Conserved Protein Domain Family
ArnR

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COG4742: ArnR (This model is not part of the current CDD release)
Transcriptional regulator of archaellar expression ArnR [Transcription, Cell motility]
Transcriptional regulator of archaellar expression ArnR; is part of the Pathway/BioSystem: Archaella
Statistics
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PSSM-Id: 512688
Aligned: 449 rows
Threshold Bit Score: 80.7046
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_254538687  22 Vt-----aDSLAYL--AGAA-YRGPLL-QEFDSVE-T-MSPTEIDCTdnlsdeeSPSPSTISRARAKFESHGWLTRE--- 87 
WP_148695277   1 Mhdd-iiqETSRLLg-ILAKhDSLTLFlESV-EGI-D-ASTDTPARL-------GMSKKQYYTRLKQLIGAGLITKS--- 65 
WP_103286811   1 Mede-vlrEASKVLt-ILSKyDALKIFlQSV-EGI-E-AETDAPEKI-------GLTKKQYYTRLKQLVDTGLIEKS--- 65 
WP_147664421   1 Mse----kFPLDLIndILHP-KRIELL-QKLSEQD-E-SFSELSKSL-------KISSSEMSRHLNSLTEKKLVEKSp-k 64 
AIY90898       1 Mg-----fDSISKE--LVKE-EKVRIL-ESLMGKP-C-TFREILNIN-------GYAPSTLSRTLTIFEEEGLVRRE--- 59 
UCE10494       1 Msdd--ylDRILGA--LRSQ-TRRRIL-ELLLDNShGlRFSEIGRTL-------NVYPSTLEKHLTRLVKDEVIAHE--- 64 
UJG44397       1 Mtv----fGSLLST--FANL-NRKNIL-ELLNVTS-S-TMTDLAKKL-------EISNSEVSRHLSMLSEHGFVIKNa-r 62 
UYP44785       1 MlpklinlEKILLE--VMNP-IRIQIL-QILNEED-Q-NLSKLATKIg------LVSNSEISRHLSRLGEQSLIRKEret 68 
UYP45628       1 Mqd---twKQVLAD--ICHP-TRLQIL-SIVQKSP-S-NFSNIATQV-------ALSNSEVSRHLNRLFDQGVLEKDa-k 63 
WP_014962760   1 Mvs----gAELILE--LSSS-QRMDIL-QLLSATN-L-KASEIAKKL-------NTSIQAISRHVDRLHAAKLIEKNe-- 61 
WP_254538687  88 GTSYQLTTQGERVVESYETLLTACEQ---IIDKTPTLR-----DL-DPAv----AELPVHT----LQ------DATQVVS 144
WP_148695277  66 KGKYVQTTMGRMLYERCLKLVfe-----qVRNAKKLIMa---------DilkdsGRFDMDEiyrlLQikvengNARLITD 131
WP_103286811  66 KGRYVQTTLGRIIYEKALQVLfe-----hVRNAKKLQMl---------DvlkssGKFDMDEiyrlLSikvgedKAKVFME 131
WP_147664421  65 SKKYNLSSLGSAIISLLQPIRf-------IFINHNFFQnhgfhGL-PPHll-----sNLHA----LD------GSELISG 121
AIY90898      60 DEKYCLTGAGLAFLKVIDVIKAVYEFkddINGVPEFVE-----IL-PPGfl-----aGIHN----LR------RAEVMDI 118
UCE10494      65 SNRYMPTLNSGLIWKALGNFRTIPKH--------PYFSnh-tlLLdDENlq------------reFRs----lNFDVITD 119
UJG44397      63 DNKYSISAFGRLSLTVVKPLDf-------IFSHKQFFEnhiftTL-EEDfv-----kTLDS----LS------DSELIEG 119
UYP44785      69 GRYYQITAFGKAIMNSLDNFVf-------LSINSDYFTdhsiaDI-PLSlq-----sQISV----LQ------NAEIISG 125
UYP45628      64 SRQISLTKYGALIHHSLQPLHf-------FCEFKHIFTlhdilDL-PEFll-----aDLPL----LK------NAVFIKG 120
WP_014962760  62 DGIYKLTVIGNALLHQYPFFEf-------LGKYRDYFEthdfsGV-PDHll-----vRIGD----LL------NCDLETN 118
WP_254538687 145 tpdspFDAVNAFFKLPEvEhlaF-E-RLRGFNSF-------FDM-RYARAFEPAI--DAGKQMELIMP-------ASMMS 205
WP_148695277 132 y----DMLIDVLQERMK-D---VkN-QAWYATRy-------FNE-YIVSKAIELH--RRGVDVRILVD-------RALVE 185
WP_103286811 132 y----GELTNVLVEKMN-N---AsN-EVLYATRF-------FNE-HIINEIIELH--KRGVNVRMIID-------RMLIE 185
WP_147664421 122 t----GSVMMRVSDYFEl----VqK-EIKVMTNQp-------FPw-----------gKPGLNVSYLVP-------ESFL- 166
AIY90898     119 -----ESALKLGVERIA-E---A-K-EYGLYVDK-------VISyDVYKLMVEKNl--qGVEERVISNretlygrGSTFR 178
UCE10494     120 i----ISIVNRIKEDFE-K---PqN-SIQAGGAMdhdlgkgI--------YGSGMlsHKDVNVEIILT-------TQLID 175
UJG44397     120 t----GKVMMNIKQAFD-E---TkE-RALIITDQ-------MLPf-----------gKEGISCKYLVT-------PEMV- 164
UYP44785     126 t----GNVMHKIKEFMEl----PiK-KLRIIVDSg-------YPf-----------lNTEAEISVIVP-------ESMN- 170
UYP45628     121 t----GPVMFKMQEITE-R---AqK-SLKMMVDQp-------FPf-----------gKAGISVEFIVP-------PSLV- 165
WP_014962760 119 t----MKALQRSRDWAA-S---M-EkWVKGVTFTi-----pL---EYYETVSKSM--RNGATHKIVFG-------KNSVv 172
WP_254538687 206 EIP-TS------GAE--A-QfaqKCMGA---EHIQS--QMYPG-ELPAGLTVFdrD-RVAIGAR-G--PA-RankERa-G 263
WP_148695277 186 KYI-SEy----mGMS----K---HGTSKyelERFkmftdpfypdklerkivdvpfsfiildgryvgielvnvnnpnkfya 253
WP_103286811 186 GQR-EKv----vKQE--Y-K-----------ERMMV-------------------------------------------T 203
WP_147664421 167 ----Kf------KDE--Y-Q---DAIKVn--LETKI--RIISD--LSFCILLSdiP-GGFLFFP-Nl-D--GvpdFNegF 219
AIY90898     179 KVL-QDmn--ltKEEyeLiK-----------RKVHV--KVF---DTPIQLGVIdgE-FAILQLN-DrvD----------R 227
UCE10494     176 EIQ-GR------GEEt-Lf---lSQFDT---KKTSL--FSVEDcD--FGLGVGd-D-AGLLFLP-Rl-Dlt--vdFH--Q 229
UJG44397     165 ----Ky------SEN--V-P---QTVKI---EGAAFl----ND--LPLGLLILdnK-KALVFFK-Nl--N-NemdYN--Y 212
UYP44785     171 --TtEN------QEDpsL-------------KSFKI--GLLPS--VPITMALCdlE-IGIIAFPrE--SE-NnpdVS--K 219
UYP45628     166 ----Am------RDK--I-Ek----------SSLTIdaRLYDF--VRYSICITd-NgEALLFLPkN--ETnp--dFEscF 215
WP_014962760 173 ---pNGyydhprRKE--W-E---QYIES---GQIQE--KIVES--VPLVVGLSe-K-EAHLIFA-N--KKlGypdIK--G 229
WP_254538687 264 SIYSANEELIEWALDLYDTYRV--DS-Ep----PLrhlftriR 299
WP_148695277 254 giyieneyiasqmkslfetlytsanivsknr------------ 284
WP_103286811 204 TV-------------------------------PFypenvdrk 215
WP_147664421 220 YISPQNQTAFQFLHDLWGYFWElgVSpKd-------------- 248
AIY90898     228 FYVSEDKRFITWCEHLFTYLWD--NA-EdarfnKIvde-vmaE 266
UCE10494     230 CLYSHGPNEVAWLKKLFKHLKR--QS-R-----PFil------ 258
UJG44397     213 CFIVEDERGLRWVSKIWEFYWK--KA-K-----KVl------- 240
UYP44785     220 CFYIQDPQGIKFLEQIWVFFWD--KA-Q-----KIsn------ 248
UYP45628     216 YVSSSQNPAFLFICQLWDYFWN--NG-K-----KIeei----- 245
WP_014962760 230 IFFSKDPKFRKWCEDLVDYYWTlpEI-Kn---fKLvek----- 263
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