Conserved Protein Domain Family
RnfD

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COG4658: RnfD 
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfD subunit [Energy production and conversion]
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfD subunit is part of the Pathway/BioSystem: Na+-translocating Fd:NADH oxidoreductase
Statistics
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PSSM-Id: 443696
Aligned: 333 rows
Threshold Bit Score: 224.997
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_072549637  14 IASSPFTHQQQNTSNIMKWVMLACIPGIFALTYFFGYGSLIQVLLAMLTAWLTEGVVLHLRkpnlrkrhlqqqnghKQPv 93 
WP_012176243  10 VSHAPFWHDGSSLSARHYNILLVALIPVIAGILTYGVPALAVVCLSVSTAILWELLINRVS---------------KTP- 73 
WP_015905050   9 VSHAPFWHDGDTIATMNVNIILAALPAAIFGVLTFGAPALGVLALATSTAMLWELAFNFIS---------------KRA- 72 
WP_012547868  10 VSSSPHIFTHEDTSYAMKQVIFALLPATLGGIYFFGIYSLIVIIVSVISSVLWEALALYIR---------------RKP- 73 
WP_015949080   9 VSYAPHCHNGDRISKKSYNMMLAALPAVFFGILQYGIAALSVICLCVSTAMAWELIFNRIM---------------KQP- 72 
WP_015750984   8 VSAVPHAHSGNTLQKMMRQILLALIPALLIGVAYYGFGVVQVAAIAVVSALVWQVLLQKAM---------------HKP- 71 
WP_013258566   8 VSTSPHMLGGMSVRSMHVEYIIALIPALATGVYYFGWPALLTVLLATGSAVVCELALTKLA---------------KQP- 71 
WP_014956533   8 VSHAPFWHDGDSLFQMNLNIMIATIPAILFGIIQFGAPAFGVLSLSLSSAMIWELIMNLVS---------------KKK- 71 
WP_081719448  25 AAALPHYSGAISAARGMWMMSALLLPLLIWGVLIFGLYSLAVVILAVFSTLAGELLGMIFT---------------RRSs 89 
WP_128744153   5 NAGSPYIKGEFTVFSMMRSVLLALLALLIIPVIRYGPRPLVAAGASMLTAVFCHILFCLIR---------------GKS- 68 
WP_072549637  94 ------mACL-KDNSALLTGLLLGVSLPP-------LAPWWVVVLGTLFAIIIAKQLYGGLGQNLFNPAMVGYVVLLISF 159
WP_012176243  74 -------VSV-GDGNAALVGLLLAMLLPA-------TTPWWMVITGTFVAIVIAKQIFGGLGANPFNPALISLAILGVSW 138
WP_015905050  73 -------ITI-ADLDAAVIGLFVGMMLPA-------TTPWWMVLTGTFFAVVVGKQIYGGIGANPFNPAVIGIAVLLVAW 137
WP_012547868  74 -------LTIlKDYSAVVTGLLLALILPP-------NVPLWIPIIGTGVAILLAKQVFGGIGENFLNPALVGRAFLLSSY 139
WP_015949080  73 -------PTI-GDGNAALTGLLLGMLMPP-------VVPWWVILTMTFVTILIGKVIWGGMGGNPFNPVILGYAITRLSW 137
WP_015750984  72 -------VCL-ANMTTVVSALLLAMIMPP-------GLPWWAVCVGTLTMVLLGMEIYGGYGNNPFNGVLIAWVVLQISF 136
WP_013258566  72 -------TKL-DDLHAVVMGLLLGLILPPvvagledACPWWIPVVGGALAVGLGKVLFGGIGAYPMNPVLIAWAALALSW 143
WP_014956533  72 -------LTI-GDLDAAVIGLLFGMMLPA-------TSPWWFVITGTFVAVVIGKTIFGGIGANPFNPTLVGMAFLMLSW 136
WP_081719448  90 ftiqlfiDEL-SNGSAVLAGLLLGLILPV-------TVSPFIPLIAGIFGMVVVKWSFGGLGANWLNPALAGTLFAGLSW 161
WP_128744153  69 -------ISV-TEISVLVTGLMIPMLLPL-------NAPLWLPCAASAFAVLVVREPFGGFGRNPFNPAAAGVAFAALCW 133
WP_072549637 160 PVQMTN------------WLPSVELqaspiNFVENLQVIFtgqtsenknshqlrQSFDGVSQATPLDT--LKT------E 219
WP_012176243 139 PAFVDF------------NYMLA-------------------------------DYETGFNMVYPMWS--AKYf-----G 168
WP_015905050 138 KGFFDF------------DAALL-------------------------------NYEFTFKALAPLGA--LKHq-----G 167
WP_012547868 140 PQIMTS------------WVKPINGl----------------------------GFMSNVSTATPLAI--EKL------K 171
WP_015949080 138 GGFMDV------------DASLAP------------------------------GYIFDFNMANPIVA--VKSaiwdgaG 173
WP_015750984 137 PAAMSS------------WAYPPG---------------------------------ELMTINTPLQV--LQEd-----G 164
WP_013258566 144 PEHTMA------------FLDPMPWg---------------------------tEDPEWVVSTAPLVE--FKN------D 176
WP_014956533 137 KTLFDF------------DAAYV-------------------------------DYEFGFTALAPLAA--LKFq-----G 166
WP_081719448 162 PGGMHArewgaalisglnWNPPSG------SLTDMARLKM-----------------SLIQDGSPRIFrpMEMi-----G 213
WP_128744153 134 PQTVFS------------YFDPSAPasf-----------------------ppfGAGSFGTALSPAAV--LKQ------G 170
WP_072549637 220 LR-N---QPLA----S-V-----------L-QHPLFGgILAGLGWQWVNLGFLVGGIFLLWRRIIYWHIPFSFLLALCLC 278
WP_012176243 169 SA-Svag--------------------ftP-MDLLMG-KQAGGIGATFGLGILIGGIYLMIRGYIRWEIAVSFLAGVFVT 225
WP_015905050 168 VA-Avgl--------------------fpL-KDLVMG-NQVGAIGTIFGIGIILGGVYLILRGYIRWEISLAYIAGIFLT 224
WP_012547868 172 LAgys---------------------lpsY-WELFIG-NRAGCIGETSVLLLLLGGLWLIYKNIIDWKIPVSFILTVFIV 228
WP_015949080 174 AD-Aasa--------------------fsT-KALLLG-QHCGTIGTMFGLGLIVGGLYLIIRGYLRWELCLSYLAGVIVT 230
WP_015750984 165 PF---------------Fvne-----ffsF-SDLLMG-RTVGFAGQTSALFLLLGGLFLLYRRVITWHIPVSFLAGVVAF 222
WP_013258566 177 IG-N-------------Mls-------yeM-ANLWSG-MYPSAVGAGGSWALLLGGVYLIIRRIVPWQIPLGVLAGLIGM 233
WP_014956533 167 AS-Avad-------------------lfpM-GDLIMG-KQVGAIGSTFGLGLIIGGIYLILKGYIRWEISISFIVGIIVS 224
WP_081719448 214 REfTnadSFISrflnEqIllsggtrlpggY-IDYILG-FKLEGIGQTSILLILLVSVFLFARGIISWQIPTGGVLALSVL 291
WP_128744153 171 FK-P-----------D-I-----------LpFNMLWG-NFPGPLGATGVLIIGACGILLFLTRAAKPEAAVCFLGAAALA 225
WP_072549637 279 ATYSHFIA---P-----------E-KFASATFHLFSGATMLGAFFIATDPVSAATTPRGRLIFGALTGVLVWLIRVFGGY 343
WP_012176243 226 ALVFSLAK---P-----------V-EYAGPVFHLLTGYTLIGAFFLATEDSSSPVNFVPMLIYGAAGGLLTVLIRNIGVH 290
WP_015905050 225 ALIFNLAN---S-----------D-LYAPPLFHLFTGYTLFAAFFLATENSSSPVNLIPMIIYGIMGGVMTILIRNIGSY 289
WP_012547868 229 SFLVG----------------------KDPIFHILSGGLFLGAFFMATDWVTTPLTSKGRLIFGIGAGLFTIVIRFWGAY 286
WP_015949080 231 ATLFSAFG---P-----------EgKYAGATFHVLAGFTLIAAFFFMAEDSSTPINLIPMVIYGVGAGVLTILIRNIGNY 296
WP_015750984 223 AGLFWAIN---A-----------E-AHASPLFHLVAGGTMISAFFLATDFPSSPVTKTGMLLYGFSAGVLTVVIRIWGQW 287
WP_013258566 234 ALLATYTD---SrivemeletfnD-HWNVALFHMATGGLMITAFFLAPEPVSSPMTPWGMLLFGVGIGVMTVLVRHWGAP 309
WP_014956533 225 AFFFNMAN---P-----------D-TYAGPMIHLFSGYTLLGAFFLATENSSSPANKIPMLLYGFFAAVMIILMRNIGVY 289
WP_081719448 292 TALFSGVNwggG-----------F-FSGDVLFALSSGGFLFILFFMATDPVTTPYTSGGKLIFGVGVGVLVFLFREFSLL 359
WP_128744153 226 AALFPRIL---C-----------S-PLTSVKYELLSGSLFFCSVFMVTDPVTSPRTFPGRCLYGAFAGAVTMAFRWFGVY 290
WP_072549637 344 PDGVAFAVLLANITVPLIDHYTQPRVYGHQ 373
WP_012176243 291 VDGVVFAILVINLINPLVDK-IRPKAMGKV 319
WP_015905050 290 PDGTVFAILLINLINPLIDR-IRPKALGKV 318
WP_012547868 287 PEGVSYGILVMNALTPLIDNLVKPRRFGEV 316
WP_015949080 297 ADGVIYAFLLMNVLNPLLDN-IRPKALGKV 325
WP_015750984 288 PDGAFFAVFLMSMLTPLLDK-IAPRVYGR- 315
WP_013258566 310 IDGAFYGVLIMNAATPLFDR-IRPRVLGKV 338
WP_014956533 290 EDGTVLAILLLNLVNPLIDT-IRPKVLGKG 318
WP_081719448 360 PDGSVLAVLIMNMLNPVIIILTRPKPFGFE 389
WP_128744153 291 EQGACFALLMADAVAPLMDS-AVFRLRGWE 319
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