Conserved Protein Domain Family
COG4923

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COG4923: COG4923 
Predicted nuclease (RNAse H fold) [General function prediction only]
Statistics
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PSSM-Id: 443951
Aligned: 63 rows
Threshold Bit Score: 178.954
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010912206   1 MTs--------------------------aGVVLVGADGCKAGWIAVRRELGstprspgSAPSVEIFASFAALLAAS--P 52 
WP_013035385   1 MPqr-------------------------cVSPAVGVDGCRAGWVCAVAGDG---------LSVRVVADFDAVWDLAreR 46 
WP_007143694   1 M------------------------------TSHVGVDWASRGWLAVGTDGQ--------EWTARMHPSIHSVWFEH--R 40 
WP_070364471   1 M------------------------------ARAVGVDWAGNGWVTAVIPET-------GSPAVAFYPTVLNLWRAH--R 41 
WP_086888877   1 M--------------------------------YIGVDGCSAGWVAVQFDED-------GYEGTDLYEDIQELWTVHg-H 40 
WP_089673787   1 MSldntdvtgyyrrqscvgpmtdqrlagesTGRVVGVDGCAGGWFAVWTEPDe------HGFESGLYVDISALFEAH--G 72 
WP_103425073   1 M-------------------------------SVAGVDGCYDGWVAIVLEGT--------DATTVVEESFSAVWDEC--N 39 
WP_103427617   1 MRldgavgptdgr------slfrprasplsVSRYIGVDGCSGGWFAVAYDPDe------GPLDHGLYETFGAVVDTHvrS 68 
WP_119820331   1 M--------------------------------YLGVDGCPDGWIAIVYDVD-------EYAGSGLYTHVEALYEDYg-E 40 
WP_108382934   1 MVr---------------------------DWTHVGVDRDGDTWLAVGITAD--------RIEAYPYDSIDDLWDDH--A 43 
WP_010912206  53 DDAVVAVDMPIGLPEf-----------SSKGGRGPEALVRPLLG-ARQSSVFSIPSRAALY-------Sdisdfttieaw 113
WP_013035385  47 DARRVLVDIPIGLPE--------------SDRRACDRAARERLG-SRAATVFFAPVRSVLD-------A----------- 93 
WP_007143694  41 DADAILVDVPIGLPA--------------DHRRTCDREAKDFLGpDRANSVFWTPCRAAVE-------A----------- 88 
WP_070364471  42 EADRILIDIPIGLTE--------------TGKRACDLAAKRELA-GRQGSVFLTPTREAVY-------A----------- 88 
WP_086888877  41 AAEQILIDVPIGLRE------------NSNAKRPCDDAARKKLSpNRHSSVFPVPVRAAVH-------E----------- 90 
WP_089673787  73 DADRLLVDIPIGLES--------------STARDCDRIARRRLG-ARGTSVFPAPCRAVVEyrqqegeA----------- 126
WP_103425073  40 TCDSVLVDVPVGLVSgs---------kSSEYIRACDTAARKRIA--SPSSVFQVPIREAVD-------A----------- 90 
WP_103427617  69 DTDRLLVDIPIGLPE--------------TGRRRCDEEARERLG-SRASTVFFAPCRAVLG-------A----------- 115
WP_119820331  41 EAESILVDVPIGLRE------------HSNKKRPCDVAARRLLSpDRHASVFAPPVRAAVH-------A----------- 90 
WP_108382934  44 DAERIVVDVPIGLVGdlaaddpagsivDGDLERECDGRAREVVD-SRSASVFTPPARPTVR-------A----------- 104
WP_010912206 114 yAAHG-------RASEVARATsdPPRGVSIQAFGIFSKIREIDALLIAR---PDL-RGRVFESHPEVAFCRLNGdQAMQL 182
WP_013035385  94 -DSHE-------AASAANRER--TGAGLSIQAWHLVPKIREADAVLREA---SRA-RSRVFESHPELAFAAFAG-DPLPE 158
WP_007143694  89 -TTYE-------QAKEANQMR--RGDSLSSQAWGLIPRIQEVDRLLRDA---ETA-RQTILESHPDVCFTALSGgDPL-S 153
WP_070364471  89 -PNIE-------TAKERQRP---PEFSVQNQAWAIVPRIRELDGFLQAF---PEIpAETFREAHPELSFAGLNGgTPISA 154
WP_086888877  91 -GSYE-------DAKKTQEKR--TDGSLGVQSWGIADKIAELDSFLCETe--PDA-VGTIREAHPEVCFWALNDeSATEY 157
WP_089673787 127 -ATYE-------RANEMQREQ--LNSGISRQAWNITPKIAAMDTYLRAD---SPA--VDVYESHPELCFAALNDgYPIPQ 191
WP_103425073  91 -WKHAedarkrdAAREAQREV--TGRGLTSQALSLLDKIAEVDTFVGECsdvDDV-SNRLAESHPELCFTALNGgRPLSR 166
WP_103427617 116 -ADHE-------TASAVNRER--TGYGLSIQAWHLVPKIREVDAVLRSS---SAL-RETVSEAHPELCFAALGD-GPVAA 180
WP_119820331  91 -DSYE-------AAKRIQEER--TDGSLGVQSWGIADGIAQLDRFLRETh--SDA-VDIVREAHPEVAFWALAGeEATEY 157
WP_108382934 105 -AAETdag--haTLSRLNELA--TGKGLSIQAASIADVIGEVDELLRDT---AD--PSVLIEGHPEVAFRAFDE-GPLDH 173
WP_010912206 183 PKKikgsvN---PAGMAERKALLCRH---------------------------GYAMDFLDQPP-------------PRG 219
WP_013035385 159 PKS-----T---PEGRARRLDVLGTAfggcdgrngdgdddsddgseadatddrEFDAERAYRETldr--------tlRRD 222
WP_007143694 154 PKQ-----S---AAGETERIACLEEV---------------------------DDAVRPAYDRFvst--------yiEEQ 190
WP_070364471 155 SKG-----T---DAGREARLAALESH---------------------------DPTLVEAYERGvet--------ltKPS 191
WP_086888877 158 SKTg---kP---AAAFWERIGILEAI---------------------------DEAIIDDVRDAsl---------nlDAK 195
WP_089673787 192 PKS-----S---QRGRAARFGVFAEW---------------------------TAGWQSCYEDAlaa--------yyRKD 228
WP_103425073 167 SKA-----TrhsDAGLADRYDVLDDEf-------------------------eGDTATTLWEALcqcrnveaesdehTPE 216
WP_103427617 181 SKS-----T---PAGRDERLDRLRPW----------------------------VDADEVYESClda--------ylRRD 216
WP_119820331 158 SKTg---qP---AAAFVERVDRLEAI---------------------------DPDVSAHLRRAgr---------dlDAE 195
WP_108382934 174 SKH-----T---APGVAERLDRLGTV---------------------------RDEV--PWRRLarel------aaeGHD 210
WP_010912206 220 ---------AAADDFLDAAVMMLIAGRIASgSAKPFPNPP---------LADGF-G-----IPVAIWA 263
WP_013035385 223 ---------VARDDVLDALVLAAAARR----PLATLPSDP---------PTDAV-G-----LEMAIRV 262
WP_007143694 191 epwarrigaSNRDDLLDAMVLALTATLADG-EFETLPADP---------PTDQE-G-----LPMQIIY 242
WP_070364471 192 yapt--igaSKTDDILDALALAAAAAAGPE-ALTQLPETP---------QHDPVlD-----RPIEIVY 242
WP_086888877 196 ---------VGNDDVIDAFALALIASPKTG-PPRTLPDEW---------PDNDT-GdptdkLPMEMVY 243
WP_089673787 229 ---------VARDDIVDAMILCAAGQQ----PLASVPAEP---------PVDKR-G-----VPMQIVA 268
WP_103425073 217 ---------VTFDDVLDAFVLALTARQ----DTATLPPSP---------ESDCEiE-----WPMAMAY 257
WP_103427617 217 ---------VQRDDVLDALALALAASR----PLARVPPVPdg-----tvPRDPV-G-----LPMEIRY 260
WP_119820331 196 ---------VGVDDLVDAFALAVTASPLTG-DLRTLPDEWpd-----ddPGDPA-G-----LPMEMVY 242
WP_108382934 211 ---------AGLDDLLDALALAIVACAPDD-EFHRLPSRDasaestddlPRDDR-G-----LPMAIAY 262
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