Conserved Protein Domain Family
XerD

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COG4974: XerD (This model is not part of the current CDD release)
Site-specific tyrosine recombinase XerD [Replication, recombination and repair]
Statistics
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PSSM-Id: 512728
Aligned: 886 rows
Threshold Bit Score: 65.0427
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011029596   4 LIDEdlcFedaagprptmvMslwlRELp---lSG-ApSP--KSWRTYAQALKS-WAEFL----------D-ArriPVFAD 65 
WP_285627530  68 LAQE---Y-----------M-----NiktrgddP-I-KE--KTRQKYQDLLDNyILPYW----------K-----GRIAN 109
WP_152098304  24 dergkwvtktghrlkektermaeadedrakrirkgeltptsevilvelleifrtnlevaanskryvtqtvnrvkrifdac 103
WP_000026851 229 LAKK---Y-----------L----KNRl---iTG-DiAF--ATARFYIRVLTR-FFQNIs---------KnKe-tRNSLN 273
WP_015191290     --------------------------------------------------------------------------------    
WP_009547958     --------------------------------------------------------------------------------    
WP_068827210  93 VFEI---Y-----------L----KNIsieykDGnK-Sl--DTYKTYNSRIKN-LKIWL----------E-En----rLQ 135
WP_226613462 201 dvAR---Y----------------KRI-----KGnK-TTtiNTNTIYp---cKvFFDWLcstircfkdyGi---nDLPLW 249
WP_015190092     --------------------------------------------------------------------------------    
WP_041547826 174 EVKK---Y-----------V----KHLc---kTG-R-SL--STIQQDLSTLRR-FSRYLv---------R-En-iS-SFD 215
WP_011029596  66 R-----QRLREaLsmyAEYrLSgpLe--aR------L-SPASw-NLAVRTLSSFYQWAAAE----GHA-P--TvPFSy-- 121
WP_285627530 110 S-----ITPFE-V---EKF-KQf-LctpeArvnk--nkkEPFa-KSTISEIYKLFAYMMNKaeiwEFI-D--KnPCRk-- 170
WP_152098304 104 qfttladlrapaaldqykaflaafkykkgkkgaergC-SQQTi-NHYTTTLKTFCHWAVTS----RKM-P--DcPLLt-- 172
WP_000026851 274 E-----LDRCH-I---EAY-IEf-Lfeya---anknLqSTKNfvREELKTIRRFLNDIITQ----NYAiApyQd-Irf-l 333
WP_015191290     --------------------------------------------------------------------------------    
WP_009547958     --------------------------------------------------------------------------------    
WP_068827210 136 DlycykFDYEL-I---DSF-LDy-L----Ryd--keV-SARTr-DNYMTFITTLSLWMMSK----KYL-A--HnPCEg-- 192
WP_226613462 250 K-----LKEDH-F---WEY-RAy-Lv---KevkngnI-TElSa-KKRFQRLKGVFNKL-REl---GKV-N--DnfYSk-- 304
WP_015190092     --------------------------------------------------------------------------------    
WP_041547826 216 E-----INRSL-I---LDylv-------------reQkVNK----LKLSGLRKLFTIGTTK----GWFd------IDqdi 259
WP_011029596 122 V-RQs-M--TcpdgARvevtrnlatvR---TgnAHatrkYlekpyadllmraLagndptGERDV--SF------RGR-Et 185
WP_285627530 171 I-EM--P--Kv---PK----------R---E--KI----Y------------Y------RPEEIteLL------SLI-Kr 198
WP_152098304 173 L-KKt----Kit-vKKg---------R-------R----A------------A------TVAECdkLLkaagkgDELyg- 207
WP_000026851 334 IyPQdlP--Kh---EK----------KnssQ--ID----Y------------I------PDFVLeqLF------EHI-N- 366
WP_015191290   1 -----------mkvAGn---------G---Q--GK----I------------L------TPEELrlLF------Tqg--- 24 
WP_009547958   1 -----------mkvNRy---------G---R--AE----I------------L------TSDQIslLF------Teg--- 24 
WP_068827210 193 F-KKi----N-------------------------------------------------KKTEAsrCVfpqgirEQVle- 217
WP_226613462 305 I-----PniQs---SEyi---------------yRd----------------Ip-----TEDQLrcFF------DVIgKy 334
WP_015190092   1 -----------mknNRh---------G---Q--AA----I------------F-------SDADyvKV------Rrs--- 23 
WP_041547826 260 IrDAdyP--Kq---YQ----------S---N--PD----P------------I------SDQVReqVE------QNL-H- 289
WP_011029596 186 ----------------------------G--RNA-AVIGLALSSGL---RSQEFTYLTVYEV-PpLrrRRtA---VpVSl 227
WP_285627530 199 dtqlelartelmkeqtnfkpftvqkkiitalKNQ-LVINIAIKTGS---RRGAIAALRRGDI-N-L--TD-K---Y-IT- 264
WP_152098304 208 --------------------------ltG--EERaILYRLALNTGF---RVSELASLTPSSF-H-I--DA-K---S-AY- 246
WP_000026851 367 ----------------------------DlhKDLiPVVWIAFKTGL---RISDVLTLQNNCL-A-K--VN-GkysI-ITd 409
WP_015191290  25 --------------------------fvSp-RDR-ALFGICLFTGC---RVSEALALQTSDIkGg----------T-LT- 61 
WP_009547958  25 --------------------------flNp-RDK-ALFGICLYAAA---RINEAVTLFYGDViG-I---K-GireK-LV- 66 
WP_068827210 218 --------------------------fwK--EHNiNYFVLCMTCYYclvRRTELTKIRVRDL-N-L--NK-Q---T-LF- 259
WP_226613462 335 sn--------------------------hpkRDR-LVYGLMLLMGL---RKSEAAYLRKASV-N-F--EK-Q---T-LT- 374
WP_015190092  24 --------------------------iaNk-KHR-LLFDIARYTGE---RWGAIVQLQVSDVfD-D---N-GvrsH-IT- 65 
WP_041547826 290 ----------------------------LlpDPIaRMWLIGYFSAM---RPSELALLKRDCL-V-R--EG-Qh-wK-LIw 331
WP_011029596 228 vLap----pTA---------KG-RKG-RSTWIGSEDLARVHDYIgwERaaaaEgsrwRPrdpLfveapthdgalingtrr 292
WP_285627530 265 -FsrqvvytPGkgtyleeglKT-QDK-NTVFINDSLVEMIERYY--VE----Ldkl----feLsdg-------------- 317
WP_152098304 247 -Vel-----rAsd------aKN-RQT-AEQPIPAEFAVSLGKFL--KG----L----P---------------------- 280
WP_000026851 410 -Ia----------------kTF-VKGhR-IPIDNKLADIIAVLI--AD----S----KSks------------------- 441
WP_015191290  62 -Frk----sTT---------KGkLKT-RVVDIQPGLAALLADYKp----------------------------------- 91 
WP_009547958  67 -Irs----fNT---------KGkQDT-REIDIHPRLTQYLQEYQ--DS----Ypsl------------------------ 101
WP_068827210 260 -Ve-------Aen------aKN-NRT-AHVSVPKELVCFLANHV--KK----A----K---------------------- 291
WP_226613462 375 -Fk----------------rKG-RVV-RTLPIPSILKRLLEDYTf--E-------------------------------- 401
WP_015190092  66 -FraitrkaST---------RGiRTT-RQVPVHPELREILEKYG--Cp-------------------------------- 100
WP_041547826 332 -Hr----------------kKT-DDYhE-IPISRTVAKVVQDQQ--EY----I----QNlw------------------- 363
WP_011029596 293 rwhsltpaE-RlrlvapggGsalLAVQA--G-------G---------K--P--FV-------D---WATVLR--RTA-- 335
WP_285627530 318 -----kipK-T--------Dl--LFMKM--SdtqkykaG---------D--L--LN-------Pd-nISSEFK--RYI-- 354
WP_152098304 281 --------S-D--------Ql--IWPGDwkLy------Aa--------R--M--LR-------Td-lIGTGI-------- 307
WP_000026851 442 ------tkDnNp------nNy--IFAi--yK-------Gkrk-------gmP--FTqh--------mVRAHLN--HLS-- 477
WP_015191290  92 --------L-P--------Ga--LFPGM--R-------G---------R--TltLT-------Rf-mADKILR--DAC-- 120
WP_009547958 102 ------nkY-N--------Pn--LFPGR--H-------G---------R--Gh-IH-------Ka-sADRILR--GIC-- 131
WP_068827210 292 --------S-T--------Df--IFSADnfKp------Gt--------N--Q--LN-------Pn-tITNKWS--VMR-- 322
WP_226613462 402 --------G-E--------Dy--LFSNEp-K-------Gf--------------VSk----------IGNDYKvySYLan 430
WP_015190092 101 --------K-T--------Rw--LFPSP--V-------D---------E--EthIT-------Lr-aADLMLR--GAV-- 129
WP_041547826 364 ------gdKw---------Dy--LFCh--yH-------NlsktdvsqpQleP--VTkvlpihaNhplSVG-IR--TLI-- 410
WP_011029596 336 -Q------RIrdrfepS-F--PHVHPHVTRHTFAMATLerlvrgyyqqaaqlvvDAgGddalalyltkadPLLVLRDLLG 405
WP_285627530 355 -K------RK------G-L--REIPFHKLRSTNITYLA----------------NS-Gv-----------DLVTVSELAG 390
WP_152098304 308 ---------------------TGLDFHSLRTTFITNLA----------------RA-Gv-----------HPRRAQQLAR 338
WP_000026851 478 -KtkniidEQ------GeIf--HFKTHQFRHTYAVKLL----------------NG-Ga-----------DILTIQELLA 520
WP_015191290 121 -L------RV------G-L--EGVSTHSFRRTALTMMS----------------SA-Gi-----------PLRVIQEISG 156
WP_009547958 132 -K------KL------E-I--EGVSTHSFRRTALTQMS----------------DA-Gv-----------PLRHIQAISG 167
WP_068827210 323 -K------KI------D-Id-TKYKWYGLKDSGITDLI----------------IK-Gv-----------NLKSVRDQAR 359
WP_226613462 431 wEf-----K-------G-------GPHLLRHTFITLLC----------------EKc-------------DPRTLQYLSG 462
WP_015190092 130 -E------RA------Y-LahKGYSTHSTRRTFITTLY----------------RK-Gv-----------DIHTIQLITG 167
WP_041547826 411 -TvldirdEN------G-Ll-AKFQSKLLRSTRLTELF----------------AQ-Gh-----------DLAVVSAWAG 453
WP_011029596 406 HTS-AVTT-QAY-LHLLDTqRIyRDAYataggalavdsdvvaefeDEV 450
WP_285627530 391 HSD-TSVTkDYY-VASYDS-SK-VDAA------------------NKF 416
WP_152098304 339 HSD-INLT-MAFyTKLDRD-EL----A------------------NDL 361
WP_000026851 521 HSS-PEMT-LRY-AKLLDD-TK-RKAF------------------ESV 545
WP_015191290 157 HND-LGTL-QRY-LEVSPE-QK-RNAV------------------AAI 181
WP_009547958 168 HRT-LAAL-ERY-LGVTDK-QK-QHAI------------------STL 192
WP_068827210 360 HHS-IKQT-EEYiPRNMKE-AD----I------------------NIL 382
WP_226613462 463 HES-LHAL-SKY-IHVTPS-NL-SKKI------------------ELM 487
WP_015190092 168 HQD-LKSL-IRY-IEVDPE-RT-RSAI------------------ALL 192
WP_041547826 454 HKQfATTA-THY-TEVSCN-LI-EKET------------------GHI 479
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