLVVAALGTDN----QAYILEDLSG-RYPAREWTKRAVAAYERHK------ADGIIYEQNIGGDAVGDLIQTFLAGA 343
WP_089134907 294 DACGIIVAGLGGDG----KAYVLADASVeKASPETWARKVAEAADRFE------ADRIIAEANQGGAMVKSVLQAAKISL 363
WP_121051613 279 SVCGIVAAGLRADG----TIVVIEDASVeGLSPEGWARAVSDAAARHG------ADRVIAEVNNGGDMVARVLAAVDEAL 348
WP_095988904 421 KVKGMRAMQSKAERAAPVSAMAEARLVHMV-GKHHRLEEQLAKFTGQd---gGHGRDDRADAFAWPIYLYVCPKR----Q 492
AIL12734     337 SYQGVHASRGKYIRAEPIAAFYEQGKVHHArQGLKLLEDQMCKFLPG-----MTTSPDRVDALVWALTALMLEANm---V 408
WP_011542291 353 PVVAIHASVGKARRAEPVALAYERGQVVHA-GAFADLEDQLCGLQMGggyagPGRSPDRADACVWALAALLDGMRk--gR 429
WP_013039646 356 PVRLVHASRGKVARAEPVAALYEAGRVVHR-GGFAELEDQLCGLMLGggyvgPGRSPDRADALVWGLTELMLGKR----G 430
WP_013420858 373 PIRAVRATRGKTVRAEPIAALYAQGRVSHV-GALPTLEDQMVQFTPFgi--eGDGAADRVDALVWALADLFPRMIr---P 446
WP_084179478 373 PITLVHAANAKRPRAEPVATLYEQGRVHHC-GPMNALEEQQTSWDASd---sNSKSPNNVDALVWAFHGLGLCVAtgtrI 448
WP_051908850 349 PLKSVRATRGKYTRAEPIAALYEQNRVFHA-QPFTLMEQQICDYIPGv----TSKSPDRMDALVWALTELLLESQ----K 419
WP_085784495 344 NVIPVMARRSKITRAEPIAALYEKGRVHHVgSDLKHLEKQMTTYIPGv----SESSPDRMDALVWALSELMLGQHka-qP 418
WP_089134907 364 PVKLVHAARGKVARAEPVAALYENERVRHV-GAFPQLEDEMCGLLVGggyegPGRSPDRADALVWALTELMLGKR----R 438
WP_121051613 349 PVKSVRATRGKAIRAEPVAAQYEAGRVHHA-GAFPALEDELCGLIAGggyegPGRSPDRADALVWAVWALMGKS-----A 422
WP_095988904 493 NAgv----agRPA 501
AIL12734     409 RPy-------KVW 414
WP_011542291 430 GPg------vRVV 436
WP_013039646 431 EAr------vRGF 437
WP_013420858 447 VPdaamwddeRDG 459
WP_084179478 449 SQr------vRAK 455
WP_051908850 420 QPk------lKIW 426
WP_085784495 419 PPnl-----wRRL 426
WP_089134907 439 EPr------vR-- 443
WP_121051613 423 RPg------vRVV 429
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