Conserved Protein Domain Family
COG3372

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COG3372: COG3372 
Predicted nuclease of restriction endonuclease-like (RecB) superfamily, implicated in nucleotide excision repair [General function prediction only]
Statistics
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PSSM-Id: 442599
Aligned: 72 rows
Threshold Bit Score: 355.708
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_075055219   1 MLAAPLLRARTtRNGSIIPLFCT--RDEEIELAGRLIQEFEASWKnrESKAELDGRISDI-ESEHn-RDFKLVRGLCALL 76 
WP_011556051   1 MLTRELLNFRV-RQGVLRPVFVKrdDTELLTFAQDLLAEVAASRG--GQRDDIEESLGLK-AGAF--TKPKVARGLVKLV 74 
WP_011712336   1 MLTKEHMRFSQ-RGGILKPGFIDvnNRTLLNAVEALTELFQHGAG--LTRAELAEQCEPIiATGF--KNPKILRGIEKLL 75 
WP_013377484   1 MLTRDLLLFRV-REGKLRPSFIKreDPELLALATELVAEVERARG--QTRDELEETLALR-AGAF--ARPKIARGLVKLL 74 
WP_013565256   1 MLTGNLVRVRY-SKSKVIPMYLDptNPDLLETAENLLLIFRDGVG--RTRGELEEEIQTL-LGEGppLSNIAQQGLAKVL 76 
WP_015244655   1 MLTGNLVRVKVtSKGRVMPLYLSrdNAQWLEVAESLLLIFREGVG--TTRYEIETEVHEL-VGEG--LATLAHRGLAKVL 75 
WP_014399415   1 MLTRELLASRV-REGILRPSFVKthDPSLQALAKELLADAETFRG--QSRDDVEESFSLK-AGAF--SRPKVARGLVKLL 74 
WP_047860270   1 MLTRELLLFRV-RDGKLRPSFVKreDLALRTLATELIAEVAAGVG--RSRDEVEETLALR-AGAH--SRPKVARGLVKLL 74 
WP_076346600   1 MLTGDLVRVKI-SKERVLPLYLNreSAQWLEAAESLLLIFREGVG--MTRGEIEAEIDEL-FGSGg-KATLVHRGLAKVL 75 
WP_010036563   1 MLTGKMVRVRH-AKNKLVPLYIEpsDESLRALAEQLLLAYRNAPG--RTRGEIEEEFSDL-IPEG--PRGLLPAGLAKLL 74 
WP_075055219  77 ERRCTFGSaitssspssssssfvknsigadavtsITLGDPATVRKALFEESSRRgf------------------aLTDLE 138
WP_011556051  75 LDRLLFDE---------------------------PAPGVTEARWERIKAAGQVlr-----------------alPPDAT 110
WP_011712336  76 LDRCQFAE---------------------------PDESAMQRRSAIFAKAAELle------------------qAHLEE 110
WP_013377484  75 LDRALFDE---------------------------ATEGAAQARWEHFQTAARVlr-----------------tlPPEAP 110
WP_013565256  77 EDRAEFEV--------------------------VSEAHPEELRRVVFTLAAEErrslr------------sagyRAPFR 118
WP_015244655  76 EDRAEFEV--------------------------VADVPPETLREKLFSAAADYrrslr------------aaghRAPFK 117
WP_014399415  75 LDRLLFDE---------------------------AGEGATEARWRTLLVGAKVlr-----------------tlPPDTT 110
WP_047860270  75 VDRMLFDE---------------------------PSEGISEARATAFREAARVlr-----------------slPAGAT 110
WP_076346600  76 EDGSEFEV--------------------------VADVPPDVIREKVFTAAAAHrktlgkpgpeanplpeagigpRPPFR 129
WP_010036563  75 EDRCEFEV--------------------------SADHPPDQLREAVFKAAAVEraea--------------ansMRPFD 114
WP_075055219 139 RKEIIDLVASRLH--LSADAIASIMWSDLDDNLVLEKF--DTIDAKSLVGWYNLALVQTLLFNCTKLEFSVSGG--LNWK 212
WP_011556051 111 VEGFEARLAQTLP--VPLSEAREALYSDLPGHRRLVGWdgEALNAQDLLDRYNLALAQGPLLSARRLRLRAQAPdlLRVR 188
WP_011712336 111 LPRYRSAIGQAFN--SDPEQLAAALYNDLPERQPLLTF--RPLQAQKMLYRYNAAQVQGLLLRAERLTLTFNANdpGTLR 186
WP_013377484 111 VGLYEARLAEALP--APLEEVREALYVDLPGHRRLLDW--ETLTPPELLDRYNLALAQGPLMGARRLTLRARAPglLRVR 186
WP_013565256 119 RDKVLNEAAQRLN--LTPDQVAAGLFADLKDENRMLGF--DDLSPERLIQRYNVALAQAVLLKATLVTVRLRREppDRLR 194
WP_015244655 118 RDHVLEVVGRELG--IEPEAVAAGLFADLKDENRMLKF--DDLDAQRLVDRYNVALAQAILLRAVLVTAVVRNEkpARYR 193
WP_014399415 111 LEAYEARLTEALD--APLPDTREALYSDLPGNRKLLGWdgEALTPQGLLDRYNLALAQGPLLNARRLTLRARSPelLRVR 188
WP_047860270 111 VEAYEARLSEAFP--RPLPELREALYADLPGHRRLQGW--EALTSAELVDRYNLALAQGPLFDARRLTLRAKAPelLRVR 186
WP_076346600 130 RDQVLAAVADELK--VAPQTLIDGLFADLRDENRMLSF--KDMTAQRLLDRYNVALAQTVLLRSVRVVVEVKNEtpARYR 205
WP_010036563 115 RAAVMRQVAEQLSltIRPEDIDRSLFADLKDEQRVISF--DDITAEQLLNRYNVALAQAILLRATLLEVRVYAEtpARFR 192
WP_075055219 213 RILRKVKRLGLMYYLLQQQeskdgeRSRVVCSIEGPLSLFRLTDRYGTALAKLLPSIVflsKGGEWSIDAWIMRRTmeGK 292
WP_011556051 189 KVLRWLKFCRLVAEVWRDD-------DNWALDVEGPGAMLALQKKYGLQLATFLSVVP---VLERWELTATVELS----R 254
WP_011712336 187 LLLQQLRFHRLLARVTRLP------HEQVKMVLDGPVSVLEQTQKYGLQLALFFPILL---LQKGWSLEALIRPQGk--- 254
WP_013377484 187 KVLRWLKFCRLVAEVRREG-------DDWALEVEGPGAVLSLQKKYGLQLASFLSVVP---VLERWELAAEVDAHA---R 253
WP_013565256 195 RLFRRLKFHRLLHRIEGSP------TQGYVIQIDGPMSLFTSTTKYGLQLALVLPAIL---QCREFELEAELRWGP--KR 263
WP_015244655 194 QLFRQLKFHRLLYRVEGSM------TTGYTFQIDGPLSLFSATNRYGLQMALFLPTLL---HCAEFRLDAELRWGP--KR 262
WP_014399415 189 KLLRWLKFCRLVAEVRRDG-------EDWSLEVEGPGAMLALQKKYGLQLASFLSVVP---ILERWELSAVLEDA----R 254
WP_047860270 187 KVLRWLKFCRLVAEVRRED-------EDWVLEVEGPGAMLALQKKYGLQLASFLSVVP---VLKHWQLTASLESP----R 252
WP_076346600 206 QLFRQLKFHRLLYRVSGTM------RDGYVFHIDGPLSLFSATTRYGLQMALFLPSLL---RCCDFRLDAELRWGP--KR 274
WP_010036563 193 QLFRAVKFHRLICTIQETP------GGSYKLTLDGPLSLFSSTNKYGLQLAMFLPTLL---HCKAFDLRANIRWGA--ER 261
WP_075055219 293 KtLYEFKLSDSEapllltdPFYYnnnngdessRREEGQQqrsrlapdyFDSV-VEEKFARRFEAAaTAGWKLIREPDPLI 371
WP_011556051 255 R-QATLMLSHKD-------PLRS---------PLPAALG---------HIPP-EVASLAEGFA---DDAWELDLTPLPRH 304
WP_011712336 255 -pAATLKLDPSA-------PLSY---------WNSHTRA---------YRPDaEFAQFAANFREK-FPDWTVDEHPPLLD 307
WP_013377484 254 R-RVMLVLDQRD-------PLVS---------PHPSALG---------HIPP-EVATLAQGFE---DAEWALDLTPLPRH 303
WP_013565256 264 E-PRSFSLSHRD-------GLVS---------HYRDADS---------YIPA-EVRGFEERFRQI-APHWELAESSDLFE 315
WP_015244655 263 D-PRSFHLESSD-------GLIS---------HQADTGT---------YVPA-EMGAFLDRIRQV-ASAWDVTESTEVIE 314
WP_014399415 255 K-RSTLQLSNED-------PLVS---------PLPAALG---------HVPP-EVTALAEGFE---DAAWELDLTPLPRH 304
WP_047860270 253 R-RVTLVLDEKD-------PLVS---------PHGPALG---------HIPP-EVASLAEGFD---DADWELDLLPLPRH 302
WP_076346600 275 D-PRSFHLDPSL-------GLVP---------HQADTGV---------YVPP-EIPAFAERFRQV-APAWELSEVTEVVE 326
WP_010036563 262 K-EKTFQLSGLD-------GLKS---------HAPDFGV---------YTPP-ELQMFADSFAAK-VKGWTIDSDPHPIL 313
WP_075055219 372 VSdG-RALIPDFMFEKY--GRRVYLEIVGFWTPEYLERKLKKLADIiignynaaasstttPATELFIALNKDLACSNavl 448
WP_011556051 305 VG-AsGLCVPDLTFRHRasKREVALELFHAWHAAPLARRLTELRSR--------------PDAGLLLGVDRALAKEAv-- 367
WP_011712336 308 LG-QqEICAPDMAFHKG--EHPFYLELFHRWHATPLLRRLEHLSKRg------------rDKPPLILGVERSLLKNSq-- 370
WP_013377484 304 MG-AsGLCVPDLTFRHQqtGREVALELFHAWHAGPLARRLAELRSR--------------PDPLLLLGVDRALTRTG--- 365
WP_013565256 316 LG-GeGVWVPDYRFTHRhdGQTVFVEVVGFWKSAALERLLRTLPRH--------------GPPLWLLSVTEKLKVDEa-- 378
WP_015244655 315 LG-ReGVWVPDYRFVHKatGLDVFLEVVGFWKRSSLDRLLRLLPQH--------------GPKRYVLAISDRLKVDEe-- 377
WP_014399415 305 TG-AaGLCVPDLTFRHRktGQEVALELFHPWHAAPLSRRLAELRAR--------------PDAGLLLGVDRALAKEAa-- 367
WP_047860270 303 TG-AaGLCVPDLTFRHRhtGREVALELFHAWHAGPLSRRMEELRSR--------------PDAGLLLGVDRALAKDAq-- 365
WP_076346600 327 LG-ReGVWVPDYRAVHKatGVDVFIEVVGFWKKATLDRLLDQLPRL--------------GPPRFVLIISEKLKVDEd-- 389
WP_010036563 314 LP-S-NTWVPDFKLTHTetGKEVFVEIFGFWRKGDIETHYRNLSKG--------------VPGKFVLCVSEQMRADDe-- 375
WP_075055219 449 sSLSIHLIPKd---RLIlYGSDAVPVRPILDYLKS--------------IDK 483
WP_011556051 368 -EREALEAHP----QVV-LFNGFPSARKLRERLAK--------------LEP 399
WP_011712336 371 -VAQALESSPlfaqRGF-MFRDLPSSRTLAKLLETli--------------- 405
WP_013377484 366 -EREELEAHP----QVV-LFNGFPSARKLRERLSK--------------LGE 397
WP_013565256 379 -NGPDWWSHP----RLL-KFREVPNASELRDRLDT--------------LIG 410
WP_015244655 378 ---SIEGLSG----PVL-RFKEIPNSNDLSALLDR--------------FLK 407
WP_014399415 368 -ERQVLEDHP----QVV-LFNGFPSVRKLRERLAR--------------WDG 399
WP_047860270 366 -ARALLEAHP----QVV-LFHGFPSAKRLRARLSP----------------- 394
WP_076346600 390 ---AVSKLPN----PIL-WFKEIPSAPELAGILDR--------------LLN 419
WP_010036563 376 ---SEVAFGD----GVY-RYKRTPLADEVARLAARvagvdmggptiaalLTE 419
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