Conserved Protein Domain Family
PAP1

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COG5186: PAP1 
Poly(A) polymerase Pap1 [RNA processing and modification]
Statistics
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PSSM-Id: 444067
Aligned: 8 rows
Threshold Bit Score: 820.157
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_047859736   13 YHRIRWDPRFDAREFVIGYDAHGETMEEMPFGAFAPDGEIPWHRVWYFKRGHELVWDRRERIDRLSSLSFKTSEGVAPPP 92  
AFY91546        1 MSKQKIEKQKMAMITEVYNRIIWDANLNRNMFIAGFHERISDTIREKPLAQWDDNSDIPWHRVRYIRCNETIVWDRENRI 80  
WP_012232787    1 ---------------------MRTSEEIYHRIRWDARLDPARFVMGIDVHAAEPKRVPLPAFVPGGDLPWHRVVYIEAEG 59  
WP_002618056   62 FTPSREVYHRIRWDPRFDAREFVIGYDAHAGEMEEVPFAAFVPDGEIPWHRVWYFRRGTHKVWDRKSRTDLLDALASGPA 141 
WP_015121515  101 DKSTSDIKEQPATFSTKPVYKYKVDGWQAIDYLSKSVKSNSLTVASFNVLCDVYEKEKIQTEKRLPVIVEELRKCDADII 180 
WP_050433127    1 ------------------MRTSEEIYNRIRWDARFEPARFVLGIDMHAAAPKRIPLPAFVPGGDIPWHRIVTIEADGEVI 62  
WP_080038746    1 -----MRTSEEIYHRIRWDPRFDPSRFVMGVGQRDADPKRVALPAFTPGGDIPWHRVLFVEADGELVWDRATGLDRLDTC 75  
WP_119727548    1 ------------------MRTSEEVYHRIRWDPRFDPARFTVGVNVRGADTKRVPLPSFVPGGDIPWHRVLFFEADGEIV 62  
WP_047859736   93 PPPPAPTSEAAPRFTPLPFHRYDARANTWVEAEPSVATEALPAPAELTVATFNVLFDLYDPELLATHRRTAATLSLLRSV 172 
AFY91546       81 DLISTNNLPEIAWKSEVAGSNRADLAALIANNQVEFQPRDIYTYDRDGWNVFTGAVKSVALDNTLTIVSYNILSNLHDAD 160 
WP_012232787   60 ERVWDRQTGLDSLDTTQAGRVRAPQRLRPPFFTARAAMRWEATEGRWAPAEAAAPRFTPGASARLRVLSWNTLWDRYDAE 139 
WP_002618056  142 EPAPASSVSPDEAAPVFSPLPSYHYDSREGAWCEHVPSSAASPGALPPPEELTVATFNVLFDLHEAELLDTPRRIPAALS 221 
WP_015121515  181 AIQEATPDFVRFLLAQDWVRDYYVSESSTAENIQTFANLLLSRLPYTLVEHKFSAHKHVLVGSWFINSELLQVAAVHLTS 260 
WP_050433127   63 WDRLTGVDCLGETQAGLVRTPQRLRPPFFSPRSAMRWDPAQSGWVKAETPAPTFTPEATSRLRLLTWNTLWDRYDADRIH 142 
WP_080038746   76 AAGRVRDALLLRPPFFTASTPHTWDPADGWRPATTGNEPAGHAAVGRRPAATGHASAPHEPLRVLTWNTLWDRYDSDRID 155 
WP_119727548   63 WDRSTGRDVLDSSPAGRTAHRRLLREPFFAPRTPIAFDPANGWRPARIPPFPPSASGPAAIRVLTWNTLWDRYEADRIDT 142 
WP_047859736  173 DADIIALQEVTAPFLRALLEKQWVREHYFVSDGPEASTVEPYGQVLLSRFPFAALSQCVFSRDKRIIAGELALPGGSLWV 252 
AFY91546      161 KIHTNKRLPVILSELAKTNADIIALQEVTPESLAFILATDWVKDYFVSEAPNGNNVKPYGNLIMSRWAFNLVQHQFSGHK 240 
WP_012232787  140 RIHTARRRPLLVEALGRADADVIALQEVELPLLDLLLGAGWVRADYTVSDGPRGRDVETCHLLLLSRLPVLEVGWHALGK 219 
WP_002618056  222 LLRSADADIIALQEVTEPFLRALLETPWIREHYFLSEGPGAATVTPYGQLLLSRFPFASLSQCVFSRDKRVIAGEIRLKG 301 
WP_015121515  261 NRAQNADKKRKYQLTTVVDYLRKQPGNYFIVGDFNTRNNLQEQVPDISSFVDVWQDLRPDEAGYTFNPQLNPLAELMSLA 340 
WP_050433127  143 TAQRRPLLVEALHRADADVIALQEVELPLLEMLLAAGWVRAGYTLSDGPRGRDVDTAGLLLLSRLPVLEVGWHALGPHKA 222 
WP_080038746  156 TARRRPLLLAALEEAGADVIALQEVEPALLSMLLAAPWVRDRYTVSTDPYGTDVDDAGLLLLSRLPVREAARHELSPHKA 235 
WP_119727548  143 ARRRPLLVAELERADADVIALQEVQPELLALLLAAPWIKAGYALSTGPSARDVAEYGLVLASRLPVLEAGRVALGPHKAL 222 
WP_047859736  253 ATPHLTSDRDPVRGKARAAQVQALLEWARSLGDEGRESPDIALVGDFNFGDDAPEVQDFQRAGFVDAWTALRPGDAGYTF 332 
AFY91546      241 RVLVGSWNINDRAVHLANVHLTSDRGDNALQKRTQQLATVIGYLQKQAGDRFIVGDFNTRGNQQDEIIKYGNFIDVWQNL 320 
WP_012232787  220 YKAAVAMTLALAGEPLVVVATHLTSDHAEEGARKRAAELEDLAAGLSAVEGDLVLLGDLNDGGPGPASKLGLVDAWLEAR 299 
WP_002618056  302 GTLWVATLHLTSHRAHASSSSRAAQLRAIVGWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTDVWPLLRPGE 381 
WP_015121515  341 GEAARFDRILMCSEQDSWVPQSVDLFAIEPVDNTEEKIFPSDHFGIRAVVENLTPPFRAPLSLSRRREENLATPLSLSRR 420 
WP_050433127  223 VVAMTVALAGQPLIVAATHLTSDHTHDGPLRRVTELAALSAGLGAVEGDRVLLGDLNDAGRGPAATLGMKDAWLEARGAE 302 
WP_080038746  236 VAAVVVDTATGPLVVAVTHLTSDHSADGPARRRAELAAIAEGLAGVDGDVVLAGDFNDGTDTPAAALGLRDAWTEAYGPD 315 
WP_119727548  223 DAVTVAGPAGPLAVAVTHLTSDHAEEGAARRDAELARLAEALGSVEADLVVLGDFNDGSELPARTLGLRDAWTEAHGPRD 302 
WP_047859736  333 DPSRNTLAALTTTSGRRQRLDRVLVLSASGRLILQEVELFAEAPLSGPPGPGGDALFASDHFGLSCVLERRTASVLAPAP 412 
AFY91546      321 YPDRDGYTFDPTANSLAMLMSLEGKPARLDRILWCPDLESNYQPQAMDLFGCKSFVSDDVQLYPSDHFCVCGVFKISPAT 400 
WP_012232787  300 GAGDEAPTFDPTVNPLAAVSSLTGRACRLDRVMFRGAALRPITADLEGTTPLPPDGLFLSDHYGVRVELSVGEAPGEVLD 379 
WP_002618056  382 PGYTFDPERNGLATVMTVSGRRQRLDRVLVRSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDHFGVRCILHRGETRS 461 
WP_015121515  421 REEENLTPPFRAPLSLSRRREGNLATPLSLSRRREEENLTPPLSRRGEENLATPLYLTRRGEGGEVIRDELKTIAPVYQS 500 
WP_050433127  303 DETPTFDPTVNPLAAVSSRSGRALRLDRVLVRGATLRSVAAALEGAAPVSPAGLFLSDHYGVTVDLSVGEEAGEVLDTAP 382 
WP_080038746  316 RTPTFDPAVNPLAALASLSGTAARLDRILLRGRPQVVSAALRGDTPDPGGLFISDHYAVEAVLDLTGDVRDHGVLDVPPT 395 
WP_119727548  303 TTATFDPAANPLAAITSIRGRAARLDRVLLRGAQMSVARVELRGDSPATEDGLFLSDHYGVQADLTVGTAEGGVSDARPT 382 
WP_047859736  413 ALPRVTPRPLTVPLVRQSCLVLVPPEEVWAPIQALRAVHDSKFERWMPHVTLLFPFVPEDSFGEAEALLSEALRDIEPFE 492 
AFY91546      401 TAQNSPDRIDLTAIAPVYESILAIIPPEDLFPSIQAIRQQYDPGFFNIVPHITLLYGFLPDRYFEEVVDLIAPILAKIEP 480 
WP_012232787  380 VATTARTALAWVPPEPLWPEIQAIRALHDPQIDRWPPHVNLLFGFVPESSFEAALPLLSAAAREVGPFPAVLEGTRSFRH 459 
WP_002618056  462 PAVSRVHLAAPVHESAVVLIPPEAQWGPIQPLRAQHDRNYQRWMPHVTLLYPFVPEEHFLEAEALIAEALKHLEPFQVTL 541 
WP_015121515  501 AIVIIPPEDIVPAIQTIRQRYDARFERWMPHINLIYGFLPESYFDEAAEIITSAVAQIQPFTVNLNNFETFTHRKSSTAW 580 
WP_050433127  383 TARTALAWVPTESLWREIQAIRTAHDPQIDRWPPHVNLLFGFAPESSFEAAMPLLSAAAGEVEPFTAVLEGARSFRHSKD 462 
WP_080038746  396 ARTAVAWLPPAELWPAIQEVRRAYDPQVRRWPPHVNLLFGFVPESEFEAAAPLLSAAAAEAGPFTARLEGVRTFRHRDHV 475 
WP_119727548  383 PRTAVAWVPPREVWPVIQQVRAEHDPAFDRWPPHVNVMFGFVPECDFEEAAPLVAEAAAGVAPFTARLEGIGSFAHREHC 462 
WP_047859736  493 VMLSGFGYFEHSSDVTAWLRPDDRPHGALEALHAALEKVFPRGESRGREPEFDFTPHLTVGQLPRAPAATIRRTLATWER 572 
AFY91546      481 FTVTLADFEIFTHHKSSTAYLRPIVKPEGALHELQAALYRLFPQCYEQSTKTSAGFNPHLSVGQFANSSEAMAKLPQWHP 560 
WP_012232787  460 GADATVWLDPAAGGKDPWARLHQALARRFPRCVGRAEGYTPHLTLGRVDDPARVQPGWAAQLGRREAAVGELVLLSRRGA 539 
WP_002618056  542 TGFSFFEHPGSVTAWLQPEEHPRGALKSLQAVLEAALPQCDEQGRKSKQGFTPHLSVGQFPRSSLSDIRQKLSAWERDWH 621 
WP_015121515  581 LHPIAQPETALHQLQALLQSLFPQCNEQSRKSDAGFTPHLSVGQFSTPEEAFAKLPQWHPRSFTVKSIALISRRGNEAFE 660 
WP_050433127  463 ATVWLDPAAAGTAPWARLHQALVRRFPRCRGRAEGYTPHLTLGRVDEPARVQAEWTARLGRREAPVGELVLLSRRGDGPM 542 
WP_080038746  476 TAWLDPAADDPAPWSRLYEALRRRFPRCKGRPEGYTPHLTLGRTEDPIRLDAMTAQVGELVLLSRRADEPMRPRARIVLG 555 
WP_119727548  463 TVWLDPAAAGDEPWQALRGALERAFPRCRGRFRQYVPHLTLGTAPTPDALRPELPAMSVRVGELVLLSRRGSEPMRPRAT 542 
WP_047859736  573 DWRPIRFEVSDVCLTSKRGDGPFEVRRRVPLGGRPrsgasrftpsgpvrevrssaeeKDVLRAVLSArGAWSSAETRHAR 652 
AFY91546      561 IKFTVDAVSLLSRTRDKPCVVKHIVGVGKLRPKAIens-----------------elIELITEIEPV-LTDAQQSHRDTV 622 
WP_012232787  540 EPMQVRASVALGSGSVRWAAEPAPAASPRAPKPDR-----------------------------------------ASAL 578 
WP_002618056  622 PLSFEAREVCLISRRGNDPFEVRRRIALGRAKRSLse-------------------pRSTLHDALSArEGWESSEAHRAR 682 
WP_015121515  661 VRRIIDLGAEASDIIPSELINLVNQLQPKLNQAQ---------------------------------------QIQRDTV 701 
WP_050433127  543 QARAWVALGSGVVRWASEAVAPSATGTARPPAAAR--------------------------------------PDGSAAL 584 
WP_080038746  556 TGELHWLPDPEATGENPDVLKSGENPTDEHTSGA-------------------------------------------PGV 592 
WP_119727548  543 VTLGTGELRWLDDDPEQAEHPHAAAAPATTDGGTG----------------------ADVVRGLAPVsGADTAGELVPHV 600 
WP_047859736  653 QAVVGRLEALCARAGAELLPYGSYLLGTDNAGSDVDAVAVGPASLSREDFAHTLTRLVAE------QegPASARFVADAA 726 
AFY91546      623 VAVVKQACTECLGFAASLHLLGSARLGVASSTSDLDVVCLIPDYLTGESFLTRVADCLQGlcdspeErlCQRSQVVLDAK 702 
WP_012232787  579 VARLKAALP-----GGALHVTGSRRLGCALPGADLDLVAALPGPIDLDAVEVQVRSALPE---------ASTVRRVEAIR 644 
WP_002618056  683 IQAVKRLNEVCSRLGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSREDFAGALLQALTQ------EkdCEGARFIADAA 756 
WP_015121515  702 LEIVSQACKECLGFQPNLQLLGSYRLGVESPESDLDVVCQIPTYLSGDDFLKNVQQRLKGl--------CESIQLVLDAK 773 
WP_050433127  585 VAELEAALP-----GGVLHVTGSRRLGCALPGGDLDLVAVLPGPVDLDATEARVRAALPD---------ASTLRRVEAIR 650 
WP_080038746  593 TRRLREALE-----PGVVHVVGSRRMGCALPGADLDLVAVLPGEPDLAEVETRVRAALPE---------VSRLRRVVGAR 658 
WP_119727548  601 VARLREAFG-----DGVVHVTGSRRLGCALPGADLDLVVALP---SVEGVRERVAAAFPE---------ASGLRRVVAAT 663 
WP_047859736  727 LPLVKLSLDGVHFDVSYARrpegVEPCPPTEL-LARYGERLDIPGFRSLNGWRDTQVLLDCVg----------------- 788 
AFY91546      703 YPVLRLEIEGISLDLLYTQ----VAVSDGWET-RNIRDLRSQIKDTKSIVGCWEADLIVDLV------------------ 759 
WP_012232787  645 VPCLELCAVGLDADLTLVD----AGAVRPEHA-VARRLE-LGEAAAMALSAVTDADALLEAVdaasa------------- 705 
WP_002618056  757 IPLVKLSLGGVHFDVSYASrpegVAPCPPAEL-LARQGERLDLAGFRSLTGWADTDALLECVg----------------- 818 
WP_015121515  774 VPLLRLKLEGISLDLLYTG------VDKNWASgINPKPTKSEM----AIIGCWEADFIREFV------------------ 825 
WP_050433127  651 VPGLELCVAGLDVDLTIVD----AGTTPPEEA-VARRLE-LGEAAAMALSAVTDADAVLQAVettqelag---------- 714 
WP_080038746  659 VPGLRLRTGALDVDLTVVP----SGTLPPEQA-VTRRAE-LGQAAATALSAMSDADAVLRAVgavsdahagpvsdahawp 732 
WP_119727548  664 GAGLRMRVGALDVDLLLVE----TGDVPPGEA-VARRNE-LDEAAAIALGGVSDADAVLEAA------------------ 719 
WP_047859736  789 -----------------HEGAGAERFRTVLRAVRSWAKARGVYSHALGYLGGLSWSVLVAWACthapREAS---RSDGGL 848 
AFY91546      760 -----------------KQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTC----IDYRgpdKSLAAL 818 
WP_012232787  706 ---------------psaapRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVV----CDAPd--LEPGPL 764 
WP_002618056  819 -----------------REEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACmrapRDSS---RTEEQL 878 
WP_015121515  826 -----------------QEYVPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCqycdKNHTqpdK----L 884 
WP_050433127  715 ------------ptphtgpARRREAFLILARTVKLWARAKGLDAAPFGGLPGIAWLVLSARTV----REARd--LEPGRL 776 
WP_080038746  733 vsdadavlgaagadhaaSAGSGHAAFARLARQVKAWARARGLDSAPFGGLPGLAWTIMAARTA-----------HGDGDP 801 
WP_119727548  720 -------------------GDRREEFRWLARRVKAWAGAKGLDAAPFGGLPGIAWCVLAARTV----RDA----AAGDDL 772 
WP_047859736  849 LAYFFETFSAWQWPRPVTLTGETAGYRTSDRRDLMPVVAPALPPRNTARNVSRSTLQVLRDELSRACEVVRRARAEgtEA 928 
AFY91546      819 LANFFQILSQHNWRQTIALTELGKQHQVKLPQDLLPIISSIEPCKNTARNITRSTAKILRDEFARAAEISTNILVG--KD 896 
WP_012232787  765 LSRFFGAWAAWDFRRPIALDPSAPAVGTPG--DPVRIATPTAPVRSCSDTVGAAALATLSDELYSAWEAVESALAAg-RD 841 
WP_002618056  879 LDYFFEMFAAWPWPLPVTLTPGTARYVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEgtAE 958 
WP_015121515  885 LANFFNHLNQYNWRQPIALTDAGKQYSVQVPRDLLPIITSIEPCQNTARNITRSTAEILSGEFARATEMTQEIAAG--NL 962 
WP_050433127  777 LASFFGNWAAWDWRSPIALAPSAPAVGAPG--DPVRIATPTPPLRSCSDGVSTASLANLSEELYAAWEVVEAALTEg-RD 853 
WP_080038746  802 LSRFFGTWAAWDWREPISLAPDVTIVEPA----PVVVLTPSAPVRNCARQITPGGLELLTQELYRAWELVEDGRA----- 872 
WP_119727548  773 LREFFARWAAWDWRDPVGPEDVPP--GDA----PVRICTPSAPFRLCSEQVGAGGRDLLTAELYAAWEALESGNE----- 841 
WP_047859736  929 AWAALFEPVDLEREFPVRLRVSVEAPSPETRERAAGWVLGHLTALVYRLEadr----glFARPFP 989 
AFY91546      897 AWTSLYEPIDLTIGTNALLSIEILDTDEQCRQKCSDLLESTIIGLTIQLEql-----dvFVRPNP 956 
WP_012232787  842 PLPDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGWVRGRIRALLSSFEragvgdlraWPHAFD 906 
WP_002618056  959 AWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEgdr----rlFLRPFP 1019
WP_015121515  963 DWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKECGYLEGYIISLIIQLEnh-----giFVRPWA 1022
WP_050433127  854 PLPDLCAPPLLHRRHAAWAVITVAVTRPEGLPAAVGRMRGRMRALLSAFEragvtdlraWPRAFD 918 
WP_080038746  873 --AELTAPPPLHRRHAAWAVVTVRSGELDAL---LGRIRGRMLELIGALEeagvpdahaWPRPFD 932 
WP_119727548  842 --AALASPPPMHRRHAAWAVVTVRADRDDRFTERLGRVRGRMPSLLAALEdagvrdahaWPRPFe 904 
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