Conserved Protein Domain Family
FDXACB

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COG4937: FDXACB 
Ferredoxin-fold anticodon binding domain [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 443964
Aligned: 17 rows
Threshold Bit Score: 500.698
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM07934       9 SSGKTKVLILGGTGEMGQWFTRFFKERGYKVTVWGKGGKVEVARKLNVPFASELDAAIPENDIVIVSVPINVTEETIAEV 88 
WP_011171458   1 MIISIIGGTDGLGKWFASFLKNRGYDVLVSGRDVIKGKEVEKELGVTYTNNNIDAAEKGDIVIISVPINVTESVIKEVAP 80 
WP_011406665   6 NNINITIIGGSRGLGKWIANELHKDNFNVKITSRNRSSGEKIAHKMGVKYDDDNIEAIADANIIIFSVPIEYMVDTIKEV 85 
WP_012955270   1 ----MKIGIIGGTRGLGRTLAWYLKDFDFDVTVTGRDSIVGAQVSEEIGVKYSNNNKKIVQDSDIVIISVPISSTESVIE 76 
WP_012956773   4 EDNKNMTIIGASRGLGKWIAQHLKEDFNITITSRNQAEGQEVANELKVSYNNDNIDAIKDANIIIFSVPIEHMATTIKEV 83 
WP_010870117   5 NLTISIIGGTDGLGKWFARYLKNKGFNVIVTGRDIEKGKNVEKELGVEFTNNNIEAAKKGDIVIVAVPINVTERVIKEVA 84 
WP_013413699   1 -MKNKKVAVIGGSRGLGKWIAKFLKKEGFKVTITSRDHEYGRKVAKKMGVKYCENNIDAAKSSDIVIVSVPIASTVKVIK 79 
WP_013866723   1 -MIISIIGGTDGLGKWFARFLKNKGFDVVVTGRDTIKGKKVEKEIGVRYTNNNIEASKIGDIVMVAVPINITEKVIKEIA 79 
WP_013645633   1 ---MVKIAVIGGTRGLGRWIAKFLAEKGFDVLITGRNVTDGELVSKKIGTGYTNNNSLAAETSDVVIISVPIHATPNIIK 77 
WP_013798277   3 NYKISIIGGTDGLGKWFAKYLRNKGFDVTVTGRDIAKGKSVEKELGVKFTNNNIEAAKEGDIVIIAVPINVTERVIKEVA 82 
AAM07934      89 APKMKAGSLLMDFTSTKVKPVEAMQRFAPAGVEILGTHPMFGPTIPTIRGQTVILVPVKERSEKWFPVIRQLFEEGGAHV 168
WP_011171458  81 HVKKGSLLMDITSIKERPAKLMAEFSKTGVFVLPTHPMFGPETPSLNRQVVILTPTEKEKTNPFFEKIKEFLEIEGAKVI 160
WP_011406665  86 APYAPKDSLLMDVTSVKTEPAEALSKYAPEDTYILPCHPMFGPRIPSLDGQVVILTPIEDRCRLWYDKIVYYLKNKDANL 165
WP_012955270  77 ELAPFMKDGSVMLDVTSVKEGPSKKMKECLSEGVEFIPTHPVFGPRTTDLKGQIIVLTPIKKGKWYPRIYKFLEDKGMRI 156
WP_012956773  84 APHAPKGSLLMDVASIKKEPAEALEKYAPKDVEILPCHPMFGPRVPTLKRQIVVLTPIENRSNSWTLVKEYLEKKECEIV 163
WP_010870117  85 PHVREGCLLMDITSIKEIPSKAMEEHVKEGVTVIPTHPMFGPSTPSLLRQVVILTPSEKHKNTEWFNKVYNFLKKEGAKV 164
WP_013413699  80 EIAPHLRKGSLLLDVTSIKEKPAKAMEKYVPNYVEVLPTHPMFGPRITSLDGQVVILTPIRKSKCLNKVINFLKEKKARV 159
WP_013866723  80 PYVRENCVLMDITSIKEIPARAMERYAKDGVCVIPTHPMFGPSTPSLKRQVVILTPSEKHKNNPWFDKIKMFLEKEGARV 159
WP_013645633  78 ELAPLMKPGSLLMDVTSVKEESSHLMEQYAAEGVEVVPSHPMFGPRIRSLDGQVVVLTPSVDGSWYTKVYKFLEHENTRI 157
WP_013798277  83 PHVREGCLLMDITSIKEIPSKTMEEYAKEGVTVIPTHPMFGPSTPSLMRQVVILTPSEKHMKSEWFRKVKDFLEKEGARV 162
AAM07934     169 EITTAAEHDRLVSVVQGLTHFAYISIGTTIDRLDFDIKKSRKFVSPVYSIMLDFVGRILGQNPYLYALIQMENPGIPEVH 248
WP_011171458 161 VVSPKEHDKIMGVVQGLTHFVYISLGSTLKDLGIDIKESRNFASPIYELMINIIARIIGQNPYLYADIQMHNPQIKTIHE 240
WP_011406665 166 VISTPQEHDKIMSVVQGLTHFSYISIASTIRRLGISVKKSREFASPVYSLMLDMISRIVSQNPYLYYSIQKSNKQTAISR 245
WP_012955270 157 IETTAEHHDDMMGIVQVLTHFSYISTASAIERLQVDLKDTQNYESPIYNLMIDTIARIVSQNPYLTYSIQHENKKGEKIR 236
WP_012956773 164 ITSPDEHDKYMSIVQGLTHFSFISLASTIKKLNINVKKSRSFSSPVYSLMLDMISRVVYQNPYLYYSIQKNNKETAYARD 243
WP_010870117 165 IVIPPEKHDRIMGIVQGLTHFAFISLGATLKELNVDIKESRKFASPIYELMISIIGRIIGQNPYLYADIQMFNPRIKEIH 244
WP_013413699 160 IVTTPKKHDKMMSVIQVLTHFAYICIASTIEKLKINIKESRKFASPIYNLMVDTIARIVAQNPHLTFSIQHENKEGEKVR 239
WP_013866723 160 IVIPPEKHDRIMGVVQGLTHYAYIALGATLKDLNINIKESRKYASPIYELMLNIIARIIGQNPYLYADIQMHNPQIKHIH 239
WP_013645633 158 IVTTPEIHDRMMSIVQGLTHFAYVSIAATIDRLDIDIKESRKFASPIYNLMLDTIARITAQNPYLVYSIQTSNKYIKDAH 237
WP_013798277 163 IIIKPEEHDRIMGVVQGLTHFAYISLGATLKELGVNIKESRKYASPIYELMIYIIGRIIGQNPYLYADIQMHNPQIKHIH 242
AAM07934     249 EAFIEECEELSSLVRAHDEEGFVRKMKAAARKYDDTAHA-LRRSDKLINSRIAEYETLLNSVGKVCGFSHVYSGRVHVGT 327
WP_011171458 241 TFIKNCENISEIVQNKDRDSFVENMKNSARHFGNETKRG-LNCSNKAVYAISKETEKLIKSVGKEIGLKHIYSENVHYGI 319
WP_011406665 246 KTLIEESNRLAKLIDDDMEEEFVYDMSESAKHLDEFEEA-LGRSDKAISVLTHDFNYIKESIGCEIGFEHQYSKKIHIGV 324
WP_012955270 237 QALFDSMSELKDALSKEDEEEFVEIALKATKHMGDIQGA-LGRSDKAINALTQEYNILLQSIGEEVGLKHIYSDTIHVGK 315
WP_012956773 244 ALIKESMRLSKLIEEGDEEDFVKAIAESAEHIDEIEEAL--VRSDKAISMLNQKANILTKLIGEEVGLEDAFSKKAYIGI 321
WP_010870117 245 ETFINQCKEISEIVKNKDREGFVKIMKEAAKHFGSEAKRgAYYSDKAVFALTSEIEKLNKLIGKDVAVKNINSNVVHFGV 324
WP_013413699 240 KLFIDIAKKMNNIIENNEKEKFIEEVRKAAKNLDDIESA-LGRSDKAIAALNEEIKKLKKSVGKEVGLKHIYSGKVHVGI 318
WP_013866723 240 ETFIKECNTIKQIVEKKDRESFAEIMKEAAKHFGNETIRgMNYSNKAVGAITEEIERIKKSIGKEIGLRHVYSNKVHFGI 319
WP_013645633 238 ETFNETFNELKNMIADGDEEGFVHAMSNAAKHIDDLESA-LGRSDKAISALSEEVNILKNLVGREVGLKHIYSGKVHVGM 316
WP_013798277 243 ETFISQCNLIKSIVEKKDREGFVKLMKEAAKHFGNEAKRgVSYSDKAVFALTKEMEKLSKMKGKEVGLKHIYSGNVHYGI 322
AAM07934     328 VKKVGPNEVILTklaskgtsphIKNKFIKLKLENLRLLSESELREWRREKLVHSVRDISVLIPEGADPEIVLGAVKTDKH 407
WP_011171458 320 LKEVYADNIVLK----------QNEKEVLLNISNVSLMEDKELEEWKIKNLEKYFVDISVLFKKDVDLNIILELLT---H 386
WP_011406665 325 VESVNATTVTLRd---------LKNNRITLKISNINILTENEIYEWKKNNLPIHEYDVSIIFPDTCSEDILLSMFSQIKP 395
WP_012955270 316 IKKIDLDFLYLEd---------ENGKVKKLKMSNVAILSEKELFEWKINNQKTYSRDISAMFTKNSNPHIIKDTLKLMED 386
WP_012956773 322 VRKVSSQTVTIEn---------ENNEEIELKISSIDIMDKDELFQWKKKNLKLESFDLTAKFPSSANEDYLLKMFKRIEP 392
WP_010870117 325 LKDIEDDYLILN----------KNGKEQKFNILRVEVFAGDELSKLKKKHLEKKYIDVSVLFKKDVDEEVILNLLK---K 391
WP_013413699 319 LKEVSPDFVVLK----------SRKMTLKLKTSNIRILNKKELQKWKIKKFGTKKFDISVIFPEKCDPNVIAKVVENEEG 388
WP_013866723 320 VKNVVDDFIILN----------KNGKDLKLNIANVMLMSNEELKEWKEQNLKKYYYDISILFKKEINLDIILKLLN---C 386
WP_013645633 317 LEELKPEFLVLK----------LNNSSTKLKLSNVEILTDKELKDWKINNYPLRSYDVSAVFPESADPEVVVATVQGLEG 386
WP_013798277 323 LKDVDGDYIIIE----------KNGKEIKLSTSNVMVMEEEELKKWKNENLPKYYRDISILFKKEVNENIILDLLK---N 389
AAM07934     408 LVACQISDIYDGTERTEdkneiretGRLGVTYRITIFGDCNadsvEAEVTALLCGLGCRVRE 469
WP_011171458 387 KFEIEVIDTYYGDKIDE--------NDLSATFRISSYEKEDlkklEETFNKIIENIGGKLRY 440
WP_011406665 396 VIDVNIKDVYNGKQIDD--------GFMSITFHYSVFNSEE----REVVEEYLRGIGGKIR- 444
WP_012955270 387 IIDVEIIDIYDGEPVKE--------DQISYTFKIEALSMEA----IKNCRDILIGFGGISR- 435
WP_012956773 393 VIDANII--FKDKEIEK--------DLRTYKFHYSLFNKQE----KDYVEKYIQGIGGILIK 440
WP_010870117 392 MFDIEIIDVYEGEKIEE--------GYKSITFRIYGYNKDElkniEKEFLKIIKNIGGKERF 445
WP_013413699 389 VISAKIIDVYKGEQIPQ--------GMVSITIRFEVLDKKY----YQNVKKLLEGLGAKIR- 437
WP_013866723 387 MFDIEIIDIYEGSNVKN--------GFKSVTFRIYSYKKDDlkilKKSFLEVIKNIGGINRY 440
WP_013645633 387 VVDAEVMDTYSGSQIPE--------GSISITLRYLVFDDDA----VLEVEKLLKGFGCQIR- 435
WP_013798277 390 KFDIEIIDVYEGEKIEE--------GFKSITFRIYAFENVEe--kEKEFLKIIENIGGRRRF 441
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