Conserved Protein Domain Family
TFB3

?
COG5220: TFB3 (this model, PSSM-Id:227545 is obsolete)
Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Statistics
?
PSSM-Id: 227545
Aligned: 3 rows
Threshold Bit Score: 329.666
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6320668    2 LMDEYEENKD-MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKFKTQIFDDVEVEK 80  baker's yeast
19074822   1 -------MEErRCPVCKSDIYLNPDIVIYISP-CFHRMCESCMFRIFSRGQAPCP--ECGTILRKINYIKPTFEDITVEK 70  Encephalitozoon cun...
19113126   1 MDDEGARKVDeKCPLCQADRYLNPNMKLLINPECYHKMCESCVDRIFTTGPAQCPTPGCNKILRKAKFREQTFEDAQIER 80  fission yeast
6320668   81 EVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQ 160 baker's yeast
19074822  71 ECKVRRILLRAFGREEEEFGGDSAKYNDYLEKFEELVFEVLELKNESLVKEKVKKIQEMGQDSILN----PTPKVMPGKT 146 Encephalitozoon cun...
19113126  81 EVDVRKRISRIFNKGQQEFD-SLQAYNDYLEEVEILTFNLIYKIDVEETEEKVKQYEKQNRDSIAANSARAAAEARILAQ 159 fission yeast
6320668  161 RQKFEKEMKLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRvlkNNPYF 240 baker's yeast
19074822 147 KNVLQGR----KRQ--------------------G--YGLASEDGNKTQKIGIISDYFDPEELPRIVVEPTK-----KIY 195 Encephalitozoon cun...
19113126 160 NEILLKRQKQEAREAAIREHQKEKERREQVEQQIIFDLATSGKDPNKIIQ-LSDSLKKQQENIASSVSNISR---SSSIL 235 fission yeast
6320668  241 NSnvNVQNSrLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHrKEFIASGFNTNYAYERVLTEAFMGLGCVIS-- 318 baker's yeast
19074822 196 LP----KGF----LQPNAPGGLSYN--TIVSLAISSIGNPNI-------------------------------------- 227 Encephalitozoon cun...
19113126 236 LS--DVQQV-AEDTTPFSPLAGEKDGSKYFSYSKNTYQDLYLEKVSH-EPGRKCGFRIEDCHLRCLYEAFSGIDYDLEsl 311 fission yeast
6320668  319 EEL 321 baker's yeast
19074822     ---     Encephalitozoon cuniculi
19113126 312 KKL 314 fission yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap