Conserved Protein Domain Family
COG4342

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COG4342: COG4342 
Phage integrase/recombinase [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 443483
Aligned: 23 rows
Threshold Bit Score: 214.959
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_055410299   1 Mknggd---------------------------rvagpG-GFEPPTTGlgvpsqdrnrneifsregsepsaqaWKILLPD 52 
WP_070105199   1 M------------------------------------------------------------------------------- 1  
WP_083756350   1 Msr----------------------------------------------------------------------------- 3  
WP_012608797  83 lteaefkeivqgvdrlralgivrsdgsvdyslilqaialahrdeylkhallkfvvenfredlkkmlgvsyahvKFTWEKG 162
WP_048086629   1 MwrklkqiaeslnanisdlletkiieliavyesflgtgreGFEPPTAGlrvrqsf-------------vsfdlreFYSKH 67 
WP_015053359 102 Fr------------------------------------------------------------------------------ 103
WP_048091889   1 Mka----------------------------------pGpGFEPEARArq----------------------gIINYSEV 24 
WP_084063640   1 Mrssaar-------------------------qftssiS-EIESNNGLirypeeakgsk---lhqkyngynerIKFEDID 51 
WP_084063770   1 Mtrrmrsvsvsnvyf-----------tpsllqnkglmlrpGFEPGSPArkawi---------------sddfiVIDYQRH 54 
WP_055407281   1 M----------------------------------------VEPGSSGlp----------------------vISLHSGL 18 
WP_055410299  53 ANRF-RDWLSGK--VE-ARTLEDYMRYYSKLPq---vLTPDSITE----LAKRSKWYANLIRKIASFLWET--GSITL-- 117
WP_070105199   2 ---------------------KDYISALERFFgrhtiRDIKGLKVsl-qQENYNEKIVKGLRNFVNFLLDE--GLINE-- 55 
WP_083756350   4 -----------------------------------------------rcQSQATNGCGSCSRHYANYLYTR--GEISH-- 32 
WP_012608797 163 FEEF-LSERKKRrkVRdPETISYYRNLFKKYLegr--elSEELVDy--vINHENKWLRNVFRHYVQYLYYK--RAVSP-- 233
WP_048086629  68 ESEF-REWLYGR--MS-KKSADQYLSAIKRYLph-gvSEPKDLDRlv----tKTKYLPLGIRNFLNFLEDQ--YYMDNlg 136
WP_015053359 104 -------------------------------------------------KLKFKDKESRGLWNLFNYCEDEeiDILAG-- 132
WP_048091889  25 REEF-VEYITQR--VT-PDTARRYLHYLDTYVgekkiNTPEDITAifkgVEKGRNWLAKSIRNLLNFYVEA--KSMDE-- 96 
WP_084063640  52 YEDFeLFWTAERkmKTsKGRVKRLYNVLRKVLsgk-viNEESLREgf-hKTTNKKDYVNAVRVLLEYLKVR--KLMPR-- 125
WP_084063770  55 RNEF-IEWLQKK--SK-KTTWQNYVTLLDRKLsgvkiFDKDQLAEiydeLERNKANFAKGVRNFLNFLVEK--KGFPI-- 126
WP_055407281  19 LQSF-RRWLIEKerIE-ERTANDYVSALEK-------LDYLDEEKa--lEALGNDKAYKAARKLVQFLFET--GRLSK-- 83 
WP_055410299 118 -EERERIYA--LVRGQRSLRKAkaPAVEAEKIRFTIDYLEaa-gQHGY-ALLYKIMYYSGARAEEAEYLVRAAASLKPVS 192
WP_070105199  56 -GTAALFKK--PLTFKRGTPRQ--VFISNEELREAYIELTkh-yGKEA-EVLFKLLAFTGLRLKHIVKMLNTYDPQKLVI 128
WP_083756350  33 -QTLHWIQA--RVPGRRTPKTPrnPAVDLEELRSTLAYLAg--nHERY-YLLYRLMLESGLRFEHALRLLASPILEGSVV 106
WP_012608797 234 -EVYGWLME--VVPSRSYKIDVrpYPINAEDLAKTMGFLRt--nHEKY-YLVYKLMLEGGLRLSHALTLIETFNPGEVIE 307
WP_048086629 137 gFSFAIWRK--HLPTKTGNKKGekIFLTDKDVVKCFKLIKek-wNDEVtINLYKLLVFSGIRLEHAYRLLESFDKRKLII 213
WP_015053359 133 -HALEKWRR--FVKIPKSGVTE--VYITDEEVHEAYVSC-----PSEL-KILFKLLICSGNLLAHLYLMLQRFDEKKVVI 201
WP_048091889  97 -SVANKFKK--ACKIERSGVRA--IFISDDEVREAYTHTVas-rRKEV-QIFFELLVYSGIRASHAAEMLKNYDENQLIK 169
WP_084063640 126 -EVVQEILEqpFLTPIRSKRRG--IYLKDEEIRQAYEWLKekwkDKDT-ELLFKLLVFSGIRLDHALDLLYNFDPRKLEF 201
WP_084063770 127 -AVAEEFKS--VLKIPRSGTDK--QIPSDTDIIEAHEYFRsk-lTPEL-LNVFYLLIFSGLRLEHILQMLRNFNPARLEI 199
WP_055407281  84 -DAKERYLS--LLKRKTESKVSerVEIDWAELVSALRDVAeh-vRPEW-RLSLYILYYSGARIDEVLRMIAEYDPSRLEI 158
WP_055410299 193 HqRsle---------qtGyvelgdAVRVAL-HFNRGKKRCEFLWLPREVFEEARAWHGeppSARRLSYYVRNirrr---- 258
WP_070105199 129 V-N--------------Ek-----VARYPMaEHGKGTKRAFWAYMPADFARSLERMSI---TYFQAQPRTTY-------- 177
WP_083756350 107 VyDrvyprl--ycdegrG------FCRLYL-GFNQGVKRAEFAYFSTKTRRLVEDLTPwsvHRRSVERYVSRh------- 170
WP_012608797 308 VpGvgletkrlvclhdkG------FCRYYL-GVKDIAKPCEWVYFSLNTLRLLEKYRGsriSRRVVEKFVRGh------- 373
WP_048086629 214 E----------------Gk-----VAMYPIeEITKGHKKGYFAFLPAEFARKLEKYDMm--KLAAYKSRLTPkqwk---p 267
WP_015053359 202 D----------------Gd-----IAHYPSsEFSSGNKRTFQIFFPTAYILDIKSFQSp-dKYKTVSKKLQV-------- 251
WP_048091889 170 IpEk-------------G------IARYPIvEFSRGNKRGFFAYLPLAFAEELERIKKl--DYKYLVEAIRY-------- 220
WP_084063640 202 K----------------Gr-----VARYPLtNISNEIKSGEYAFMPAEFARKLKKIKKk-lNYQTWENRINVkrwrgdek 259
WP_084063770 200 L-D--------------S------FARYDMsGIGSENKDAYECYMPVWLAKRLSQVDL---DYRFAKDSINYkak----- 250
WP_055407281 159 LpD--------------G------VARYGL-FWKRGKKRCDYIYFPARLLEAIEEHAGtviGYKTFTRRLTRd------- 210
WP_055410299 259 sglDLAPPKMLRKHHYQLMEDLEIDLELRELIQNRYakiENVVGLTNYSKI-VLRADQAYVEKIlPELRRRLQVYL 333
WP_070105199 178 ---KRVSASTVRKWFSTFLAQRKVSMEVIDFIQGRA---PRSVLERHYLNL-TVLADEAYAKVV-DDLRKVLEGQT 245
WP_083756350 171 ---GLMRPGLLRKASWQLLIASGVPREVARFIHSRFg--ELRVSESYYEGL-VREADQWYPRYL-KHLKSLNLT-- 237
WP_012608797 374 ---GLLAPKYMRKASWRLMIQ-VMPREVARFIQSRFg--ELKVSEARYEDL-LGEADKYYPAYL-GLLSKAFTTLK 441
WP_048086629 268 pvdSPVSPIRIRAWFQNFAIEHGVKTEALRFIVGHS---PATVGEAHYYNL-KKIAKEEYKKIV-DKFPIPP---- 334
WP_015053359 252 ---RRVSAKTIRKWHLNVMIKEGVTESLADFIQGRA---PATVGSAHYLNK-VQQAKEEYRRIL-ANFSFDL---- 315
WP_048091889 221 ---NRVSANSIRKWHYNKLIESGIDTSIADFIQGRA---PQSVGAMHYLAS-ARQADQAYSKAV-EAIKRVIE--- 285
WP_084063640 260 ykkSRVDANAIRKWFGNFCLSHDVSESATEYFMGHA---IKGMGGKAYFDLrDKLSWREYEKIV-DKFPIpp---- 327
WP_084063770 251 -sgKTISAKYIRKWTNNFLKKQGVPKDERNFILGRHseiSKSVENFNYLDL-RDDADMWYARVV-DKFPIKEVeha 323
WP_055407281 211 ---FGFEASKLRKLHRQ-VCRRVLGRDVCEFYHSRLg--SLKVGDLAYENL-RQLADASYPELL-KMLEEGLERPE 278
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