Conserved Protein Domain Family
Cas4

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COG4343: Cas4 
CRISPR/Cas system-associated exonuclease Cas4, RecB family [Defense mechanisms]
CRISPR/Cas system-associated exonuclease Cas4, RecB family is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 443484
Aligned: 32 rows
Threshold Bit Score: 270.312
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AFU57325       8 DRRRLFKGIVS-RGRTMTVDESLRGWNWDKppIEPPYDtIKLGVYEVAsQYCQSGRDVFVRRIDGIKGvPSKDMVRGLVY 86 
BAA80230       1 MFPRGLWDLVR-SSAGDGVYAELRGWKWNV--VGPRYA-ARPTLSDVT-GVCPVGRDTYLRRVLNTRV-NGGLLRLGALV 74 
ADM27739      37 MLPRWVWDYVR-ATAGDGMYAEVRGWRFDV--VGSRFR-ARPSISEVA-SPCPTKRDVYLRRVLHTYV-DSQVLRLGRAV 110
WP_010923372   7 DMLLLSKRIKK-LPKN--VDEELRGWNWSEppVYTRSL-SQVSISEMV--YCSTLRNVYLKVK-GFRGeIGRQILQGSLI 79 
WP_011007094   6 EIARLLRRAKI-TWGPVEISPEYRGWNYDKppVKPPAY-LGLALSDFAyGYCPTGRNIYLKYVLGERGaAVKALVEGQAL 83 
WP_011821826   2 VLPRRVWDYIRsLGSEGPVYAEIRGWRFDY--VAPRYR-YRPSVSEVA-SYCPSHRDAYLQHVRGLQPpRSLRAQYGVLV 77 
WP_013336799   2 VLPRWVWDYIK-VTMEGGSYAEIRGWFRDA--VAPRHV-VRPTVSEVS-SPCPTKRDAYLRRVAGVTMeDSESLRLGRMV 76 
WP_013775179   7 DILLLSRRIKK-SPRA--IDEELRGWNWNEppIYSQHF-SQTSVSELI--YCSTLRNLYLRQKGYKVGeESSLIKKGRAI 80 
WP_014127138   6 EIARLLRRAKV-TQGPAEVSPELRGWAYDRqpVKPPAY-LGLALSDFAyGYCPTGRSLYLKYVLGERPqPTKPLAEGQAL 83 
WP_055407625   2 VLPRRVWDYIRsLGSEGAAYAEIRGWRFDY--VAPRYR-YRPSVSEVA-SYCPSRRDIYLRRVVGVKPpRSQQAVYGMLV 77 
AFU57325      87 HYAVADEISvaKAYMYkqgvlgaaglyehlkakseerfasymlthgeyfreaafteaDIEEVKMNLDKLWGYEASQMAAs 166
BAA80230      75 HEAFLLPFK--AHRVG-----------------------------------------DAYRMFNYLLRRVRARGNEIRV- 110
ADM27739     111 HEVFLLPFRyrGRDIE-----------------------------------------WLYGMFRRSLKDYADLRGYWKA- 148
WP_010923372  80 HTIYAIGIEaiKRFIYsresidgstlrtlm-----------------gdefysllkdlreeEGIYAKVLWDHITNIYSAe 142
WP_011007094  84 HQALFKALEdyKKYAYsghpms------------------------------psfegVPEDVRPKAEALYKYVATRLLGe 133
WP_011821826  78 HEFFLEPFRlvDRGAD-----------------------------------------SLEALTAGKYRLARRLGVRADRf 116
WP_013336799  77 HEVFLTPFKe-SIPFS-----------------------------------------QLDNRFESIINEYGDLGNKYRAq 114
WP_013775179  81 HDTYSTAIStiKRLLYsspqidgnklktlm------------------tdefysflkkyedQADYVKTLWDYITNIYSAe 142
WP_014127138  84 HAVLFKALEdfRRYVYsgapms------------------------------ppgegMPEDLRAKAEALYRYIAVRLTGe 133
WP_055407625  78 HEFFLEPFRlvDRGVT-----------------------------------------DVEELAAARRQLARRLGVRPDRf 116
AFU57325     167 IKAILSKQPrIGIDALVHTAIPVIVEQKIDGSALGLSTHLSVDAFSFd-SIILDLKTGEEK-----EFHKLSTTGYALVY 240
BAA80230     111 MNAVFEKAV-EFSAAARVDGIPVAVEPNVPGGPVGLSDYVRPDLLVG--IMPVDLVLAGHGdr-wvARKELAIAGYALAV 186
ADM27739     149 FESVFRKSL-ALSMIAEEEQMPISVEPYIPGGAIGLSDFVRPDLMVG--FMPIDITLSLGGns--lERKELALAGYALAI 223
WP_010923372 143 LDRVRSKFTnLTRDSLVSQVVPFYVEFPVDGSLLGLT-NLRVDAFIPhlPLIAEMKTGKYR-----YTHELSLAGYALAI 216
WP_011007094 134 HSYVSAARLaRSRDSAVFYTAPIATQVAVDGSPLGMS-YVVADGVAL--GAVIEFKFGPAQ------NVDAALAGYAMAI 204
WP_011821826 117 LERVYELGAiLALQSRVDGDIPLRVEPPIPGAPVGLSDTVRPDLLVG--FIPVEVTAAGPWgt-ygSKKELQLAGYALAI 193
WP_013336799 115 LYEVYTKAV-ATSLNAREEGIPISVEPAIPGAPIGLSDIVKPDILVG--FIPVELVTSSQPteeltSRKDIAVTAYALAI 191
WP_013775179 143 LDRVRSKFFnLTEDSLVSSVVPFYVEYPVDGSLVGLSSSLRIDAFVPfiPLIAEMKTGKYK-----YSHELQLAGYALAF 217
WP_014127138 134 YQYVLASRLaRSRDAAAFYAAPIAAQIAVDGAPLGLS-YVVADGVAL--GAVVEFKFGPSQ------NVDVALAGYAMAI 204
WP_055407625 117 LLRVYSLGAaLALQSLVEGGVPVRVEPQLPGAPVGLSDMVKPDLLVG--FIPVEVTTADPYst-ygGRKELQLAGYALAL 193
AFU57325     241 ESIFEYPINVGCVVYVNFs-NNSpvPIIKRVPHLIDETLRREFLEARDLRMKMIYDRRDPGLP-RKCYAKCQYLRH---C 315
BAA80230     187 EAWTGNPVDYGVVVGLRV--NDG--LKIVWRLVRVDDHLRTRFLERRDAVARIIEYRSDPGLP-EACPPGCVFREV---C 258
ADM27739     224 EAWSGNPVDIGITIGISI--NSD--VRFQWRVVRIDDSLRRRFIEARDDVARIIEYGEDPGKP-SQCLKMCPFREV---C 295
WP_010923372 217 ESQYEIPIDFGYLCYVTVt-EKE--VKNNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIA-KDCESDCMFYKV---C 289
WP_011007094 205 EADWGVPIDYGIHVQITV--NST--VEYKATAYPLGDSARTKFLELRDEAIDIVIAGRDPGVA-PDCPKTCPFYHI---C 276
WP_011821826 194 EAWTGIPVDYGVVVYVTRr-SDE--PRPEWRVVVIDDALRRSFLRERDEVAMIVENRVDPGPAgEGCPSWCPFRGVe-gC 269
WP_013336799 192 EAWIGHPVDIGVVLHISI--NGK--PRLTWRVVKIDDTLRRAFLDMRDNVARIIEHGDDPGPA-SSCPRTCPFYGV---C 263
WP_013775179 218 ESQYEIPIDFGYLCYVNVd-EKE--VKSNCKLIQISNSLRSEFLDKRDKALEIMDNVIDPGIA-NDCEKECPYYKV---C 290
WP_014127138 205 EAEYGVPIDYGIHVQIAV--DGQ--VEYRASAYVLGDAPRAKFLEARDEAIDVVASARDPGPA-PQCPKTCPYYSV---C 276
WP_055407625 194 EAWTGFPVDYGVAVYIRRreSGD--PFPEWRVVPIDDGLRRSFLRARDEAAMIVENGVDPGPAgDGCPAWCPFRGTvqgC 271
AFU57325     316 GV 317
BAA80230     259 GV 260
ADM27739     296 GV 297
WP_010923372 290 HP 291
WP_011007094 277 HA 278
WP_011821826 270 PG 271
WP_013336799 264 HG 265
WP_013775179 291 HP 292
WP_014127138 277 RS 278
WP_055407625 272 S- 272
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