Conserved Protein Domain Family
YdeI

?
COG3111: YdeI (This model is not part of the current CDD release)
Predicted periplasmic protein with OB-fold, involved in stress response, YdeI/OmdA family [General function prediction only]
Statistics
?
PSSM-Id: 512556
Aligned: 217 rows
Threshold Bit Score: 68.3214
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_090653835   1 MKKVsl-----aTILAlStMg------MAFfanAAdnaqtnapAAN-Apayevmpcgmvreynpmcngamcnrgypdgra 68 
WP_015156448   1 MKHG--------AFLS-LaL-------TAVm--GA--------IAI-P-------------------------------- 21 
WP_138094773   2 NKR---------ILIA-A-P-------VALf--WS--------IA--Apgap---------------------------- 23 
WP_199246023  68 LEDF--------DAVS-----------ITL---TN--------AAVnPqvisp--------------------------- 90 
WP_172358746   1 MKHLf-------LKLA-PvL-------VVGa--SL--------VSI---------------------------------- 21 
WP_223049113   1 MRYS--------TLLA-LtL-------IPL---TP--------VVYp--------------------------------- 20 
WP_215628265   1 MKKT--------GIIA-I-V-------LLLa--GS--------IALsAqgavsi-------------------------- 27 
WP_215628266   1 MSRYf------fVLIT-V-L-------LLL---TG------------A-------------------------------- 18 
WP_215628267  43 NERYiltdttgeILVK---IkddiwrgLLL-------------------------------------------------- 69 
WP_015143466   1 MNRK--------IFVA-SiA-------LASi--SA--------LTI---------------------------------- 20 
WP_090653835  69 nmrrgfknmpgnapymgmqmgQRG---------G--------FVA--NQ---------------SV--TRVADAGKW--E 110
WP_015156448  22 ------------------------------------------MLPsfAQ---------------AQsrTRIGDLQ----Q 40 
WP_138094773  24 -----------------tphqLSD---------Nap-----qAAAeqEA---------------HR--TTIARAKQM--E 53 
WP_199246023  91 ----------------nspptQSTis------pGmt---------ptTn--------------vSI--NGVQNIGGLpvR 123
WP_172358746  22 --------------------------------------------SpqVT---------------AQs-VPIGNL-----R 36 
WP_223049113  21 ----------------------------------------------pTAh--------------AQ--MRIRDLQ----Q 34 
WP_215628265  28 ---------------esarqmVNGpa------vGpapepprpMPGp-AAg--------------RI--PPVPPAPPA--H 67 
WP_215628266  19 ------------------------------------------YSGn-AQ---------------TT--ADVRDVSVM--P 36 
WP_215628267  70 ---------------------RSGeealvegelE--------FKGs-GAevnimyiqragsggdAG--VTVSQIKQL--P 115
WP_015143466  21 --------------------------------------------PafVG---------------AQt-TRIEELQ----Q 36 
WP_090653835 111 DDQMIVLEGNIIKRVGRKDYVFKDGSGELEIEISRRAWHGDIFSADDRVRLVANVEK---S--WGKTEVLAVHIEQI 182
WP_015156448  41 RARGTVISGEVV-SVVGNDFTLRDGSGEIIVDAGPRWWREINLKPGEEVSVRGEIGKksgE--FDAFSITRANGSTI 114
WP_138094773  54 DGASVKIQGVLEQKLGEDIYRLRDDSGTLNAVIPGTVLGDASIAATDQVIVTGALDK---K--QEPFRLRVSYLEKP 125
WP_199246023 124 EDVIVTIAGQVA-AVREDEFLLQDSTGQIWVEPQAGSWTGLNLNIGDQVTVVGDRDDl-eD--FDAVSITLTNAAVN 196
WP_172358746  37 RHQGITITGTVQ-SIVGNEFLLRDNTGEIIVDAGPRWYHQINLSPGERVTVVGEYDDy--D--FDAFRITRENGEVI 108
WP_223049113  35 TPPGITISGTVNQAI-GNYFVLDDSSGQIIVDAGPRWWQPISLTPGERVTVRGKVGRs-gE--LDAFSITRSDGTVI 107
WP_215628265  68 EKQWVTVQGTLEPLIQAEYYRLADATGDLLVKIKNDKWRGLMVKAGDTVLVSGNLSW---K--KEGLVLDAKFIQKG 139
WP_215628266  37 GDSWVFLRGTLEPVVQNERYILKDSTGEILVWIPGNQWQGLMLKPGDTVVIAGEVKH---K--SNGTEIETKYVESg 108
WP_215628267 116 EKSWVVVRGTIVRNIEKDNYLFRDSTGDMVVKIKEHVWRGLPRGTGDPVEIRGDIKW---EkkTIAAFVDAGYIGKI 189
WP_015143466  37 RSRSITVSGEVR-SVVGNDFVLDDGSGEIIVDAGPRWWPEIDIQPGEQVTVTGEMSKksgE--FNAFSITRADGSTI 110
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap