Conserved Protein Domain Family
VirJ

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COG3946: VirJ (This model is not part of the current CDD release)
Type IV secretion/DNA transfer system protein VirJ [Intracellular trafficking, secretion, and vesicular transport]
Type IV secretion/DNA transfer system protein VirJ; is part of the Pathway/BioSystem: Type IV secretion system
Statistics
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PSSM-Id: 512648
Aligned: 80 rows
Threshold Bit Score: 339.8
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_023598489  90 MPQaaa--------aaAGAAAFrg----aGNATPEIMTHGRFENVPIFRPDGEPNATVLFFSDDDGWTPRAERMARALAE 157
WP_119048672   1 MKYll--------------------------------------------------lILCLGTFTVS-------------- 16 
WP_180904752   1 MKTkyfil---------------------fgliiTT--------------------IGLYIIRTKGdd------------ 27 
WP_012025175   1 MNKkiili----lsifICSTVV-------FAAAQDTIRVGAFGKVTLYKPKTDPNAVVLFISGDGGWNSGVVEMAKNIVD 69 
WP_162333980   1 MTArkyi----------------------------------------------lllLTMFITATVVn------------- 21 
WP_014217107   1 MKYfm--------------------------------------------------aLALLLTFNLI-------------- 16 
WP_008584896   1 MIKf---------------------------------------------------fLIGLLSATSLf------------- 16 
WP_015808253   1 MKFki-------------------------------------------------llFLLILTYQDYt------------- 18 
WP_015808549  13 MNKtlsmvkagltsvfICLFLMlfyikpaLAIKEEVISHKTFGKTVIYIPQTIPTSVALFVSGDGGWQAGVINMAKNLAL 92 
WP_015808252   1 MANknly----------------------------------------------lliVTSLLSl----------------- 17 
WP_023598489 158 TGALVAGIDTARLMANYTKddIACVYAAGDLDNFGRWVEAAVKLPGYTPPILVGDGVGGTFAYAMLAQAGSDTFSGALSV 237
WP_119048672     --------------------------------------------------------------------------------    
WP_180904752     --------------------------------------------------------------------------------    
WP_012025175  70 QGGLVAGIDIQHYFKAIKKekNKCYYPAGDFEELSLILQKKLKLKQYFKPVLIGYSSGATLVYGMLAQAPANTFSGAVAL 149
WP_162333980     --------------------------------------------------------------------------------    
WP_014217107  17 -----------------------C-------------------------------------------------------- 17 
WP_008584896  17 ------------------S------------------------------------------------------------- 17 
WP_015808253  19 ------------------Q------------------------------------------------------------- 19 
WP_015808549  93 QGALVAGIDARQYMAFLSRssSSCYYPAGDFEQLSMMLQKKYKFNSYTKPVLVGYSYGATLVYGLLAQAPAGTFKGAIAL 172
WP_015808252  18 ---------------------SGCs------------------------------------------------------- 21 
WP_023598489 238 DFCPVLPMSRPLCQGEGVHFgrgvthtaggapMRLLPAPvMSAPWLAMGGPaggpyaraprcPDHVAQAFAARTPNANWl 317
WP_119048672     --------------------------------------------------------------------------------    
WP_180904752     --------------------------------------------------------------------------------    
WP_012025175 150 GFCPDIETDRTLCDGSGLTShvlk----egkaYYLDKTEkLTAPFIVLQGAtdq------vcNYADTKKYMDGLKEGKLi 219
WP_162333980     --------------------------------------------------------------------------------    
WP_014217107     --------------------------------------------------------------------------------    
WP_008584896     --------------------------------------------------------------------------------    
WP_015808253     --------------------------------------------------------------------------------    
WP_015808549 173 GFCPDITLKKPLCKGNGLKShvlv----pgksYYLERTEkLAAPFIALNGIkde------tcPFQATKTFLTGMPFAELv 242
WP_015808252  22 ---------------------------------------lLKRervt--------------------------------- 29 
WP_023598489 318 vggl-agslgAMDTSgttptpvladwVTQYKNAFRRLNAHHvag-----------taRPPAAVAD-LPVIEV-PATgkpd 383
WP_119048672  17 -----------------------------------------------------------QAQTTS-LPVKIM-AGN---- 31 
WP_180904752  28 ------------------------------------------------------------iDIKDpLPLKIW-ENK---- 42 
WP_012025175 220 tlskvghgfsVTKNW-----------LPQFIEAYKEILNTPnyarqkaeqnpllkeqNLAPLPFE-MPLTLI-PAK---- 282
WP_162333980  22 ---------------------------------------------------------AQQRDLSK-LPVTVKvPAAg--- 40 
WP_014217107  18 ------------------------------------------------------------AQDTQ-LPIKAF-PAK---- 31 
WP_008584896  18 -------------------------------------------------------------KAQE-LPLKTW-KG----- 29 
WP_015808253  20 -------------------------------------------------------------AQTA-YPTHPLf--K---- 31 
WP_015808549 243 tlpkvghgfsIADNW-----------LPQFYQSYKKIIASPsaikqkn---aasvqrMPDKLITT-LPLNLL-PAP---- 302
WP_015808252  30 ------------------------------------------------------rhnGIARSDFD-LPVFAY-PAAd--- 50 
WP_023598489 384 aNLAD--TFAILLSGDGGWAGLDRDVAGALSAHGIPVVGVDSLRYFWSARTPASGALDIDRLMRFYQTRWNKKRVILVGY 461
WP_119048672  32 -DASK--PIIFYATGDGGWTKFSLALVQSFNQAGYPVVALNSKDYFWKKKTPAKTAADVGALLSQYLQTWKREAVILVGY 108
WP_180904752  43 -NETK--PILFYLSGDAGLGPFSKSICKNLYQKGYDIYALNSKVYFWHERDSKKTAEILAQFLEEKLKHHKNQEVVFIGY 119
WP_012025175 283 -NKDEnlPIAFLISGDGGWTSFDQSVGEALAEKGISVIGLDAQKYFWNAKTPLETSAAISKAVEHYLQQWNKKTFILAGY 361
WP_162333980  41 -ATAL--PVVFYITGDGGMKKFSVDMVNTLAGKGYPVIGLNALKYFWSKKTPSQAAGDVAALMEYYGAQWKNRSFILIGY 117
WP_014217107  32 -DTAK--PLVFYISGDGGWTGFSDAFLNSMNKAGYPVLALNARKYFWKKRTPAGMTAELSQLINKYMTQWKRDSIVLIGY 108
WP_008584896  30 -NDRN--PLVLYISGDGGFNTFTNGFCASVNKKGYTVTALNSRSYFWSKISPEQAAAAISAYIDDAFKSRAGQQLILLGY 106
WP_015808253  32 -SSHK--PLVLFLTGDGGWNTFSMQVADELGKNGYPVISLDTRKYFWEQKTPAGFAADVNTIVSKYLNQWNKDEFCVVGY 108
WP_015808549 303 -SSDQ--PLIFMMSGDGGWTSFDQSLAESFAEKGMAVVGLDAQKYFWNAKTPQQTAAAIADAISYYMQNWKKKKFILAGY 379
WP_015808252  51 sNKTG--TLIVMLSGDGGWLDFEDSLSVQFSKAGFNTVGFNCRDYFWERKTPRQTAEDLSMLLHVYIQQYNSTKIVLCGY 128
WP_023598489 462 SQGADVLPFMVNRLPPGGRERVALLVLMGLGQKADFEFRMTNWVMS---SQNGLPIRPEVERLPDGMAMCIYGADEDDSN 538
WP_119048672 109 SFGADVTPFIQNYLDRNIAGKTTHMVLMLPYKSTDFEVHFSEMLGIa--RKDAWSVPDEINKVS-KPILFVLGTEKDQFP 185
WP_180904752 120 SFGADAIPFIINQFPTKTKNRIHQLILLDPYETADLEIHYKNLIFEn--VSGKWNTIPEINQLPNLHLSIILSDYGKNYP 197
WP_012025175 362 SFGASVVPFAAANFPEPLKEKLKGVYSLSPDVKADFEIHIADMLSLg-sSKDNYDVISEIKKIKAYNPVCFFGTEEDPET 440
WP_162333980 118 SMGADVLPFIYNNLPLGLQAQVQHLVFMSPSSSTDMVVHLSDMLGKt-sTPGSMSVPAAMNTITNKPLLLISGKDEKDFD 196
WP_014217107 109 SFGADVTPFLFNYAGAPFTKKVSDLVLMLPYTSTDFEVHLTEMIGLs--SHDAYSVVTEVNKIT-KPILFILGTEKDQFP 185
WP_008584896 107 SFGGDVSPFIINRLSASAKKHLASVILMDPSTSTDFEIHVSDMWGKp--KKRSMDVIAEINKMGNHKTAIILGEDGKDFP 184
WP_015808253 109 SFGAEVGAFLPTHLPAATLEKFKSLVLLSPGYSNSFEVRFINMIATkntNKDKYKVYPELLKSK-IPVWCIFGEEEKTDI 187
WP_015808549 380 SFGACIAPFIANRLPENLQHNLSAVCMLSPDERADFEIHVADMLSId-gQDEPYNVLAEMKKARTFKLIVLFGDDEDPAT 458
WP_015808252 129 SFGADVVPFIYNRLRPHLKSRITALGMLSPFATTDFKVHTSDLLNIa-kDNRKYKVKAEIDRIR-IPVFCFYGKDEEPKA 206
WP_023598489 539 CPGLDPR-RVQVVKMPGGHHFDGN-YTALADKILQGVA 574
WP_119048672 186 LNALTIK-NYSSITIDGGHHFDDK-ADKVAQQVLAWVK 221
WP_180904752 198 FNKITLT-NKNIISLGGNHHFNRN-YQKVTETIIKQLS 233
WP_012025175 441 RKRFAES-DIKTIQIPGSHHYNND-YAKVTESIIKEMK 476
WP_162333980 197 YKWLTIN-NYRQLVLPGGHHYNDD-AVGVVRQILSHLL 232
WP_014217107 186 VQTLSNK-NYKVITEGGGHHFDDK-ADKVAGYVLNYIK 221
WP_008584896 185 LRSVSLK-NFRSERLPGGHHFAGN-TDGLAATIQKYM- 219
WP_015808253 188 SQELKETnKIRKITIPGSHHYNDD-VQLVVSGAIKGLV 224
WP_015808549 459 TKQFRQE-TSRVITLPGGHHYNND-YTGIVNYVIKSL- 493
WP_015808252 207 QENILKP-GFYLKLLAGDHRYEEStYQEIVNTLTNTIN 243
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