Conserved Protein Domain Family
AbfR1

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COG3355: AbfR1 (This model is not part of the current CDD release)
Transcriptional regulator of archaellar biosynthesis and archaeal biofilm formation AfbR [Transcription, Cell motility]
Transcriptional regulator of archaellar biosynthesis and archaeal biofilm formation AfbR; is part of the Pathway/BioSystem: Archaella
Statistics
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PSSM-Id: 512587
Aligned: 356 rows
Threshold Bit Score: 48.0326
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
UYP48214       1 MTVSSIl---------------------------------pDKSi-------lVGNIIRH-----------VFNLSKK-- 27 
WP_127015509   1 -----------------------------------------------------MQDITVGn----------SQVIRDW-- 15 
WP_019378096   1 M-------------------------------------------------------IIKN-----------QEFLKKE-- 12 
WP_131837300   1 MPSPYAad--------------------------------tPLKtl-----ifVAKLMDCivederegetaSHRLKQA-- 41 
WP_165327904   1 MADMLAs----------------------------------NRDp--------RVDLIAM-----------VYRLHGAmr 27 
WP_089672271   1 ------------------------------------------MS---------TATDGRA-----------CVAETTA-- 16 
WP_070365528   1 MAQTIKemv------------------------------ysSVS---------PEEVFES-----------FYGLNHR-- 28 
WP_004041727 334 LWDDPTpqie----------------------------------------asqESVIMRT-----------LSRLSDT-- 360
WP_153021785   1 MSAPaqpt-----------------------------rtrgDHDavatpggrtASALFRLdqhrr--vaehHGRLNVA-- 47 
WP_302081064   2 IIENEGelvinfgggprelylaigtatlahpdsvdktlqfsDLDg-------sVEEIPLPq---------iTGAIPES-- 63 
UYP48214      28 ---------------QLECFMNIVEMeNSGTCILNLVDVMDSERSIIQKNLKVLMKKGLVERKSVTLtEfkerctlnnre 92 
WP_127015509  16 ---------------NLGGIFKLIHK-LGPISRKELAESTGYSAATVSNHVKTLIKEGFVIETEKGN-S----------- 67 
WP_019378096  13 ---------------NQSLVLELILT-NGPISRAEIAKQTKMSPTSASRIVGSLLESGLIREVNLSN-E----------- 64 
WP_131837300  42 ---------------GIMSYIYMMhlnGEKITVSKLKERLKAPRQVIVELFKSLEDRGLLTHSTETH-D----------- 94 
WP_165327904  28 nrfagpnantglvllEALVLGAIVv-nRDPPTVPEIGRMLGFTRQSIQRAVNKLIALELVEPRANPRhKrapi------- 99 
WP_089672271  17 ---------------SAKLLYTVLCH-EGGRTQSALVQETGLNRETIQRSVSKLVDCGVVTESPDPT-Dar--------- 70 
WP_070365528  29 ---------------ERKTYETLLTA-EEPLSVETIAERMDCSLSTAYRYIDTLETHNLVHETGLYD------------- 79 
WP_004041727 361 ---------------DRDVLKHLALT-DGGTRVGELEDGTGWSSTTIYRVLQRL--SGLL---E----N----------- 404
WP_153021785  48 ---------------DGRLLWLFSd--ETPRTLRQIAEELNLEQSTVNRQVNAAHQAGLLERRRDPE------------- 97 
WP_302081064  64 ---------------ATETLDAVVRn-ESAIGIPELAEELNRAKSTISRHVRQLEAANVVTAEMRGK------------- 114
UYP48214      93 dispktNK-GYL---YIYSP--LSS-KELTSKIESI---LS-----RWNTTISEYFSTLQ 137
WP_127015509  68 ------TG-GRK---PVYLT--VNPnkgyifsidievnkvkivmfnlklnlvmksiipil 115
WP_019378096  65 ------GI-GRK---ATYLL-------------------PD---------------Ensv 80 
WP_131837300  95 ------GGrGRV---FVYALa-----DKA----------LSl------------------ 112
WP_165327904 100 --fvatQA-GRDrmrEVQRPs-----EALAEELAAE---FDvaratALRDELAALLSAVQ 148
WP_089672271  71 -----rKR-YEPi--TCHC----------------------------------------- 81 
WP_070365528  80 ---------GEYl-kSGYTA--EDP-AVIAEHMFDY---VD-----FKVEKCRKNIEAVT 118
WP_004041727 405 ------DG-GVVk--WVSSKi----aQEVRELVSIAddvVD-----SVAGRIENVL-NVD 445
WP_153021785  98 ------KGa------YVFEAsaSGL-QLFEDAIART---LG-----QYDAALAALGDDDA 136
WP_302081064 115 ---------------TKYVK--STFsGELRSQMKSV--------------------EQD- 136
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