Conserved Protein Domain Family
COG4688

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COG4688: COG4688 (This model is not part of the current CDD release)
Predicted site-specific recombinase/integrase [Replication, recombination and repair]
Statistics
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PSSM-Id: 512685
Aligned: 37 rows
Threshold Bit Score: 317.37
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_157668221 158 VVRKLFDHQHLALRPNLASS-CTPYADAdslaaqaltdaanartnskgyrSNSILKHpNERKEASKLPDHRAFWELCRIV 236
WP_123956070 152 LFDFCRENQITPQLPLWENP-YKRPRDL----------------------TILLDEK-GKEYRSSKMPTDEEMMLVAKLF 207
WP_087489833 166 FAAHCDANGLCRVLLQYKYAkMKRPASTgg------------------isHKRLDDPvVLETKSDKLVDPAVFRVIGELY 227
WP_049639589 158 LCKWLIEKEILPNLLGWKNP-FNRGRDK----------------------IEQLDDE-SKKWREERCPTMHQMLSLADCF 213
WP_041938082 153 LYAFLYEKTIAPTIPQWVNP-WPRGKAK----------------------AERTDKE-SRDWQQERCPSLHQMTAIADCF 208
WP_013294340 154 LANFLREKAICPSLPIWTNP-YPRQRFR----------------------AQGTTAE-DKAWQEERCPSIHQMLALADIF 209
WP_261403303 160 IAGWVDRFGVGRTRIEFRNPiIKRPDGT----------------------EGRLDAA-ARERREEKLPTDASLNALARLA 216
WP_242152003 162 IQGILNNLNLTLSPLLHTNK-HKLNNTYnkink------------qkillKTNVVDD-LAYEGDDKLISFDAFRAYAWIT 227
WP_148218093 154 ISKVIDERRLTARPIGYETR-LKRPLDG-----------------------DELTEE-GQAEGMKKMISQEALDKLAEIF 208
WP_010907417 152 LFDFCRENQITPQLPLWKSP-YKRPRDL----------------------TILLDEK-GKEYRSSKMPTDEEMMLVAKLF 207
WP_157668221 237 FTeEPRSLHDLQLFACARLHIITGLRAAEIALLPYNWEKWREwtdid--gnpagLkGGITRSLAIRHFAGKQGAKSKggg 314
WP_123956070 208 HDaPNLDKETEYYTAVMALLMVAPSRCSELMSLSVNCLEWEN------------D-SLGNKQLGIRWIPAKNGKVGL--- 271
WP_087489833 228 SKv-PKDHKYRFYILMLTLLVCTGRRFSEISLLPNQQLSFDD-----------------EGNRYIEYFPRKASRGDAftp 289
WP_049639589 214 AR--AVTVKDQFYTSVLVLLCFAPGRGDEINNLTINSLQEED------------------GRYYVSWYSGKGYGDTK--- 270
WP_041938082 209 SR--AETNEDKYWSSVLTLLMFAPSRAGELLSLVVDCLHISE-----------------SGHLGIRWYGEKGFGDTI--- 266
WP_013294340 210 RM--AEEEYDQYWSSVIVLLMFAPGRGSEPGSLMVDSLIEED------------------GRLKVLWFPKKKAEWTK--- 266
WP_261403303 217 NL--VTEDVDILRIRVIELLVCGGWRINELLSIPANCEVEEAayrdg--kpvldDkGDPVVRYGIRYWAEKGAPPAP--- 289
WP_242152003 228 NN--TRNKCELLGCRIVDILFATGMRINEILYLPRDCWVEREieseshldsikdlnNKSLKMYGLRYFSEKNSDAYI--- 302
WP_148218093 209 AN--PGSDYERLIISIVGLFVVGGFRAGEVLTIPVDCWQHQLqqgd----sldpKtGVILGNHGILYAAEKAQDYRI--- 279
WP_010907417 208 HDaPNLDKETEYYTAVMALLMVAPSRCSELMSLSVNCLEWEN------------D-SLGNKQLGIRWIPAKNGKVGL--- 271
WP_157668221 315 trqlvpklQDVPKMFEDIVLDTLHEVENATLPLRRTYGDQIASgr---------lfPDLPIDALVPIWEVYVRVfgniqi 385
WP_123956070 272 --------KWVPSCMQDIVVEAVKRLTSIGSLARGVAKFSEENpnilmlsnkeaapSHFLYQKPLTNSEIAEVL------ 337
WP_087489833 290 -----krrLYLPSEVTLIVRDVLVELEEITYQARSTAEEMHKVggpd-----irflDTIQEGEKLYAADLKEL------- 352
WP_049639589 271 --------KWVPTVMVDIVKEAFQRLIEIGKPARDAAKFAFDNpdqfmlhedcittPEFDEGTPLTVAQFAKAM------ 336
WP_041938082 267 --------KWVPEVMKDAVIEAHRRLVEIGAPARAAAKFAHDNpgifyrhegcitpPDFPENRTLNALEFACAM------ 332
WP_013294340 267 --------KIVPVQLEPVVRDAFARLIKIGKSARIAAKFAFENpgkfmrhsrcitpVDFGEDEPLDVLQFSCAM------ 332
WP_261403303 290 --------KWIPSALVDVARRAIADIRRITEPTREAAAYAARHpwgvk----veglDDGDPECLIECSAVGALL------ 351
WP_242152003 303 --------HWIEPNAVSIVKRAIQDILELTYDYHLQAKFLVENegaril-------nkdifRDEVSLFDVLEKL------ 361
WP_148218093 280 --------KWLPKDAVEMARRCVDDLTRLCQLARETAAWMEASpgrlk------pfadlEPTDWISGHEACERL------ 339
WP_010907417 272 --------KWVPSCMQDIVVEAVKRLTNIGTLARGVAKFAEENpnilmlsnkeaapSRSLYQKPLTKSEIFEVL------ 337
WP_157668221 386 ashpipkelltrykqGsfhnnfekrnfrFDPSAldei--------rfqQMRAlgladsnipteplnwkigQYFSDsrski 457
WP_123956070 338 ---------------D------------IDPQN---------------ICNT------------------KWCKN----- 352
WP_087489833 353 ---------------G------------ISHTVlg---------------------------------atGWLRKrn--- 369
WP_049639589 337 ---------------G------------LNhlshsgg-----tlrwqnFTQK-------------------WIvdl---- 361
WP_041938082 333 ---------------N------------FAPSKlklleslgartndlnSCTAwsll-----------glgKWIkkl---- 370
WP_013294340 333 ---------------N------------YADVTieklkirqqegkdlqGDDAwrvin---------pnpiKWLenm---- 372
WP_261403303 352 ---------------G------------Mth----------------rTSGL------------------QWCRSwsv-- 368
WP_242152003 362 ----------------------------FETNRf-----------------------------------fKWFEPkkgrk 378
WP_148218093 340 ---------------G------------FAKQThv---------------------------------nwKIFREnra-- 357
WP_010907417 338 ---------------D------------ID-KN---------------STNT------------------KWFKN----- 351
WP_157668221 458 ----------------------------------------sssfFRDETGSFFrperaewgrihfRVGEVEAELSRKGFR 497
WP_123956070 353 --------------------------------------------LISENDGSI------------TYEVLGKFLYKKYTS 376
WP_087489833 370 ----------------------------------------------------------------lTWPDHSALTKRGIKP 385
WP_049639589 362 -----------------------------------------------rkTGDI------------TYNRLGKLVQAQYKT 382
WP_041938082 371 -----------------------------------------------rvHGNP------------TYQQLAQYTLSEYSS 391
WP_013294340 373 -----------------------------------------------raSGPV------------TYRRLAELTHDKYCT 393
WP_261403303 369 ------------------------------------------plVQSAVGMSA------------TRRDVSRVIRREMPQ 394
WP_242152003 379 knllillkesvehwcslnnispirmidvkvrfsieenrfindptLRHSTSIPIy-----------KVEDWENALKKHf-- 445
WP_148218093 358 ------------------------------------------tvGRAGRAAWY------------RVGDIEQWFNSNs-- 381
WP_010907417 352 --------------------------------------------LISENDGII------------TYEVLGKFLYKKYTS 375
WP_157668221 498 ktlLEPSMp-------vHSED-----AIAPHQFLFLTAYDKGGIRTdtntfdAAKFFAVRRF-NTDEVTLALGNSKN--- 561
WP_123956070 377 kfhNWPYV---------DKHK-----NVKVSEALLLFRENEFHDDF------SPKSFSFVLP-TVNQINDRFCYSET--- 432
WP_087489833 386 ---ANPIFft------yKSGLveyccRNCSEEYLSAFHTDQFGKEY------YLQDLLFIRP---------LGLSSGsya 441
WP_049639589 383 r--SWPKN---------PKT------GRPVWESLCLVRENELHEDF------QLKKFSWTSV-SVNQINDQLGKRIKn-- 436
WP_041938082 392 k--DWPSL---------PDT------DGAIWDSLLLVRDREFHNDF------KPLDFSWVIP-SVNQINWQLAPRTGl-- 445
WP_013294340 394 h--SWPNM---------PRS------NRPVWDSLLLVLDMQFHADF------LPKQFSWVIP-NINALNCELGGRDYqsn 449
WP_261403303 395 ---VPP-------------DS-----PLRLDEHLFLIPQNFTHPGR------TSIPGSVRFL-TDGMIGLFITGKEG--- 443
WP_242152003 446 ---NNPKQflhfnfkirNAES-----KVRLDELLLVAPLGSTNVNN------AIRLLPVVEPiSYQSISKFLSsn----- 506
WP_148218093 382 --vIDPVMt-------mPSGR-----TQRLSETLVVVFRNQFHGNR------PALSFIPELM-THSVLSGEISPAPSq-- 438
WP_010907417 376 kfhNWPYV---------DKHK-----NVKVSEALLLFRENEFHDDF------SPKSFSFVLP-TVNQINDRFCYSET--- 431
WP_157668221 562 --------IRHLTLFSRY-----GRNDED--RSLYLETHSLRHLQNTELFRKGLADAIITKRFDRVSVQQSYVYDHRSLA 626
WP_123956070 433 --------RPKTSLWEKH-----CIGTSKg-EFIRLPSHNARHWLSTKAERGGMDELTLANWAGRARVADNKAYDHRTEE 498
WP_087489833 442 hwmatsctQSMFTTFLRYfpelaAEYASSr-IEVDFTSHHFRHTLNTLLDEGGLSDLLQTEWFGRTNPRDTKAYQHTSRE 520
WP_049639589 437 ----------kSTLWERF-----GIKDEDg-SEISITSHQLRVWLNTHAMNGGMDDYLLAMWSGRADVTQNRAYDGRTES 500
WP_041938082 446 -------kNPGKTIFQRF-----GIVNEDs-SDIELTSHEPRVWLSTNAERGGMDSWQLAKWAGRARIEDNPHYDLRPAE 512
WP_013294340 450 s----gkkLRIKSIFDRF-----NKVDEDgkTPIMLTSHQPRVWLSTWAERGGMSAWLLAQWAGRANKNDNKAYKFLTKE 520
WP_261403303 444 ----------APSIFERF-----GMVEDDg-SPIRMNSHQLRHWLNTLAQAGGMSQMEIARWSGRKDVRQNAAYDHVSGA 507
WP_242152003 507 ------gkNNNQNIFDVH-----KLYEADg-NRININTHFMRHNINTFLALENISEHQQAIMMGRKDIRQNKAYQHLPEE 574
WP_148218093 439 -------eGDRIGILSRH-----G---------LRVTTKQFRHWLNTLADRGGLNGIELAKWMGRLEISQNAAYKHGTLA 497
WP_010907417 432 --------RPKTSLWEKH-----CIGTSKg-EFIRLPSHNARHWLSTKAERGGMDELTLANWAGRARVADNKAYDHRTEE 497
WP_157668221 627 EHLDNIdisddieerlgaKasttyRLILSGRvs----gPLVDRFQKiqv------------------------------- 671
WP_123956070 499 EKSESV------------R-----NLLIPEDi-----sILDKIHLN---------------------------------- 522
WP_087489833 521 KRALML------------R-----EDIKKGLvg----gLLVEQIKV---------------------------------- 545
WP_049639589 501 EKDRLK------------N-----KVMEIDHksp--ptALALFSDR---------------------------------- 527
WP_041938082 513 EREAQA------------R-----DIMLLTEmp----sALEALKLN---------------------------------- 537
WP_013294340 521 EKDKAA------------K-----DVIRHNQap----tSLEAVRLN---------------------------------- 545
WP_261403303 508 ELAGKV------------R-----KLVENGEmr----gPLAEAHERl--------------------------------- 533
WP_242152003 575 HHYQLQs-----------Rf----QINKQKEsdtpkegEIEALITNpldhlstepmlfseqlnleknvqrafhsldssiq 639
WP_148218093 498 IRTEAA------------Q-----SVIRAGDae----gTIPRIYRSl--------------------------------- 523
WP_010907417 498 EKSESV------------R-----NLLIPEDi-----sILDKIHLN---------------------------------- 521
WP_157668221 672 ---------------------------eeGD-DQAFEFLVAEADGLHATPYGFCLNSFTVDPCPNHL--EC-FNGC--LH 718
WP_123956070 523 -----------------------------LP-ITYEDLGKDRIGIATVTEIGICEHDYAMSPCSRHG--DC-ETCK--EL 567
WP_087489833 546 -----------------------------IPlEVQDAILKARIQAVHDVGTGICIHNFSQTPCERHL--QCsADCKdyvw 594
WP_049639589 528 -----------------------------LP-VPLPSLGVNREGVADFTGIGFCVHNFAQTPCTKTG--EC-ITCK--EH 572
WP_041938082 538 -----------------------------LP-VSYQNLGLNRIGIADVTEYGMCTHDYAMSPCIKGG--EC-MTCK--DH 582
WP_013294340 546 -----------------------------LP-VTYESLGIDRPGVAHPTLYGFCVRDWAMAPCLKGGgeAC-ASCD--DH 592
WP_261403303 534 -----------------------------PP-RDRASFRQTQIATAHLTEIGLCLHDWSLLPCTKHG--SC-PDCT--EH 578
WP_242152003 640 tkeltlslcennlllnelqntyneienssGP-QSAKEFINTHGGSLHIVPNGACTRNIALHGCHKRM--KC-ISGDgcSN 715
WP_148218093 524 -----------------------------PP-ADREAFLKASITAAHAMSFGMCVHNFAQSPCPNCN--QClRKCpeyir 571
WP_010907417 522 -----------------------------LP-ITYEDLGKDRIGIATVTEIGICEHDYAMSPCSRHG--DC-ETCK--EL 566
WP_157668221 719 LARTDLPSEQQRLTTLRARTANILQKARDCPGGS-VGRRNQIAHAQNRLDNIDKALATAPGDQPf----------PDGSD 787
WP_123956070 568 VCIKGLEHSLEILKVREAQITEQFNKAKEHHKIGvFGADRWISNLGWRLTHIKTKIKFLENESI-----------PNGSL 636
WP_087489833 595 vkddkgrlddqkrqyamaalarknaekqlisnkpkksadwlahndkklktlavqladngvehfdpekylnevehg----- 669
WP_049639589 573 VCMKGLPDTLENLEQMELLIAEQLESAKAAATDLtFGADRWVTHLGWKFAHIRTIIENLKNPDV-----------PNGSI 641
WP_041938082 583 VCIKGMPKTLERIKQLEERVASQFEKAKVDGADGtFGADRWVTHLGWKLVHIKAQRTRLESDDT-----------PDGAI 651
WP_013294340 593 KCIKGLDDKLENLESLESGLSRELSRAALQLDVKtFGADSWFRFLGFRLGKIRAIISRLKDLDT-----------PEGAH 661
WP_261403303 579 cvkkgdagqcgaaerllaetnallesaaveadertygaarwveahrrtargleaivavhhdpsipngtlvqiarp----- 653
WP_242152003 716 LTVTGRIGELSNIKTTINNMRNNIIKLENLQEKDpQYSRALIEQQSDLInm----eKVLNKAELaaqnnlklyvfDNGNN 791
WP_148218093 572 ikgdmeqrqallemkaleernlqraqaalcdsdgkggyygadrwvtwsketlagidealavddddaissgsqtrvfeetr 651
WP_010907417 567 VCIKGLEHSLEILKVREAQITEQFNKAKEHHKIGvFGADRWISNLGWRLTHIKTKIKFLENESI-----------PNGSL 635
WP_157668221 788 LSNPVDVIARatt------------vdRAPPLNDFNS 812
WP_123956070 637 LRMPDEYDPSpiklallergmdldiqkKETAKLDDDL 673
WP_087489833     -------------------------------------    
WP_049639589 642 IRIPVAHDPSptrralya---kgqttelNSTVVDNNh 675
WP_041938082 652 LCIPPEHDPSpikraleq--gnyrvspnENGLVDIST 686
WP_013294340 662 VCVPPELDPSplqrarsa--vvpeasdaDQQSVRSSM 696
WP_261403303     -------------------------------------    
WP_242152003 792 YSANQRPTMLvd--------------lFRNAIDNQDS 814
WP_148218093 652 qigd--------------------------------- 655
WP_010907417 636 LRMPDEYDPSpiklallergmdldiqkKETAKLDDDL 672
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