Conserved Protein Domain Family
TssD

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COG3157: TssD (This model is not part of the current CDD release)
Type VI secretion system tube protein TssD/Hcp [Intracellular trafficking, secretion, and vesicular transport]
Type VI secretion system tube protein TssD/Hcp; is part of the Pathway/BioSystem: Type VI secretion system
Statistics
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PSSM-Id: 512562
Aligned: 693 rows
Threshold Bit Score: 46.0071
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_254272566  14 ANRrdFMKFgglaaGgllgtgIAggtpmaGvhpqvspdapavdEAANAyllynardivGepfstpRpdlEDASTLLAVEW 93 
WP_012703522   2 DAI--ILDLg---dD------IK------G-------------DSQIE----------G------Y---TDKIELMSYSH 32 
WP_070531300   2 DAI--ILDLg---kD------IK------G-------------DCALE----------G------Y---KDKIEIMSYSH 32 
AHY11620       2 DAI--FLKLd----D------IK------G-------------ESQVD----------G------F---KDQIEIMSYSH 31 
WP_237381108   2 FNI--FMTLq----G------IE------G-------------DTLTK----------G------Y---EKHVGVSSFSH 31 
WP_095977549   3 SNI--SIKFd----G------LP------G-------------SSTAT----------A------S---KEEIELLSYNH 32 
NP_251057      2 DAI--ILDFg---sD------IK------G-------------DSLLV----------G------Y---ENKIEIMSYSH 32 
WP_093390716   2 DVI--ILEMp----G------VD------G-------------ECLLK----------D------Y---VSKIECLSFSH 31 
NP_462046      2 DAI--FLKLd----N------IK------G-------------ESQVE----------G------F---EDQIEIMSYSH 31 
NP_463368     30 DAI--YLKLd----G------IE------G-------------ESRIK----------G------F---ENQIKLIAYNH 59 
WP_254272566  94 QVDVP---------GddvRQSQVAIGEVVVVKAADTASVPLYQRFQNRApIGNPEVVFFGpTd---SGS-LQPVRRLRLR 160
WP_012703522  33 NVAMQvtnd-isnsEr--TSGKPHIGEFTVTKFVDTSTPSLNEYCCAGKaIPEVKITVGR-NaaesDGK-ILPFIVYTLN 107
WP_070531300  33 NVAMQvtnd-vsntEr--TSGKPHIGEFTVTKFVDGSTPSLNQYCCSGKsIPEVLLTIGR-NaaesSGK-IMPFITYTLT 107
AHY11620      32 NVAMQvtnd-vsntEr--TSGRAHVGEMSLTKFVDLSTPKLNEYCCSGKmIKEAVLTLCR-Nd---DGK-MLPLIVYTLD 103
WP_237381108  32 GLSMNafci-pgkeGr--TQGYVHHNDVSISKVMDNTSVKIQEKCCQADpIPEVTIKICR-E----KGSnLIPIITYTLH 103
WP_095977549  33 GITLPiasnaasndTr--SVGNVSHQDMKIVKMADKATPQLCAACCSGKvLTKATLTVRT-T----KDNaTTKVFTYELE 105
NP_251057     33 NVAMQvtnd-vsnsEr--TSGKPHVGEFTLTKFIDTSTPTLNEYCCAGKpIAEATITIGR-NaaegNGQ-IMPFIVYTLN 107
WP_093390716  32 AVAMQmtsd-vsnkEr--TSGKPNVQDFTLSKYMDKSSPVLNQACCEGRkIGDCKVTIGR-Ne---SGL-VMPMMVYTLK 103
NP_462046     32 NVAMQvnnd-vsltEr--TSGRAHVGEMSLTKFVDLATPVLNEYCCSGRlIRTAVLTLCR-Nd---DGK-MRSLIVYTLT 103
NP_463368     60 NPTKRe-------sGe--ARGT-YIGGLTLTKPVDLATPGLYEHYCNGKtVKEGVLTLCR-Rd---KGA-MLPFIIYTLT 124
WP_254272566 161 NAVVTGIFQTTlArSGlpETLETVSLRAQEVTVVDET---TGQETTltTqTTA 210
WP_012703522 108 NVVLSNVSVSG-GaGG--KPVETLSLNFTKIKWELTAqknDGSKEG--T-AAS 154
WP_070531300 108 NVIMSNVSVSG-GaGG--KPVETLSLNFTKIKWDLTTqkdDGSKEG--S-AAT 154
AHY11620     104 NVIISHLSVSG-GsGG--KPVETMSLNFTKIKWEITAqklGGQKEG--N-VSS 150
WP_237381108 104 DVLISSYSVSA-GaGG--NPMENLTLNYSTIKWEYKDqreTGLPQG--Q-MAA 150
WP_095977549 106 KVIVSSVSYSA-GtSG--EITETVSLNYTAITWNQGAv----------N-NSA 144
NP_251057    108 NVVLSNVSVSG-GaGG--KPVETLSLNFTKIKWELTAqkdDGTKEG--T-AAS 154
WP_093390716 104 DAMISSVSAAS-SgGD--KPAETLTLNFTAIQWDYTAqkpDSTKEG--N-AGG 150
NP_462046    104 NVLISQLSVSG-GaGG--KPVETMSLNFTKIEWQITAeksDGAQQE--S-RTS 150
NP_463368    125 NVRISRMSNHG-DaEG--SATETVDLVYSHIRWDIPAlasKSKTRRplH-RQA 173
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