Conserved Protein Domain Family
NdpA

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COG3081: NdpA 
dsDNA-binding nucleoid-associated protein YejK/NdpA [Replication, recombination and repair]
Statistics
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PSSM-Id: 442315
Aligned: 74 rows
Threshold Bit Score: 243.626
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_025265160  18 FIMALRFFITHQIAKa---SNDPAAKLNCSVLEGNADEgalapYYQQAASQLKGILMQRSG-KRYGVFsd---eQ---PT 87 
WP_012070241   1 --MSISNLIVHEIQKh---EGERKAILIARPNENPVDG-----QAEALSAQVTNLFNRSG--MNTGRFvnpqgsEe-gAQ 67 
WP_012584681   4 VEHVVTHLILHALVR----EPGAPSRLVLREAPCALDA-----ATLRLAERLCAQYESRSA-KGFGRFee---dEe-rFP 69 
WP_012621970   1 --MDIKHIIYHILNK----EVQGMPQIIPSPNEIPTTE-----THVNFLTKLTESYASRAG-KGFGQFds---dEd-sYP 64 
WP_012368752   2 ASLQVLNAIAVRITPp--eDEQKDWSYTLGALWPTDQQ-----EVITFTTKVDARFHKSS--KSHAKFqk---pYp-gSS 68 
WP_015434359   4 VQHTITHLVVHKLHR----SGESPASAELREAACRVDD-----AAVRMVERLCSHFADRSS-KGYGRFed---dEe-aFP 69 
WP_013855673   1 MASALHNLVISSIRR----GERNQALSTTRENENRIEG-----LTQTTKDKLTSLFNTTG--MRVGRFdt---ePe-rPF 65 
WP_082018291  22 MSFTLRHAIVHELLKeqymDIDDKKKYNLRTKELDCNSp----IVIKLSQELIQKYGKKYNtVTYSSFdt---dKirrGK 94 
WP_070529336   4 SEHTLRNLIVHHLVK----APHGDATMVLRDAEIAPSP-----AAQQLVDQLVDRYSERSG-KGYGRFed---dEd-gFP 69 
WP_125972706   2 TTNAISHLISHQINK----EAHGPVSLRLSNKEITHTP-----AAQRLIDQLCKLYTQKLG-KGFGSFee---dQe-aFP 67 
WP_025265160  88 VRGLIKDWQRDG----MSFQSFSKR-LTEHLSSTLDSSEFEM--EGYLAYFYETLA----------DHDKLYVFHLRHKE 150
WP_012070241  68 LPALLFKHFKNDt--fVDFAGFTKE-CAAEYLKYLEPVEEAE--GGLLWFNHYELH----------DTHFLYIVMLKRKK 132
WP_012584681  70 LARWLREHLVDEt---LDFTALSCQ-LAERVQAIADEEELEE--GGHLVLARIREG----------EGDSLWVALLGSSD 133
WP_012621970  65 MPRIVREYLVNQ-----DFYAATER-MMNTLSTKIQEQPLAT--GGKVFIVHFAEN----------QNDYLLIAILSEKM 126
WP_012368752  69 FPSKLSKFLEKE----TSFEVFVHDfIQKKLITSARQSRASN--GAILVFTHYQLQhekedgsvhkDFERLLVLMLKNTD 142
WP_015434359  70 LPRLVREHVVDKg---LDFAALSKR-MMDVMRLCADEEGADI--SGYVVVARIMEG----------SSDCLWVAVVGEAV 133
WP_013855673  66 FARTLDDHLDKEtfdiANFRNFGAS-LGTALASELSRGQAQNakDGFLLTYYYSVElngddeeepdAQRYLGLVFLHRIN 144
WP_082018291  95 FPDAFQKYHSLKrktkQAFIDLSVL-VMNELATKASKIKSSS--GGYILFLDYFYD----------KNSYLVIAMIKQKD 161
WP_070529336  70 VQRLLRQHVVDGa---VDFVTLSKL-LMQQLLARIEAEPLAA--GGYVVIARLEHA----------GSDYLFIALASEAI 133
WP_125972706  68 MQGLIRQLMEG-----ADFLSSSQQ-MMQHLLLRLEQEPLAS--GGHVLIARIKGN----------GTDFILFTILSEIM 129
WP_025265160 151 SVSVGADMSLTETRYIDFSNTGFGVCINLTDWQQD-----SDSKYITFSFGRGDKPLQNHMAAGIGFTDTLNTQAETEEF 225
WP_012070241 133 GIGLGADLSLSQIEQIEMEKLHMSLRINLTAWQAG-----DEGRYISFRFGRAPKFESEYFTQFIGCDEPKVAAKETRKL 207
WP_012584681 134 GVAIGGDLAPLDCTHVDFSALHAAGRVDLAGWRRGd------ERYLGFLRGR--GKGGAWFKRVLGCSDVMVALQETKKL 205
WP_012621970 127 AFSTTD-WQLVEEEVLALEHLKFAGRINLTAWQAGe------QRYISFLKGQ--GDIAQYFKLFLGCNDVLIAQQETKKL 197
WP_012368752 143 ALRFKENLQLNPVDVIDLDKFLQGARVDITRFMSEev-edEDKNNLCFIRGT--GDVRKYFTESIGAEDIISNKTSSEQC 219
WP_015434359 134 GSAVTGAFDVIDCLHLDFSALPAAGRIDLSGWQRGd------ERYISFLKGR--GDVAPWFKRFLGCSDIVIALKETKKL 205
WP_013855673 145 GVDIDEELDLKEIDQINLDSLNLGARINISSFINAer--dGTERPISFKIGR-GSDVRKFFQEFIGCTEPSDSKTDSANL 221
WP_082018291 162 ALTITDNLNLEELLSIDLSKIHQATRINCTHYSQAlasknDDNFYLSFVSSATDGNTSSYFITALGCQKNTTASKMTKNI 241
WP_070529336 134 GTAIGDGLSIVDSPYLDLTALRVAGRIDLSAWLRGv------ERCISFLKGR--GDVANYFKLFLGCNDVVIALKETQKL 205
WP_125972706 130 GTMLDEELNVADSIYLDTANLKVAGKIDLHAWQNGa------ERYISFLRGR--GDVAAYFKSFLGCNDIVVALKETQKL 201
WP_025265160 226 LSIVDQYSQ--TLPEEQRFEYKAKVVDYCMEH-DLRGEPVVFDELADHLAAet-------ksHPAE-AFSHYIIekkket 294
WP_012070241 208 VDLTAAFCQseGFPSKQANEFKKVVSEHCQAK-AQDREPLAIKEIASQVESrf-------svEQAN-KFLEIAD------ 272
WP_012584681 206 VATLDRFVDteRLAPATRDTVLERAHDYLDTL-GEAGAPVVFEELAREVFP-----------EQPE-RLDALLR------ 266
WP_012621970 198 VERLEEFANeqELDVEQKTEFFERAQEHLHEI-SNNEEPFSAETFANRVWS-----------ENPQ-ELKDKLA------ 258
WP_012368752 220 IKALEQFSHqkEFGRALREKIESKIQELFNN--CKRGQSITLEKIQTQIDAiipv----dlaEHKN-TFVDFVN------ 286
WP_015434359 206 VQRLSDFAEtqRLDPPARDAMLERAHGYLDEL-GESGSPLAIDEVARKIWP-----------EQPE-RLDAVLT------ 266
WP_013855673 222 IVALEDVCErlGFTSEETKAATDKLQSYCNAAiLHSGAQAEIANLAGFVFE-----------DEEQkKLFVQVA------ 284
WP_082018291 242 IDVSEAFFEndPEIKKYTNDFKDELIKYLTYC-CDKKQMATLEQVISKARLildlsgfqnsnQKAD-ELLEILN------ 313
WP_070529336 206 VQGLTQFAEreQLPAPQRDALFERAHGMLDEA-GDAGAPLSLDQLVEQAWP-----------DAPG-LLREALN------ 266
WP_125972706 202 VHGLSQFAEeqHLPPAERDQLFERAHEYLDEL-GNASCPVTLEQVAEQIWP-----------DAPM-QLQNVLD------ 262
WP_025265160 295 rqqqrsnsglspeqlaaqgapmiEVAEAVKAELIPDRKQLRGFIRYSGKNKDLSISFSANLMGE-----GIEFDAPNKR- 368
WP_012070241 273 -----------------------SDSFKMEKEIFVEKAALKKLTRLSGSSRALTISFDSELLAE-----SIVFDADSGT- 323
WP_012584681 267 -----------------------AEETKIAPGFVPNRRAIRPLVRFSASAENWKLEFERSGLHSg----AVHYDRATDT- 318
WP_012621970 259 -----------------------DAENGVADGFIPDKRSIKKLSTFTGKTRHWRLSFDRTAVLSg----DIELN--SGK- 308
WP_012368752 287 -----------------------ENGFEVNEEFEVSASDKRQYEWLDFETNIAKMSVRKHQIGLpgsdrPIIFDTETNEv 343
WP_015434359 267 -----------------------AGEAPLASGFVPDRRAIRPLVRFRAAGEQWKLEFDRSSLHSg----AVHYDRASDT- 318
WP_013855673 285 -----------------------QDVYQLSECIGLDKAEINKFDDIIVKTDDYRVTFKDSAIINq----SVVWDPEEES- 336
WP_082018291 314 -----------------------SESVNISAAFNVNKDQLNKMLKVKLENDDYTLNFARKLLGTte-ahKIYFDEKKGKf 369
WP_070529336 267 -----------------------DDESRIASDFVPDRRAIRPLTHFKAKADHWKIEFDRNSLRSg----QVIYDRDNGT- 318
WP_125972706 263 -----------------------HQDLALTDGFVPDRRAIKPLRTFKTKAPHWKLEFDRSSLRSg----AVHYNPENDT- 314
WP_025265160 369 ----LIVNAIPESLLKQLKGKS 386
WP_012070241 324 ----LTIKDLPKSLLKQLQAMS 341
WP_012584681 319 ----LVLSGVPDYLKRMLEEDA 336
WP_012621970 309 ----IIINNPPESLFGAFE--- 323
WP_012368752 344 ---kLTQKINDPIIIARLKELA 362
WP_015434359 319 ----LVLSGLPEYLKKMLQDE- 335
WP_013855673 337 ----IKLSNLPKDIVHKMKRRF 354
WP_082018291 370 gkliFDMDEISSNKVKEILKi- 390
WP_070529336 319 ----LILTEIPEGLRRALLGDR 336
WP_125972706 315 ----LVLSNIPEEMRKELLAET 332
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