Conserved Protein Domain Family
HofQ

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COG4796: HofQ (This model is not part of the current CDD release)
Type II secretion system/DNA uptake membrane channel ComE/HofQ [Intracellular trafficking, secretion, and vesicular transport]
Type II secretion system/DNA uptake membrane channel ComE/HofQ; is part of the Pathway/BioSystem: Type II secretion/Type IV pili
Statistics
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PSSM-Id: 512696
Aligned: 589 rows
Threshold Bit Score: 146.825
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_265901179  259 EIvPRLVLREAPVRDVLALLARAAGLNLAFSDSPQTgaspgggpegqntqaaaaaaqrT--ITLDIENEPVQDVFNYVIQ 336 
WP_011112168  185 KP-ITMEFRDTSLKTMFELISRTAGINFVFDRNVQQ----------------------EatASIFVRDNSIEDVLKLMLL 241 
WP_012701466  187 QP-VSLEFREANLKLVFEVLAQTAGMNFIFDQDVSP----------------------DlkATIYVRQVPIEEAVDLLLQ 243 
WP_195794800  188 KP-VTLEFRDAPLRQVFEALARSSSVNFVFDKDVRS----------------------DakVTVFLRQVSLDEAMRVILS 244 
WP_012348884  181 KP-VTLEFRDAPLKLVLEALARSAGINFIMDREVRP----------------------DlkASIFVRDVRVEDALDLLIH 237 
WP_264149523   37 fdlISITFYNTELTEALNELALQTGKTILMDEYVAG----------------------M--ITADFLDTPFEEVLKKILL 92  
WP_010954341  186 RP-VTLEFRDANLKTIFEVLSQVAGINFIFDKDLRP----------------------DmkATIFVREVRIEDAIALLLE 242 
WP_004102342   16 afsVDIYFYQTDIRDALNQLGMQEGVSIIYDPLISG----------------------F--ISVEAYNITLEKALDLMLL 71  
WP_012003913   21 eplVTNIFQDTYILDALADISAQSGVPIIADTTVSG----------------------F--VTIELNEVPLEKALKMILM 76  
WP_004080304   21 eplVSNIFQDTYILDALADISAQTGIPIIADTTVTG----------------------F--ITMELNEVPLEQALKMILM 76  
WP_265901179  337 LSGFQANR-IG-RTIFVGERlPLATR---DIA-ARTL--RLNQAQAAAAAAFLsaQgaetqrvvtrttrtvegtgidrre 408 
WP_011112168  242 TNQLAYKVlNS-NTLLIYPDtPAKQKdyqELV-VRSF--HVANTDVKQMVAMI--R------------------------ 291 
WP_012701466  244 QGQLKHKVvNE-NTVLIYPNtPQKLKdyqELV-LKTF--YLTNIDANTALNMV--K------------------------ 293 
WP_195794800  245 TQQLDRKLlND-SSVLIFPNtQAKQRehqELI-TRTL--YLTNADVKSAQAMV--R------------------------ 294 
WP_012348884  238 NHQLEKKIlTD-NTVLVYPNtPQKLRehqELV-MRTF--HIGNADPKQTLNLL--R------------------------ 287 
WP_264149523   93 PGGFSFKK-MDeKTYFVGIAdPRSKTft-yLAeKEVM--KLNYIDTQTFLQLL--P------------------------ 142 
WP_010954341  243 QNQLRQKIvND-NTVMVYPDsPQKTKdyqELV-MRTF--YLTSIDANTALNMV--K------------------------ 292 
WP_004102342   72 PLGYYWTK-ID-NVYFVGTAnPDSPNf--ALI-SKKYllNLRFITFDDLYNAL--P------------------------ 120 
WP_012003913   77 PGGYTFIK-VD-GFYFVGAPdPKNPAfr-yLVqTKVI--KPSYLKVDSIRNLL--P------------------------ 125 
WP_004080304   77 PGGYVFKK-MD-GFYLVGSPdPANPAfr-yLAvTKTY--KLKYITTADAQELL--P------------------------ 125 
WP_265901179  409 reetqttieplsasqqlstGplLLTGLsVVTDERLNQVTLIGDSRQVQIASALLKQQDLRKRQVAVNVKVVDVNLSSLEN 488 
WP_011112168  292 -------------------G--LVKardIYVNEKLNLFVIRDTLEMIRLVERLVAINDFPDPEVMLDVVVLEVKRDSTLD 350 
WP_012701466  294 -------------------T--LLKtrdVFVDERLNTLTMRDTPDAVHLAERLFLAQDQANPEVVLELEVMEVSRKRILD 352 
WP_195794800  295 -------------------T--IAKvrdIHIDERLNLMVVRDTPEVMRLVEKLIASIDLPEPEVMLEVEVLDVASDQVEA 353 
WP_012348884  288 -------------------T--MLKvrdVFIDERVNLLFLRDTPDVIRAAERLIAAQDKADPEVVLELEILEVSRTKVRD 346 
WP_264149523  143 -------------------V--SYQTY-AKVNQLNNSILFYAPKDILDYIKEVQDMVDIKIPDIKLNIYALEVEKRNYNI 200 
WP_010954341  293 -------------------T--MLKtrdVFVDERLNTLTMRDTSDAVRMAEKLLQSQDQSNPEVVLEVEVMEVATSRILD 351 
WP_004102342  121 -------------------K--IMTNY-IYKTPNKNQVLIYAPAKIASQIAETITLIDKQIPVAEIQVKIIEIDESDFKK 178 
WP_012003913  126 -------------------S--FYEPF-IKIDTENNLITITAPEQIIAKFEEDLKNIDIPPRQVKISVVVSEVSKDNLGE 183 
WP_004080304  126 -------------------A--VYKSY-VKFNEKNNMVTITAPEEIIQEFEEDLKKIDIPIPQVKISVIVTEVSKDYSNE 183 
WP_265901179  489 WNSSFsfGINDSffvVdngngtARFgqfapassndlnpalnpggrfgRPIvNNpvaGitpFdnpEgtelvrdpvtgqflr 568 
WP_011112168  351 LGPNM--PTS------------VTFsavpgi----------gtpaqaAAD-S----V---V---K--------------- 380 
WP_012701466  353 LGLQW--PNT------------FGIlae--------------------dgtS----A---V---Si-------------- 374 
WP_195794800  354 IGMKW--PEQ------------VSYgvp----------------------------------gvDg-------------- 371 
WP_012348884  347 LGITY--PSE------------FAgp-----------------------gsS----G---A---K--------------- 364 
WP_264149523  201 LKSNLf-KLTnl--------------------------------------anS---E---F---Kfe------------- 219 
WP_010954341  352 LGLQW--PNT------------FGVlsd-------------------------dgnP---V---Sv-------------- 372 
WP_004102342  179 FGVSW--NNEEN---N-------Tt-------------------------------S---Ynn----------------- 195 
WP_012003913  184 IGLDQi-GYTfg--------------------------------------anQ---Q---Y---Ned------------- 202 
WP_004080304  184 LGLNSl-DYSfg--------------------------------------sgQ---E---F---Nen------------- 202 
WP_265901179  569 arpnqpgsifgpggnplkpgadivsparlpadattgspqlffdrngiprayseltvgggryeplrssdnnliaagtgpqr 648 
WP_011112168      --------------------------------------------------------------------------------     
WP_012701466      --------------------------------------------------------------------------------     
WP_195794800      --------------------------------------------------------------------------------     
WP_012348884      --------------------------------------------------------------------------------     
WP_264149523      --------------------------------------------------------------------------------     
WP_010954341      --------------------------------------------------------------------------------     
WP_004102342      --------------------------------------------------------------------------------     
WP_012003913      --------------------------------------------------------------------------------     
WP_004080304      --------------------------------------------------------------------------------     
WP_265901179  649 fydengvarlfseltvgggkfkpllgpdsspiaapenslfldtagTprrfeeltigggnfparLddqgnpitatdnvaif 728 
WP_011112168  381 ---------------------------------------------Ms---------------mI---------------- 384 
WP_012701466  375 ---------------------------------------------Lg---------------qL---------------- 378 
WP_195794800  372 ---------------------------------------------Ai---------------dI---------------- 375 
WP_012348884  365 ---------------------------------------------Lf---------------eI---------------- 368 
WP_264149523      --------------------------------------------------------------------------------     
WP_010954341  373 ---------------------------------------------Ld---------------qL---------------- 376 
WP_004102342      --------------------------------------------------------------------------------     
WP_012003913      --------------------------------------------------------------------------------     
WP_004080304      --------------------------------------------------------------------------------     
WP_265901179  729 ldkngtprrfseltigggtfepfrnpagnlvattaaalapqffdvngiprlfseltvgggsfapllnpngapiparaaiq 808 
WP_011112168      --------------------------------------------------------------------------------     
WP_012701466      --------------------------------------------------------------------------------     
WP_195794800      --------------------------------------------------------------------------------     
WP_012348884      --------------------------------------------------------------------------------     
WP_264149523      --------------------------------------------------------------------------------     
WP_010954341      --------------------------------------------------------------------------------     
WP_004102342      --------------------------------------------------------------------------------     
WP_012003913      --------------------------------------------------------------------------------     
WP_004080304      --------------------------------------------------------------------------------     
WP_265901179  809 alpgfigeaaqvAYRLPq-VFQY-PRQFLAQLDAS----------VQTGNAKILTDPTLTVQEGETANVILADRVLTNVV 876 
WP_011112168  385 -------------KNTGfeGLRSfTISNQARIDFG----------RTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTV 441 
WP_012701466  379 -------------RGID--SDRInFS-PSPTLKIN----------ANDSDVNTLASPVLRVSNREQARIHIGERVPVVSA 432 
WP_195794800  376 -------------RNRG--NFRTtVANPAVSATLR----------GTSGNTSLLANPKIRVRNRDKAKVHIGQKLPVFTT 430 
WP_012348884  369 -------------GELN--RRTIgVD-TGYKLKLL----------RTDGDTKTLANPRVRVRNREKARVHVGDRVPVISS 422 
WP_264149523  220 ----------dsKIKLT--IPDL----LQTEIQMY----------ESNHMADLITNQSLNVKSGKTVNIEIKDKKNLIIS 273 
WP_010954341  377 -------------KGIN--SSRIsIA-PAPQAKIN----------AQDKDINTLASPVIRVSNREQARIHIGQRVPIISA 430 
WP_004102342  196 -----------gNLQLS--LNPLnv-nFNIIMDTL----------ISSGNAKVLAEGTLKLKSNSTSQITGYTTVGFTI- 250 
WP_012003913  203 ----------wtAVLGL--ISGV----LSVQTDVFgtivarlralEQDQKAKIKADPWIIVQENKPARLFVGQREIIILQ 266 
WP_004080304  203 ----------wsATLGL--VTGI----IDVQTDVFgqilaqlkllEEDQKAKITADPWIIVKSGEKASLFLGERQVVLLQ 266 
WP_265901179  877 ETispaT--------AtvaaTvaINNEFTD--VGLTLSVEvQKIDDNG-FVTLNVRPV---IST--PTGsQevaTSttps 940 
WP_011112168  442 TN----T--------AnvgsA--ASATYID--VGLKFEVE-PVVRTNN-EVTLKALLE---VSS--NLGeKrsgSGena- 497 
WP_012701466  433 TS----Tps-----tQgpviT--ENITYLD--VGLKLEVE-PTIHLND-EVAIKVGLE---VSN--ATQlTrteAGti-- 490 
WP_195794800  431 TTn--fT--------GatsvA--ASVSYLD--VGLKLDVE-PTIQLDN-DVVIKVGLE---VSN--MIReVkgpGGtt-- 487 
WP_012348884  423 TI----VgttnlgsnNtpvtT--EQIQYLD--VGIKIEAE-PTIYADD-SVAISINLD---VSS--LGNqTrtnAGtt-- 485 
WP_264149523  274 SS----D--------N----K--KTVNTLD--SGLGITLT-PTYFNK--RIQIEFKSN---FSKi-SGId----QTs--- 319 
WP_010954341  431 TS----Vps-----tQgpviT--ESVTYLD--VGLKLEVQ-PTVHLNN-EVAIKVALE---VSN--ATPlEatrQGti-- 488 
WP_004102342  251 ---------------Gk--dN--T---YVEkkINTQIIIS-GHVFTDHaNLTLKSIVEsfiQNS----St---fT----- 295 
WP_012003913  267 PE----E--------G----T--TTTETVD--VGVGIDIT-ARVVGKN-ELEINVAPN---ISHftTAQt----TSs--- 314 
WP_004080304  267 AE----G--------A----V--SRIESID--VGVSIDIQ-PRVMDKE-ELELTLSPK---VSHf-AGEk----LGt--- 313 
WP_265901179  941 gtiavARVARRElNSGSIRIRDGQTLILAGIISEQDRELVKKVPVLGDLPIVGALFRSRQADKSRNEVVIVLTPHILDDs 1020
WP_011112168  498 --ataIVIGTRT-AETVLELRDGETQVLAGLIQDDLSRVRSGIAGLTDIPVLGDIFSKQVRKHNKTEIILLITPHIVRNv 574 
WP_012701466  491 ----pIQVDTRN-AVTTLRLRNGETQVLAGLMRNDQGKSGDRIPGLGDIPGIGRLFGSNKDTLSKSELVLSITPRIVRNl 565 
WP_195794800  488 ----aYEIGTRQ-TSTSLRLNDGETQVLAGLINDEDRKSANGVPGLSGLPVLGKLFGVQSDTRNKTEVVLLITPRIVRNt 562 
WP_012348884  486 ----aYEVGTRN-ASTVLRLRDGETQALMGLIRDDDVQTGAGLPYLGEFPVLDRIFGSKRTDRRSRELVLLITPQLVRGi 560 
WP_264149523  320 -----FNTSNSI-LETKVDLNPDEVLLIADLDLNQFYNTQAGVEILHTLPIIRLFFSDDEKMDLNKRLMIFLSASIDYSg 393 
WP_010954341  489 ----pVQVDTRN-AQTSLRLHDGETQVLAGLVRNDHNASGNKIPGLGDIPGLGRLFGSNKDDMSKSELVLAITPRIVRNl 563 
WP_004102342  296 ------PV-GAS-VETNLDIKYEQPYYIAGLSFDSVTKQDGGIPGLKDIPIIGNLFKNSTYTSRKKNIVIFIKARLAGEd 367 
WP_012003913  315 -----LSTKRSE-LSTTLRIQSGQTVVISGLTVENSSDGYTGIPLLGNIPLLRYLFGVKSDSQSQREVIIFLSAEIL--- 385 
WP_004080304  314 -----FAVKQNE-LSTTLFLKNGQTVVISGATIEDSAQTSSGVPILNKIPLIRYLFGGTTKKDSQKELYIFIKAEIQGSe 387 
WP_265901179 1021 ------------------------------------dRA 1023
WP_011112168  575 iqpnhfesefysgtasaagklpvtirktaprslamesSN 613 
WP_012701466  566 pyqnpydmefesgtesslrlrpaalprkagaalrgqaSE 604 
WP_195794800  563 avpdvgltrlpggtdaspgafssrlrdqaragvglagag 601 
WP_012348884  561 epadatlaefwsgteaavrtrspfiepmtpvalgpatAT 599 
WP_264149523  394 d----------------------------------dlN- 397 
WP_010954341  564 pyqspsdmefstgtesamqvrqmaplppmdvpgnaptTE 602 
WP_004102342  368 l-------------------------------------- 368 
WP_012003913      ---------------------------------------     
WP_004080304      ---------------------------------------     
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