Conserved Protein Domain Family
YcbK

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COG3108: YcbK (This model is not part of the current CDD release)
Metallopeptidase MepK/YcbK, cleaves mDAP crosslinks in peptidoglycan, peptidase M15/DUF882 family [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 512554
Aligned: 601 rows
Threshold Bit Score: 93.1372
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_049764339   1 MPldpqglmITRRALVnalaaaamstsLPAF-AvtpewgKSpteitsdfwtQP-----RWVWL---KRAGtneeIkvvyw 71 
WP_013048487   1 -------------------------------------------------------------ML----SEH----F----- 6  
WP_015170673 365 realirlvqlwrklpsreatiqslfedvrrmeqarrdaieipkpqpmtlpsrpsvwtpdniqlyasiiPNg--sF----- 437
WP_015171480 229 syayadssgsfnrhikfalkyekdyiqylstwyvydgharveiggkvvypvpkptppttpsysgysfrlpgnvstfytdq 308
WP_199248489 389 LEdlk-rmdQARRGSPd---------aPPEPvVv----vRA----------RPqrwepRNIQIhasIIPNg--sF----- 437
WP_225906638 256 gfntwyvfdqharveqagrvvyprpqptpppppppppppppppppqytgrpfrlpgysstfytdqpiiPNg--nF----- 328
WP_244388294   1 M-----------------------------------------------------------SEK---LSAH----F----- 9  
WP_074008729   1 ------------------------------------------------------------MKI----G-Y----F----- 6  
WP_268608176 243 ikfaikyekdyierlstwyvydrhaqveqrgrvvypprpspspspspiytgtpirlpgnvstfytdqpiipggnF----- 317
WP_317034357 365 ealirlvqlwrrqegriptiqllfddlrrleraspsspeampvpvpapsparpsrwtpnniqldasivPNg--nF----- 437
WP_049764339  72 angqlipeAYQQLSWFLrDr-rFAELLSsdspiiakavssgrlaknqmtpwalMDPVVLDILYAYSAWLhvyGvTRPLMV 150
WP_013048487   7 --------SRTELACRCg-----CDRCD-------------------------IKPKLLSLLEKIRSLV---G--TPIFI 43 
WP_015170673 438 --------SWAEATHGGtrmppDQYTVD-------------------------AIVRIANLAQQARDRI---G--RPFHV 479
WP_015171480 309 piipggsftwgEATKDGtripdSVDIVD-------------------------SIIALARQLERARQQI---G--QPFLV 358
WP_199248489 438 --------TWAEATHGGtrmppDQDTVD-------------------------AIVRIARLAQQARDRI---G--RPFHV 479
WP_225906638 329 --------TWGEATKNAtripaTKAIAD-------------------------NILALARELQRVRNQI---G--RPFQV 370
WP_244388294  10 --------TVRECKC---Pccg---llN-------------------------VSPTLLKLAEKIRTQL-----KAPMHV 45 
WP_074008729   7 --------DTKELASKDgqh-spFGEQQ-------------------------VRSELLFLLNRIRTAW---G--RQIIV 47 
WP_268608176 318 --------TWGEATKDGtripdTVTIVN-------------------------NIIALARQMQRARNEL---G--RPFLV 359
WP_317034357 438 --------TWSEATRGGarmppNQATVD-------------------------AIVRIAALAQQARDRI---G--RPFLI 479
WP_049764339 151 TSGFRHFISNELTeGAALASWHPKAGAVDFYVPGVP-VE----QTARFGQW-------LAGGGVGLYL-KKNFTHVDR-- 215
WP_013048487  44 NSGYRCPTHNKRI-GGVPNSWHTQGVAADIRQAKYS-NNvfhsKVLRAYKDgk----lSELGGLGLY---NGRIHVDVhk 114
WP_015170673 480 TSWYRPPEINARV-GGASESRHIVGDAIDFYCDGLT-GD----QIYWALDP-------WWpGGLGRYIqYPYLGHLDAr- 545
WP_015171480 359 NSWYRPPAINAAV-GGVSNSQHLYGKAVDLQVNGYS-GR----RLANAVML-------WWpGGVGIYSnLPDVLHLDI-- 423
WP_199248489 480 TSWYRPPEVNRSA-GGASQSRHIVGDAIDFYCDGLT-GD----QLYWLLDP-------WWpGGLGRYSqFPYLSHIDAr- 545
WP_225906638 371 NSWYRPPDVNSAV-GGATNSQHLYGKAVDVQVQGLS-GR----QVANAVML-------SWnGGIGIYSnMPNVIHLDI-- 435
WP_244388294  46 HSVCRCVRHNREV-GGRPKSRHLLGHAMDFHVPNLS-PQ----ATYNAIIKmwaagdlPELGGVFVYDw--G-VHVDIdh 116
WP_074008729  48 NSAYRSPEHNRAV-GGVENSYHVQGLAADIRPENLEdLP----ELQDLCLEl------NSDGGVGLY---DSFVHVDAr- 112
WP_268608176 360 NSWYRPPAINDAV-GGVPNSQHLFGRAADVQVIGLS-GR----RVANAILL-------WWpGGIGIYSnLPDVVHLDI-- 424
WP_317034357 480 TSWYRPAEINRRV-GGASQSRHIVGDAIDFYCVGLT-GN----QVYWALDP-------WWpGGLGRYRqFPALVHLDAr- 545
WP_049764339 216 ---GRVRSWQS 223
WP_013048487 115 pkdGHLRQWRG 125
WP_015170673 546 ---SYRARWTN 553
WP_015171480 424 ---GPRRVWGF 431
WP_199248489 546 ---DYRVRWVH 553
WP_225906638 436 ---GPKRTWGF 443
WP_244388294 117 addGHLRRGDY 127
WP_074008729 113 ---GFKARWDN 120
WP_268608176 425 ---GPKRTWGF 432
WP_317034357 546 ---GFKARWMH 553
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