Conserved Protein Domain Family
TssB

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COG3516: TssB (This model is not part of the current CDD release)
Type VI secretion system sheath component TssB/VipA/Hcp2 [Intracellular trafficking, secretion, and vesicular transport]
Type VI secretion system sheath component TssB/VipA/Hcp2; is part of the Pathway/BioSystem: Type VI secretion system
Statistics
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PSSM-Id: 512606
Aligned: 445 rows
Threshold Bit Score: 65.1854
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_136918682   1 Ms--PISDKY-RSRLQLTYR--------TNITGTPIAQRLPFRVLVLGEFLGKDArDQglLPDLRERKISSIEvgslGTK 69 
ARA91975       1 Ma----dSHSpSIGLRISSDpddtrieqPRAEPAREVEALPLRVLYVADLTPLAQ-----PDWTAGSRVVSVD----RYT 67 
WP_050431079   1 MagetKGFLTgQMKFNVSDD----------VSKGAEAPLLPLRLVVVADLVPRDP-HN--AGASPPASAIRID----PSR 63 
WP_059365541   1 Ms--KAGSVApKERINIKYT--------PATEGQVDEIELPLKLLVTGDFKGSPE-----ELSLEERKTVSID----KHN 61 
WP_259779336   1 M---RDASVApKERINIKFV--------PATGDQQEEVELPLKMVVVGDFTGRPD-----DTMLEERNAVEID----KNT 60 
WP_010654946   1 Mt-nKDQSVApKERINIVYK--------ALIEGVEEEIELPLRQLVLGEFYPEGI-----STPLEKRQTVNIN----KDN 62 
WP_023276515   1 M---SDGSNApKERINISYK--------AKTNGAAADVELPLKLMVMSNFTSDTN-----NIPLEEREPVSIN----KVN 60 
WP_010953544   1 Ms-kNTGSVApKERVNIKYV--------PATSDEQAEVELPHKMLVLGDF-GLDD-----SRALEDRQVMRID----KHT 61 
WP_010954866   1 Mt-kRSDSVApKERINIKYV--------PATGDEQAEVELPHKMMVLGDF-GLDD-----SRSLEDRQVMRID----KHT 61 
WP_012237478   1 Mt--eKGVLGdEFRFHVGED----------GGAVERGPLLPLRVLVVADLTPRDP-HN--AGASPPAGAIRVD----ASR 61 
WP_136918682  70 VDDFIKDMKPWMRIpeSVRAKLAtkvqgsvtffstatpktyslripaatatqegvsvaisgtasftstkaqngvidists 149
ARA91975      68 FSDLFRSLAPQLRL--EVPNRIS--------------------------------------------------------- 88 
WP_050431079  64 FDALFAALRPRIAI--DVPSVLA--------------------------------------------------------- 84 
WP_059365541  62 FDAVMKQSDLSIEI--AVPNRLE--------------------------------------------------------- 82 
WP_259779336  61 FASVLKEMNLERTL--EVRDVLR--------------------------------------------------------- 81 
WP_010654946  63 FNDVLKEHHLKLSM--RVPNRFS--------------------------------------------------------- 83 
WP_023276515  61 FNKVMEQMGITTNF--NVKNTIS--------------------------------------------------------- 81 
WP_010953544  62 FNSVLNDANVSLDV--TVPSRLG--------------------------------------------------------- 82 
WP_010954866  62 FNNVLNDADVSLAM--SVPSALD--------------------------------------------------------- 82 
WP_012237478  62 FDNLFTMLRPRLAI--EVPSVLA--------------------------------------------------------- 82 
WP_136918682 150 gltvtgkitlvpGDkpgkvqpkgedveltisgtvatplldlrkstptpsgqlmllasskitvkaaditivdntadpeGtt 229
ARA91975      89 ------------DTp----------------------------------------------------------------- 91 
WP_050431079  85 ------------D----------------------------------------------------------------G-- 86 
WP_059365541  83 ------------ENa-------------------------------------------------------------eD-- 87 
WP_259779336  82 ------------DDa--------------------------------------------------------------D-- 85 
WP_010654946  84 ------------KNk--------------------------------------------------------------E-- 87 
WP_023276515  82 ------------PD---------------------------------------------------------------A-- 84 
WP_010953544  83 ------------TAp--------------------------------------------------------------D-- 86 
WP_010954866  83 ------------ATp--------------------------------------------------------------N-- 86 
WP_012237478  83 ------------A----------------------------------------------------------------G-- 84 
WP_136918682 230 lllkiensfpSALERTLPFTSLDSFSPDGVATNIPELHRLRVIRELVQGLGASLRNNPELRKVMRDSLRDKPEDFKKLQa 309
ARA91975      92 ----------KRLEVDLHFDGLKAFHPAEVARQVPVLARLVQMRDLVLQVKEGRTDLEAFRARLEAVGVEPDEVDRLYR- 160
WP_050431079  87 ----------RNTRVDLAPTSLKSFRPDGLCSEVPLLRALLDGRLALDRLRDGSITVEQARGELQRLWSGSPFAEEVLG- 155
WP_059365541  88 ----------QDIGVNLKIESMSDFSPDSIAKQVPQLNKLLELREALLALKGPMGNIPAFRHKLQELIADPNAREALEK- 156
WP_259779336  86 ----------AMLNLKLAFESLQDFSPDALIEQVPELKKLSNLREALTALKGPLGNLPAFRKALSEIIDDPEKREALMS- 154
WP_010654946  88 ----------DTVNVDLKFETMRDFDPDGILHQVPQLQKLFEVREALKALKGPLGNIPEFRRRLDAIVKDSAAREELIK- 156
WP_023276515  85 ----------DEMSINLNIKSMTDFSPDNIVKQVPELQKLMALREALTALKGPMGNVPEFRKKLLAILSDAEKKEQLML- 153
WP_010953544  87 ----------TELAVHLQFRSINDFGPDRIARQVPELNKLLALREALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQ- 155
WP_010954866  87 ----------AELAVNLQFKSIQDFGPDRIARQVPELNKLLQLREALVALKGPLGNVPTFRKQLQQLLNDAHARKQLAQ- 155
WP_012237478  85 ----------RAVRVDLAPAGLKSFRPDALCAEVPLLRSLLDGRRVLDRLRDGSATLDQARAELDRLWGGSPLVRDILG- 153
WP_136918682 310 wakenypALTIH--------------------PAA 324
ARA91975     161 -------TLAAP--------------------PPA 168
WP_050431079 156 -------LLPVGgrsaasa-------paafssAPA 176
WP_059365541 157 -------ELAII--------------------LEK 164
WP_259779336 155 -------ELGSR--------------------ETN 162
WP_010654946 157 -------EIKEK--------------------K-- 162
WP_023276515 154 -------EIAKS--------------------KKN 161
WP_010953544 156 -------ELDLV--------------------LEA 163
WP_010954866 156 -------ELDLV--------------------LEA 163
WP_012237478 154 -------LVPERrdaspdrsapaaerpaarapAPA 181
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