Conserved Protein Domain Family
TraF

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COG4959: TraF (This model is not part of the current CDD release)
Type IV secretion/DNA transfer system protease TraF [Intracellular trafficking, secretion, and vesicular transport]
Type IV secretion/DNA transfer system protease TraF; is part of the Pathway/BioSystem: Type IV secretion system
Statistics
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PSSM-Id: 512715
Aligned: 573 rows
Threshold Bit Score: 35.2084
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_232743872 167 VLYQDKTLSINGKEVAHMRDGDyFEpdrsayvgrytEQLGAvqhsillnkqapqdfmpisdypyrknceyL------SNG 240
WP_072694870  88 VRYEQDKLYINNKLVKEPFLNR-SEisdepg----------------------------------lwtsnFtmi-ndNAN 131
WP_179946098  89 IEYKNDQLYVNGKKVPEKFLTG-IKkrknel----------------------------------vyttdLkssellGVD 133
AUS08617     101 VEIKEGQLYINGQILMEPYGPRsdk------------------------------------------rinQ------ETV 132
AUS10059     103 VEIKDGQLYINGHMLVEPYLASmnr------------------------------------------sdnQ------EPV 134
WP_157721853 160 VEIRDAQFYIDGKKLDTFYGSF-HDp----------NETPEpdd------------------------lyL------APV 198
WP_049720379  87 VEIKEGQLYINGEKFEEPYLLHknk------------------------------------------sdhF------KPV 118
WP_047943448  90 IEIYDDTLYINGEKYDEPYLQE-KKkhllpn---------------------------------qrltenL-------KV 128
WP_255236327  88 VEYRDDILYVNDEAVDEPYLDD-YKeqaeyl----------------------------------pltenFhirdvtGYE 132
WP_092480076  87 IRYENDQLFVNDQPVKESFLNN-DYvekagg----------------------------------vwtsnFtlesltGEA 131
WP_232743872 241 VrctVPPDHYFMMGDN-RDNSLDSRYWGFVPDQNIVGRAFFIWmnFS 286
WP_072694870 132 E---VPDGHYFVMGDN-RRYSYDSRFYGSISSEEVLGEIIMMYypSE 174
WP_179946098 134 K---IPDNQYFVLGDN-RRLSKDSRSFGTISTNDIIGKVRMVYypVW 176
AUS08617     133 V---VPADHFFVLGDN-RLTSYDSRQFGAIKKDDIIGVVVK------ 169
AUS10059     135 I---VPAEHFYVLGDN-RSISYDSRQFGAIKKDDIIGVVIK------ 171
WP_157721853 199 K---VPDGHVFVIGDTwSISAMDSRHYGPLSETDIIGKVIGYRi--- 239
WP_049720379 119 H---VPTGQYFVLGDV-RSASQDSRYYGAIKKDDIIGVVIQ------ 155
WP_047943448 129 T---VPKGHLFVLGDN-RQNSMDSRQLGCISEDAVVGKAVFRFypVM 171
WP_255236327 133 T---VPEGHIFVLGDN-RQRSRDSRQIGMIPYDEVVGKANFVIwpIQ 175
WP_092480076 132 V---IPEGHYFVLGDN-RRLSHDSRYYGPIPAEMIVGEAIMVYypLP 174
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