5NV8,6J7L


Conserved Protein Domain Family
EarP

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COG4394: EarP 
Elongation factor P Arg32-rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 443520
Aligned: 76 rows
Threshold Bit Score: 395.777
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5NV8_A        15 KATWDIFCSVVDNYGDIGVTWRLARQLVAEHGLAVRLWVDDLNAFTPMCPGADATAAQQ----WQHGVDVRHWPAA---- 86 
WP_012823456   6 RIDWDIFCRVIDNYGDIAVSWRLARILTEDHRQVVRLWVDDLSALVHLIPEIDATEEQQ----SHHGITIIHWTDA---- 77 
WP_013835392   2 NKTWDLFCRVIDNYGDIGVSWRLAKLLHHDHQQTVRLWLDQPQALAAMEPDYDPGREQQ----VCHGITIRHWLDD---- 73 
WP_041193357   5 RQRWDVFCQVIDNWGDIGVSWRLATHLAQ-RGQRVRLWIDEPEALAWMAPQ------------GPDGVEVRRWTTPi--- 68 
WP_083526029   1 mRRWDLFCRVIDNHGDLGVCLRLGRDLAA-RGAQVRLWCDDLSALAWMQPT------------PVPGLQVLPWQEDagga 67 
WP_067270575  17 RRTWDIFCRVIDNYGDLGVCLRLARDLAQ-RGAQARLWSDDLSPLAWMQPE------------PVEGLACRPWDDSv--- 80 
WP_088886383   7 HLRWDIFCQVIDNFGDIGVSWRLAADLGS-RGHRVRLWVDDASALAWMAPQ------------GAPGVQVLPWPMQ---- 69 
WP_106685569  13 ALRWDVFCQVIDNYGDIGVCWRLSAELAA-RGHTVRLWTDDASALAWMAPG------------GASGVQVLPWPVQ---- 75 
WP_109035928   1 -mLWDVFCQVIDNFGDIGVCWRLTRDLAA-RGHTVRLWVDDAAALQWMAPDVQWTTRDAhrigSLGRITVHPWAAA---- 74 
WP_120177281  79 PRTAEIWCRVIDNFGDAGVTWRLARRL-RDLGLAVRLVVDRPDVLAKLVPELDPDQAES----VVRGIAVARWDDR---- 149
5NV8_A        87 -------------------------WL-----------------------------PV-APADVVIGAFACQLPAAYVEA 111
WP_012823456  78 -------------------------SA-----------------------------TP-RPARFVIEAFGCTLPEGYQQR 102
WP_013835392  74 -------------------------FS-----------------------------EI-QPATVVIETFGCELPTAYRQA 98 
WP_041193357  69 ------------------------dMT-----------------------------DL-TPGDVLVEAFGCEIPEEFITE 94 
WP_083526029  68 massaagapalaqssevthdtaslsLS-----------------------------EA-EPADVVLETFGCNLPQVYLAR 117
WP_067270575  81 --------------------------------------------------------GV-DPGDVVIETFGCELPQDFIAA 103
WP_088886383  70 -------------------------AP-----------------------------AD-GPGDVVVEAFGCEIAPQFIAA 94 
WP_106685569  76 -------------------------AP-----------------------------VD-GPGDVVVEAFGCEIPALFVAA 100
WP_109035928  75 -------------------------TVa---------------------------dDLpEPGDVAIEAFGCNPPDTFLAR 102
WP_120177281 150 -------------------------AAcaaevlaeleipagkaheeseehasegafAR-SASDLTIEAFGCRLPEAVEAL 203
5NV8_A       112 MRARP------------QPPLWLNLEYLSAEDWVEGCHGLPSPQPN----GLRKVFFFPGFTDKTGGLLREGSLLARRDG 175
WP_012823456 103 MHEQT--------------VAWFNLEYFSAESWISDYHGRFSPQPN----GLQKQFVFPSTRPDSGGLLREAHLFLARDR 164
WP_013835392  99 MRNQS------------AQPIWLNLEYLSAESWVSDFHLRPSKQPC----GLDKTFFFPGLRPSTGGLMREGDYAQRQQA 162
WP_041193357  95 YVRHLg----------aSPARWFNLEYLSAQNYAARCHGLPSPVSVgagkGLVKRFCYPGFTAQTGGLLHEDDLLPKLER 164
WP_083526029 118 MAARE------------VPPVWINLEYLSAEAYVERSHGLQSPQFSgpgaGLSKWFFYPGFTSRTGGLLREPALIDAVQR 185
WP_067270575 104 MAARP------------VKPAWINLEYLSAESYVERSHGLRSPQFSgpgaGLEKRFFYPGFSGRTGGLLREPGLIEAVDA 171
WP_088886383  95 IAHHTna--------tgPKPLWINLEYLSAEAYVERCHRLPSPLMSgpgaGLTRWFYYPGFTERTGGLLREPDLLARQAA 166
WP_106685569 101 IAGAArt--------rgRPPVWINLEYLSAESYVERCHTLPSPLASgpgaGLTRWFFYPGFTSATGGLLREQDLPARQAA 172
WP_109035928 103 MVRPA-------------PPQWINLEYLSAEDYVERSHGLQSPVWSgpaaGLVKHFFYPGFTARTGGLLREPGLIEAQDA 169
WP_120177281 204 LARSReervarglpaegSGFLYMNLDYLSAEDWVEACHDVWGLHPNl---PLRKLWYFPGFTARTGGLLIEDNLREDTED 280
5NV8_A       176 FQQSAEARRAFLQGLGVDLVPGALLISLFAYENPQLGNWLDALATAD-------QPCHLLVPQGRVVAGLSQWLGEGPL- 247
WP_012823456 165 FLHLE--QTKWAHDWQIPl-PNGLSLLLFGYENRAIGELIDDLAQTTt------EAVTIYLPEGRLLSSAREHLRYPEL- 234
WP_013835392 163 ITKSTTQNTTLPNGLTLA--KNTFKISVFCYENNALQELINILSEPHiplpkgyDSVTLLIPAGRAHGGLARAIQ-TRL- 238
WP_041193357 165 FDR-----AAWFDQQGIAWHPSQTVWSLFCYATAPVRSWLDALSQSG-------QRTLVLVTDGIAARLVREALA----- 227
WP_083526029 186 HDG-----RAWLAERGWAPGAGERVLSAFAYPHAPWDALLEHLT----------GPWLLLLCPGSAQQTVPPRL------ 244
WP_067270575 172 HDG-----TAWLDGRGWAPAPGERVLSLFAYPHAPLAAFLEALG----------PGWLLLLCPGAPQAELPPLL------ 230
WP_088886383 167 FDR-----TAWRAGHGIG--ADEVAISLFCYEPPALPQLLAQWQPRS--------DVRLLVTPGRATAAVRQWQQQFESq 231
WP_106685569 173 FDR-----EAWRARRGIA--PDALALSLFCYEPPALPELLAHLHQRQd------APAHLLATPGRAAAALRAALTTISSq 239
WP_109035928 170 IRQDATARAATLANLQVPHQPEERLASVFCYAHAPLARWLDALAAEP-------VPTRVLLTPGHATRLGEAWA--HAR- 239
WP_120177281 281 FAHR---RDDILRALGAK--PERPALFLFAYPVNALARLADGIAASAa-----vEPLTVLAAPGAAGDEIERLL------ 344
5NV8_A       248 --HVGDVRTRGALTVQVLPFVSQDDFDRLLWSCDFNAVRGEDSFVRAQWAGQPMLWHIYVQDENAHWEKLEAFLAHYRCG 325
WP_012823456 235 --MAGDQFQRGAVTLHVLPFLPQAQFDRLLWMCDILFVRGEDSLVRALWAGKPFIWQIYPTDDQAHWEKLDALLDTCRGD 312
WP_013835392 239 --ATDGYWQQGRIHLYSLPFMSQTDYDQLLLKADLNFVRGEESFVRAQWAAKPFVWHIYPTDDDAHWNKLHAFNDAYTGG 316
WP_041193357 228 ----HGHGASDSLHVYYLQRLSQQEFDHLLWSSDGNVVRGEDSLVRAIWAGKPMLWQAYPQEDGAHHAKLHAVLDAI--- 300
WP_083526029 245 ---------RPGQRSIALPYLSQADYDRLLWSCDLNLVRGEDSFVRAQWAGRPMLWQIYFQDDGAHGPKLQAFLDLAWDG 315
WP_067270575 231 ---------RPGQRAIALPALSQADYDRLLWSCDLNLVRGEDSFVRAQWAGRPMLWQIYFQDDGAHGPKLEAFLGRSMAG 301
WP_088886383 232 nsLQGSYSKREQLSISYLPPCPQPAFDEMLWACDLNFVRGEDSLVRALWAGQPFVWQIYPQHDDAHHAKLLAFLDWL--- 308
WP_106685569 240 nrPEPASIKRSALSISYLPRCTQQAFDELLWACDLNFVRGEDSLVRALWAGQPFVWQIYPQHDDAHHAKLLALLDWL--- 316
WP_109035928 240 --TAAGTPPASHLHLTPLAALSQPDFDRLLACCDLNLVRGEDSAVRALWAGRPHVWHIYEQDDGVHADKLDAFMARWMAG 317
WP_120177281 345 -------QGRAGVDVCRTPFVPQEAFDDLLRASDAVVIRGEDSFVRAQLAGKSLLWATYPTEDNAHLIKMDAWLARVVPA 417
5NV8_A       326 LS---DDADAALLGLWRAWNMDFDMGQAWRA---ARQHWPEL---QQHARLWGARQAAQPDLATALVHFYR 387
WP_012823456 313 LP---APAFDAWRTLTHDWNRQQLAPESWQN---FIEHHALL---ASAAEKNRLTLASQTELSNWLVKTAY 374
WP_013835392 317 ME---SQLEQTIRDWQIAWNQQQLNKQVWLD---LVNHWPAW---QQHAIHWAQQLEKIGELSTNLVKFVQ 378
WP_041193357 301 ------GAPPLMRAVHAWWNGSTPA---LPGi--AWNDWPAW---LPTMRRARSTLLALDDLTDTLLRWAA 357
WP_083526029 316 ED---AAVRSSWTRLAQAWNGLTSW-EGVPEv--TAANLDAI---GPQSLAWRAKLMRQPDLVTQLMGFAL 377
WP_067270575 302 AP---ASLQARWLAVSRAWNGLAPW---TPE---AAQALRDWdgaSAHARAWRAELAAPPDLTTRLQAFTG 363
WP_088886383 309 ------HAPASLRRWSALWNGLETR-SELPPl--DAATLGEW---RACIQSARARLLAQQDLLTLLLGFVV 367
WP_106685569 317 ------DAPPSLRRAHLAWNGLPGA-PALPPl--TPRTLAEW---RACAQSARDRLAQGADLVTQLLGFVR 375
WP_109035928 318 WP---ASLARDVSAWWRAWNGLAP----WPAtlpAWPDPAGW---GHATLRAREALRAEQDLVTQLIAFVT 378
WP_120177281 418 LAetdPESARILETANREWLSGELePETFAA---WWRSRGAI---ERGMARWRDRLFAHGDLARRIVERAE 482
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