Conserved Protein Domain Family
COG4328

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COG4328: COG4328 
Predicted nuclease (RNAse H fold) [General function prediction only]
Statistics
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PSSM-Id: 443469
Aligned: 45 rows
Threshold Bit Score: 195.55
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_096421930   1 M--------ALFLGIDLAWGlggrrPPNETGLCAL---DETGCILDAGWTRGPGAVDEWVGTMLAqhraaGETVVIAIDA 69 
NP_387202      1 Mslh--tgfTSIVGFDSAWTd---nPKAPGAICVIrldGDGAHLYLAPRLASFAEALDVIERERKe----AQKCLVALDQ 71 
WP_011650834   1 MgdpgsattISVVGFDSAWTd---nPKAPGAICVIridSQRAWLHVAPRLASFSEAEAIIRAETLe----GGKCLVALDQ 73 
WP_015496001   1 Mt------iETLIGFDSAWT-----DKNPGAISMIthnQGKLVDFMPPRLVRFEEATEMVQRAASa----SDFTLIALDQ 65 
WP_082003600   1 MgrvsaseqQLFVGIDLAWV------NGRTGLAAV---DRAGALVDSTTVSSDDEIAAWVEGLP------GTVVVAAVDA 65 
WP_014148609   1 Mvp-----kIGIYGFDSAWTn---nPKQPGSICALi-gDDQNWVFHEPRLARFVEALAFIHAHP------AHKQIIALDQ 65 
WP_062164587   1 M--------DTYIGFDSAWTd---kQKSSGAICAVtmdGSKLHAFIPPRLATFSEALEFIRSART-----EGVTQLALDQ 64 
WP_066636413   1 ----------MFVGIDLAWN-----DRARTGLAAV---DDEGRLLGSATCRSDEEIDEWLRAYP-------SPDVVAIDA 55 
WP_018067802   1 Mat-----aISVIGFDSAWTd---hPKKPGAISVIritDNVCSLARQPELCSFAEAEAIIRIEQEv----SAKCIVALDQ 68 
WP_122824294   1 ----------MYVGVDLAWS-----NRARTGLAAV---DRAGRLVDSASVTTDDEIVAWVGAHA-------PVRAAAMDA 55 
WP_096421930  70 PLIVPNETGMRACERDVGRCYGRWKVGANASNRALAS---RAGEVLLELLEQRGVAYTDGttPA-APGAAVAFECYPYTT 145
NP_387202     72 PTIVPNLTGSRPVDRVAGSLISWIGGGVQPASRSKKGm-fDDGAPIWRFKQTLAATEEPEl-ARaASSGLFLIEVFPALA 149
WP_011650834  74 PTIVPNLSGSRPVDKVAGALISWVGGGVQPANRSKLGm-fDDAAPIWRFKQAIGAIEDPEa-ARaASSGLFLIEVFPALA 151
WP_015496001  66 PTLVPSFEGMRPVERVVGSVVNAIGGGVQPANRSRESm-fGQGAPVWQFLDRVGARENPTa-AReASHGLFLIEVFPALA 143
WP_082003600  66 PLLVPNETGQRPAETAISRAYGTFKIGAHTANRGRPGmaePRAKVLAE---RFGWSVAPT--HRgSVGWPVCIEVYPHPA 140
WP_014148609  66 PTIVNNATGIRPVERVAGSIVNRLGGGVQPANQGRANm-fDAAAPVWRFIQSLQAIQNPFa-ARaEVHGRFLIEVFPALA 143
WP_062164587  65 PTIVPNLSGSRPVEKVAGSVIGWMGGGVQPSNRGRTGm-fCDASPIWKFLQTLNSVEDPEe-ARvARHGLYRMEVFPALA 142
WP_066636413  56 PLIVHNPTGQRPCERMVTSAFGRFDAGCHASNTSKAYmnpPRAARLAQ---RQGWAPNPS-----ATGPGVCLEVYPHPA 127
WP_018067802  69 PTIVPNLTGSRPVDKVSGSLISWAGGGVQPASRAKRGt-fDDAAPIWRFKTALGASDDPEg-ARlAARGLFLVEVFPALA 146
WP_122824294  56 PLIVTNASGQRDCEREVSRVFGRYGASCHASNLTRPYfnpPRGATIAR---RLGWTLDPD--PTyAAGVPPCIEVYPHPA 130
WP_096421930 146 LVGVDAFgy-dDERPRYKRLDRsiasseaKLRRAAATDELILRLDRLAEadadprldvrshaVTAEIAATLTP-PSGEKT 223
NP_387202    150 LAAIEGTfcsrLAAPKYNPANR-------KRFKISDWQAVAEAVRRFGMl-----------nSLRHLDEWCLIaASSEAP 211
WP_011650834 152 LVVMESAyckrYGAPKYNPANR-------KMFKLEHLHSVAETIRTFGSl-----------rALEQLELWCSDvSTNLMP 213
WP_015496001 144 LASIIPTiwhrRRAAKYNPGQR-------KTFVHADWGLVTDGIASLAQq-----------wGVQPIMTAANElGKLQSP 205
WP_082003600 141 MVALFAL----PERLTYKSKf-------pFDVRRAAFAELVGHLETITElglg------ghaRWAALAAAVRD-AGTQGD 202
WP_014148609 144 IPSLVPNiwqrERAAKYNPGQA-------AKFQLADWQLVCAGLIDRALd-----------cGLHMVIDYLRKeQIKPNP 205
WP_062164587 143 LASFDPGyfgrLAAPKYNPVIR-------KKFRLTDWKRVARAAAREAEi-----------yQCAAVAEWCREaEAFGTP 204
WP_066636413 128 MVGLFGL----GRILPYKGKRGr-----sLDVRRAAMVELLDRIEGLGDldls------gsvRWREIRYAVEH-ATRPMH 191
WP_018067802 147 LVLLEPSfhqrLAAPKYNPSYR-------SKFRPEDWRKVAHCAAAMAEr-----------yGIAEAAEWSHRsAAMALP 208
WP_122824294 131 MVGLFEL----GSVLPYKAKGGr-----sFERRRAAFLELLAHLESVDVlglp------aneRWRSIRAAVED-ARRPMH 194
WP_096421930 224 RKHREDLIDAALCAYTAAFWHRHGSARTQALGTL---DpatvdrdargrVASIVAPARRTARasqwrahwgaarpvdsSS 300
NP_387202    212 RKADQDKVDALICGLIGLHWLAAPRDQSVMIGDL---E-----------SGYMIAPATRGVHerl-----------raAA 266
WP_011650834 214 RKADQDKVDAMICGLIGLHWLVAPRDQSVMIGDL---D-----------NGYMIAPAVNGIHerl-----------vtAA 268
WP_015496001 206 TKSDQDKLDALICLMIAWTWRFRPREDSMLIGDS---I-----------SGYIVTPVSGDTRpil-----------vkSA 260
WP_082003600 203 LNAVEDELDGILCAHLAWRWHE-RPESLQVYPSLqewE-----------DGYIVAPAPPVRPl--------------pAP 256
WP_014148609 206 TKSDQDRLDSVICSLIGFYWLKSGLVENCVIGDE---H-----------HGFMVTPAQPTIQsil-----------qrAA 260
WP_062164587 205 RKADQDRLDAILCLLIALRWRLMPREASIMLGDL---A-----------NGYIVAPCSPQVRerl-----------qrAA 259
WP_066636413 192 LEHVEDEIDAIFCAHLARVWRH-SPGALQVYGDV---E-----------SGYIVAPPAPSHAa---------------tP 241
WP_018067802 209 RKADQDRLDAMLCALVGLHWLLEPRERSLMIGDL---Q-----------TGYMIAPALDGLPerl-----------vhAA 263
WP_122824294 195 LERLEDEVDAVFCAHLAWRWRE-APESLHLYGTP---A-----------DGYIVATPPPTHPv---------------sA 244
WP_096421930 301 RHEHP 305
NP_387202    267 RQRDV 271
WP_011650834 269 RKRNV 273
WP_015496001 261 LRRSV 265
WP_082003600 257 PTDEL 261
WP_014148609 261 AEKWV 265
WP_062164587 260 QQRSV 264
WP_066636413 242 RPGRV 246
WP_018067802 264 RIRDV 268
WP_122824294 245 RVATV 249
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