Conserved Protein Domain Family
RecJ

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COG4199: RecJ 
ssDNA-specific exonuclease RecJ [Replication, recombination and repair]
Statistics
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PSSM-Id: 443353
Aligned: 44 rows
Threshold Bit Score: 456.466
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013372638  11 PEVNLEAAQPLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDVHDPFLLLGMKEAVPRIRQALERGEHILIYGDYD 90 
NP_764873      1 MIKSKYNWDITQPNTFISESSSDQFKLSPIVKKVLESKNIVDNQEIQNLFEGTNISHDYMLLSDMQKAIDRIKLAIDQNE 80 
NP_815396      3 KSNYQWQLQTKTELPVEFIEQLKKEEINPLIGQLLWHRNIRTEEALRKFLHPTIEDIYDPFLMHDMEKAVARIQQAVEAG 82 
NP_390640      3 ASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFLHTKDADFYDPFEMKGMKEAADRIKQAISQQEK 82 
WP_000595011   1 MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQAIESIISDTDVNHDALQLSDMTKAIERIKRAIANDE 80 
WP_011275583   1 -MIKSKYNWLYEPPTEYINETLIKKYQLTPIIKKLLESKSITDDESIKALLDETIINHDPWLLSDMEKAVTRINEAIDKN 79 
WP_041636043   1 -MVVDKTVWTVKKPVDTIPAALIKKYDITEINRKILESRHIVTEAALHDIFVADDIHDPFAMHDMSKAVKRIQTAIDNNE 79 
WP_014643867   1 --MIQSKMKWQFTYNENVEGFEVQQGLTSLTQQMLEKRGIVEPDAVEQFLNPSIDYLHDPFLMEGMEKAVERVKTAIHRE 78 
WP_096551333   1 -MIQSSKKWKIQIPDEMFVQQLQNNLHISSLTAKILASRVKTLDEARNIIHMKDDQLHNPYLLTGMKEAVERIELALHRG 79 
WP_112181451   2 LQSQTKWNFTYKQHAAISEELASLNVSPMIKGMLAKREISTIEEAETFLNPNLKDLHDPSLLNDMEKTKQRIDQAIEQGE 81 
WP_013372638  91 ADGVSSTSLMIQLMRFLKASYDIYIPHRSNEGYGLHNHALDWAHQQGVTLVITVDTGISAVEQIAYATSLGIDVIVTDHH 170
NP_764873     81 RILVYGDYDADGVTSTTILVSTLRLLGAQVGWYIPNRFTEGYGPNELAFKNAYDEGISLIITVDNGIQGHHEISTIQELG 160
NP_815396     83 EQILVYGDYDADGITSTTVMKEAIELVGGMVQYFLPNRFVHGYGPNKDVFAEQIEQGVQLIVTVDNGVAGHEAINYAMAQ 162
NP_390640     83 IMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFKEGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAKVAKELGL 162
WP_000595011  81 KILVYGDYDADGVTSTTILVTTLQLLGAQVGWHIPNRFTEGYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLG 160
WP_011275583  80 ERILVYGDYDADGVTSTTILVKTLQTLGAEVGWYIPNRFSEGYGPNELAFRNAYDEGVSLIITVDNGIQGHKEIEMVQKL 159
WP_041636043  80 MILVYGDYDADGVTSVTVLVNSLKSIGAKVGWYIPNRFTEGYGPNEQAFREAHDAGISLIITVDNGIQGHHEVNVANELG 159
WP_014643867  79 ESILVFGDYDADGVSSTTLMMEALREAGAYCDFYIPNRFTEGYGPNEEAFLFAKDSGYSVIITVDTGIAAIHEAEVAKQL 158
WP_096551333  80 EKILIYGDYDADGITSTSVILHTLLDLGADVDFEIPNRFTHGYGPNEELFRLAHEKGIQLIITVDNGISGIEPIRIAKEL 159
WP_112181451  82 SILVFGDYDADGVSATAVLIEALREAGAMCDYYIPNRFTEGYGPNEQAFRDAKKQGFQLIITVDTGIAAIEPAFVAKEIG 161
WP_013372638 171 EPPAVLPEAYTLINPKLPDCPYPFKGLAGVGVALKLAQALLSEVPEEWFEIAAIGTVADLMPLHGENRTIVRRGIQSMRN 250
NP_764873    161 VDVIVTDHHEIGETLPDAFAIVHPMHPNFEYPFKYLCGAGVAYKLAQGLIEHPPQHFIALAAIGTIADLVSLTDENRYIV 240
NP_815396    163 GVDVIVTDHHELPEQLPEAYAIVHPRHPQGDYPFGDLAGVGVAFKVATALLGELPIELLDLVAIGTIADLVSLTDENRTF 242
NP_390640    163 DVIITDHHEPGPELPDVRAIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLIAT 242
WP_000595011 161 VDVIVTDHHEIGSTLPEAYAIVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLV 240
WP_011275583 160 GVDVIVTDHHEIGHTLPEAYAIVHPMHPEYEYPFHFLCGAGVAYKLSQVLLDNPPNYFVSLAAIGTIADLVSMTDENRSI 239
WP_041636043 160 IDVIITDHHEIGQTLPDAYAILHPMHPDGSYPFHHLAGVGVSYKLACALNGQMNEHLLGFVAIGTISDLVSLTGENRALV 239
WP_014643867 159 GIDLIITDHHEVQEVLPDAYSIIHPKTSSRYPFQELAGVGVAFKFAEALLGRFPKDYLDLVVIGTIADLVPLQGENRVLA 238
WP_096551333 160 GMDVIVTDHHEPGEELPPADVIIHPRVPEGKYPFGELAGVGVAFKLAHALYGEVPEHLFEYVALGTIADLVPLTGENRYI 239
WP_112181451 162 IDLIITDHHEVQESLPEAYAIVHPKCSESYPFKELAGVGVAFKLAEHILGYFPTQLLDLVVIGTIADLVPLVGENRILAY 241
WP_013372638 251 SAFPGIRALLHVAGVEISTVTSVNIAFALAPRINASGRLDHAGRAVSLLTTEKEEEADQLAHALDLLNRERQQVVERIVE 330
NP_764873    241 KQGLKILNNHTPSSIKAILNQAGFNDEITEETIGFIIGPRLNAVGRLEDASLAAELLLSDEFEEAEFLAEQVEHFNHERK 320
NP_815396    243 VKMGLQMIQTGDRIGLDVLLQEAGVKKEAVSEESIGFTIGPRLNALGRLGEAAPGVELMTTFDEEQALEIAKYIDQQNNE 322
NP_390640    243 LGLERLRRTNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLMSEDSFEAEELAAEIDQLNKERQ 322
WP_000595011 241 KQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTDDEEEAAFLAEQVEHFNRERK 320
WP_011275583 240 VKQGLSFLNQSCPIQIKALLNQAGYNDTINEETVGFIIGPRLNAVGRLEDASLSAELLMTEDEEEAEFLAEQVEHFNVER 319
WP_041636043 240 KRGLKALNVDTPIGLKALLKQASFNGEITEETVGFIIGPRLNAVGRLDDARLACELLQIDNEDEAEWMSEQVDQFNIERK 319
WP_014643867 239 SMGLAAISRSKRPGVMALREVCGIEGEMNEETIGFTIGPRMNAVGRLQDATPAVELLLSKDREEAQQIASFINQINQERQ 318
WP_096551333 240 VRKGLEKLRKSNHPWVQALCEASGVKQHEIDEEIIGFYFGPRLNAIGRLGDAKPGVEFLMSEDLASATMGAKLLNEKNNE 319
WP_112181451 242 HGLKAISQSNRPGIDALKQTCSIQGDMTEEDIGFLIGPRINAVGRLQTAYPAVELLLTKDQEEAQEIATQINQLNQERQQ 321
WP_013372638 331 QAEQQLASKLNGDKLPSVIVLAGEGWNVGVVGIVASKLLDRYYRPTIILGIDTETGMCKGSARSIPALDIYSALTDCHEL 410
NP_764873    321 DIVSKITDEALLLAEEQIKQGHLFLLLAKEGWHEGVLGIVASKIVETYALPTLILNIDENQNHAKGSARSIEQVSMFDIL 400
NP_815396    323 RKDIVTTIAKEALDLFDPNAPVHILAKQGWHEGVLGIVAGRIMQETGKPTIILAIDESGTTAKGSGRSISALNLYEALNE 402
NP_390640    323 KMVSKMTDEAIEMVEQQGLDQTAIVVAKAGWNPGVVGIVASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFESLS 402
WP_000595011 321 DIVATITEEAMAMAETKVKKGDLFLLLAKENWHEGVLGIVASKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEIL 400
WP_011275583 320 KEIVAQITDEALAIAEEKVNNGNQFLLLAKENWHEGVLGIVASKIVETYALPTLILNIDLEQNHAKGSARSIEQVSMFEI 399
WP_041636043 320 EIVSSITEQALIDVEEKIANGNRFIVVAKEGWNEGVLGIVASRITEQYHLPAIVLNIDYDKGYAKGSARSIAQVSMYDSL 399
WP_014643867 319 KIVAEIAKEAEELLSSRSENLENVIVVAKEGWNPGVLGIVASKLVRQFDRPAIVLGIDPEKGEAKGSARSIDAFDLFANC 398
WP_096551333 320 RKEYVNSITEEAIEMIENNPDISNSSVLVVAKEGWNPGVIGIVASRLVEKYYKPTIVLSIDSELGLAKGSGRSIEGFHLY 399
WP_112181451 322 IVKEIAKEAIMMVESTPDENRNVIVVAKEGWNQGVLGIVASKLVRTFQRPAIVLTIQPEEGYAKGSARSIQAFDLFKNGM 401
WP_013372638 411 MEHFGGHPSAAGMTLSRDHLELFEERLNRYAGSILTPEDFIPIAEADMVCRLDEISLQVVEELELLQPFGMGNPSPRFVL 490
NP_764873    401 NDHQQLIDKFGGHHMAAGMTMSIDNIEHLHKELDMWMKELTVTTSLEPSIKVDAQLEEKEINIKNIKDIFQLRPFGTDFN 480
NP_815396    403 VREQFTHFGGHHMAAGMTLPVENIPFVQEHLAHFIEKNQIDMANGQELLISESLAVSQATTTFIDQLRILAPFGTDNTVP 482
NP_390640    403 ECRDILPHFGGHPMAAGMTLKAEDVPDLRSRLNEIADNTLTEEDFIPVQEVDLVCGVEDITVESIAEMNMLSPFGMLNPK 482
WP_000595011 401 SAHQELIAKFGGHHMAAGMTMDIENIESLAEGLNKWMKELSKTTSLDPVKPVDVLLTENDITIKNIRDMNRLRPFGTDFS 480
WP_011275583 400 LSAHQDLISKFGGHHMAAGMTMEIDYIEALEQGLNDWMFKLSEHTSLEPTKHVSVKLEENDISINNIRDIQRLSPFGTDF 479
WP_041636043 400 EETRNLITKFGGHHMAAGMTLPIENIERLEQALNNHLDTLIDGEIIQEIEIDAAVEMSDITIKNINDMDKLRPFGTDFSA 479
WP_014643867 399 MEVRDRFLHFGGHAQAAGMTLEVEKIDELRTALNDLAEQKLTEDDYQQVLDIEATLELGDISIKQIEEIDQLRPFGMGNP 478
WP_096551333 400 NELAKNRDILPHFGGHPMAAGMTLSAEHIDELRVRLHQQASTCLSDEMLTPTLYIDVPIDLSEVTVEAIEELQKLKPFGV 479
WP_112181451 402 QIKDQFLRFGGHSQAAGMTLLQENVDKIRHSLNQLAEEQLQPEDYKEQLDIEDSIEINSIDIGLVNELNKIAPFGMGNPK 481
WP_013372638 491 QGLQLREARKMGREKNHVKLLLEQNGLSLDAIAFRRGDLADFLQQQTDIDLLGELSINEWNGKRSLQ---------LMMQ 561
NP_764873    481 SPLFMVRDLIVKSTKGIGQDNKHLKLTLGHSGLTALFWNHGHLASELEPGQPIHIIGTLQINEWNGNqt-----pqFIIK 555
NP_815396    483 TFVFKEITPTQIRQIGADNAHLKFQMNQEGAQLDAIAFQMGPQADELAQGTADVAGQLSINEWNGRKkp------qLMVT 556
NP_390640    483 PHVLVENAVLEDVRKIGANKTHVKMTIRNESSQLDCVGFNKGELQEGIVPGSRISIVGEMSINEWNNrkk----pqLMIK 558
WP_000595011 481 RPIFEMDDLSVSSVKAIGQQKNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQINEWNGNqs-----pqLIIQ 555
WP_011275583 480 EKPLLEIDDNEVVDVRAIGKDKNHLKLVTGQLQLQSIFWKNGQLATQIEPGQPINLLGNLQINEWNGnqs----pqFIIQ 555
WP_041636043 480 PLLSLMNAKLTDVKQIGQNQAHLKMTVQNTLNALMWNEGARISGLPVGSQVNLAGTLQLNEWNGNVQp-------qMIVR 552
WP_014643867 479 KPLFHLMNTPKELRLIGSKKNHLKLQFQKEQSRVDGIAFGMGDVYPHLTPSDPLEVVGELGINEWNGrkn----lqIMVK 554
WP_096551333 480 GFEKPIFAIQQVSIRSMRKIGANENHIKMELEDAYGILDAVGFNKGYLFNEISYGVKLSIVGDLQINewqgrkkpqFLLS 559
WP_112181451 482 PLFHLKDKPNELRQIGSEKNHLKVSFRSDSVQLAGVGFGMGALYHSISEHTEIEAVGFLQINEWNGKks-----pqLMIQ 556
WP_013372638 562 DIRVQAPQIFDYRGVSDplaelerGLRIFhpsleERKNNVAVLIHPSSMLRPSSSVSAeslwlydkdgsvtpseGQKDTQ 641
NP_764873    556 DIAIDQLQILDYRSKRK-------NIQFK-----ESESNVAYVIHPKLKKSNSHYYHY----------------GEAIDR 607
NP_815396    557 DFAVLGRQLFDFRGKNN-------QTKPI-----PSEATAYLLFDEKNQKFISDPTANiivwsn-----qeelvEAVSQN 619
NP_390640    559 DAAVSEWQLFDLRGKRTwe----dTVSAL-----PSAKRAIVSFKEDSTTLLQTEDLRrevhvi-----sskdqAKAFDL 624
WP_000595011 556 DIAMNEQQILDYRSKRK-------SLPFT-----ENDENIVVLIHPKSDKVNANEYYY----------------GEEIKQ 607
WP_011275583 556 DIATNNEQILDYRSKRK-------QLNID-----PNDTKVAFLIHPKKEKLNHNYYYY----------------GDKIDQ 607
WP_041636043 553 HIKQDTMQMIDFRNVHPn------SYKFL-----KTEQAAFV-INPRKNKLNEHYFYYg-----------------EMIS 603
WP_014643867 555 DLRVNDWQLFDLRGSKHve----kKLVVP-----ANEYYAAVSFQGELNAPHnipv--------------ytpeGFTEGD 611
WP_096551333 560 DVQILEWQLFDYRGKVNan----hWVGSI-----PIEESSFIAFREETIQYFQAVIPSiqlv-----------edeIDNS 619
WP_112181451 557 DLAVNEWQLFDYRGSKLws----kKLEHL-----DKNKTIMLSFETKEAEHKVEGTYAtfeel-------rilaKEQDVT 620
WP_013372638 642 HfVKSLFVLEPPDTPEQFHALWSTfENVENVFLLHSISERGGRLVSPDRELFKRIYIVLSRMGtqLIDEKAMLPALSRQC 721
NP_764873    608 P-YDKIVFRDLPNTMVEIEQTLEH-SQISQLYLVLQHEKSIYFEGIPSKSLFKKCYKALINKK--ETDLIKEGMLLCEYL 683
NP_815396    620 Q-IEQLVFVDCPVEAITVKEIVEA-TEIQRIYMMFISPEEAYLNGMASREQFATLYKFILQQK--EVNLRSQLSKVANYL 695
NP_390640    625 D-GAYIVLLDPPPSLDMLARLLEG-KAPERIYFIFLNHEDHFLSTFPARDHFKWYYAFLLKRG--AFDVKKHGSELAKHK 700
WP_000595011 608 Q-TDKVVLRDLPTSMEDLSNSLQQ-LQFSQLYIVLQHNHSIYFDGIPNMDIFKKCYKALITKQ--ETNIQKEGMLLCQHL 683
WP_011275583 608 E-HEVVILRDLPNDLDSLKDSLKN-LNYSQLYLVLQHQQSIYFDGMPTSNQFKSCFKALMTKK--ETNLEQEGMLLCQHL 683
WP_041636043 604 G-YDKVVFRDLPESEERFLETYHS-LDATLIYFIFHTPRQLYFEGMPTAEKFKLLYKCIIIKP--EINLEKEGGYLLQTI 679
WP_014643867 612 M-VDGLLLLDLPERISQLEELLSR-VSVSKVFACYRLEESTFLKTWPTRDHFKWFYGMLLKRK--EFNLRQEGEQLAKRK 687
WP_096551333 620 L-SSYIVLLDLPKRIHTMEKLIEI-AKPQRIYAVFYTPNSQYFNGMPTRKHFAQYYTFLKNRP--FFNLNEHIHQLSKHF 695
WP_112181451 621 T-FKNIVLLDLPNQLEQLEEVFSL-LSPQNIFACYHIEEEHFLQSFPTRDEFKWFYGMLLKRE--QFNRKTELDILSKSK 696
WP_013372638 722 SCSVRMLSKVLDIFEDLEFLTRTDGQFRFVSNPPKRDLTASPRYQELYNMAEMERYLLDADTTQMTSWIMSLMK 795
NP_764873    684 NIKPEILTFMLKVFKELEFIYDEKGLIKINPAPNKQDIENSRIYQMRRARMEVEERLLYDDFLNIKEWIISKLT 757
NP_815396    696 NIQEKLLIFMIQVFFDLGFVTIESGVLNSIEKPDNRPLTESQVYQQRLKKIKTEEFLLYSDCQTIQQWLWNEED 769
NP_390640    701 GWSVETINFMTKVFFDLGFVKIENGVLSVVSGAKKRDLTDSQTYQAKQQLMELDQKLNYSSAEELKEWLNKLMK 774
WP_000595011 684 SVKPDTLKFMLKVFLDLKFVTQEDGLIRINQQPDKRSIDSSKVYQLRQQRMDVEKQLLYQDFSEIKNWIKSQLS 757
WP_011275583 684 NVKPNILKFMLKVFYELGFVTEENGIIKIVDNANKQNIETSRVYQLRQSRMEVEKLLLYDDFTQLKTWIKSQKG 757
WP_041636043 680 NVSPDTLLFMLDVYHEVGLIVKEGQFIKKQEVDKKVDLLSSSTYQARLNQLKLESKLLFSSFDELKQFILSNNS 753
WP_014643867 688 GWDHSMVEFISKVFFELEFVRIKDGIVTINSKPSQKDLKESTLYKEREERIYMEQTLYYSTYKELKEWFNNYLN 761
WP_096551333 696 GLNVDTIKFMTKVFFELGFVTIENGLLSVNEFASKRSLTEATTYQLRQQQIELEQKFLYSTYSELKQWFDNRMK 769
WP_112181451 697 GWKTNKIEFIIKVFSELEFVKMTDGVIYPNKQVRKRDLTESNAYQQSIKQAEMEKVLYYSSYRELKTWMDSQME 770
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