Conserved Protein Domain Family
VirB10

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COG2948: VirB10 (This model is not part of the current CDD release)
Type IV secretion/DNA transfer system protein VirB10/TraF [Intracellular trafficking, secretion, and vesicular transport]
Type IV secretion/DNA transfer system protein VirB10/TraF; is part of the Pathway/BioSystem: Type IV secretion system
Statistics
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PSSM-Id: 512540
Aligned: 396 rows
Threshold Bit Score: 144.387
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_125216831   1 MDnkqnln-------nqnqelEQPeiekgISPVAALPAknIVVIVVFiAVIIFMIyMLFFSssdenkn-------fdrpk 66 
WP_013581510   1 ------------mmepnetksvatvpeqpeaktplrksmpvvvalvvivgligianvsslmsgnkkvapqsaltmspttp 68 
WP_114211189   1 MDtv----------------pQQP-----VAKPPIQKTlpIVLVLLGgVLLIGIStVFNLIaghkkeaakstmqtkpsta 59 
WP_128699317  65 nspedkdvgvlvgsvdtktyvsriekqyydiasrqdsseahlgqlekdIAIL---------------------------- 116
WP_001045839   1 MNk-------------------------------------WLKGAIVfVGGFATIiTISLIyh----------------- 26 
WP_135078589  85 pmkvkkappkpdpvrvwleqrAKQr------------------------------------------------------- 109
WP_087205600  64 IGeqddtldtagrnvaaridaAQDssaqnsdsv----------------------------------------------- 96 
UPT75002       1 MTc----------------------------------------------------------------------------- 3  
WP_040059398  62 eakpeqepapapapdpqpepvSEP-------------------------------------------------------- 85 
WP_011138980   1 --------------------------------------------------------------------mkpvlkailiss 12 
WP_125216831  67 lEQKIeavkppe---------------------eietplpSITSTVieepkitmpeitapevaPPpppp--------pii 117
WP_013581510  69 nAQQVssfetqqqnqakhdaeelqrqqalakamqelqqeqSVPGPEsa-------------gtPPmtaaq-----reqiy 130
WP_114211189  60 dPQQVsgfekqqeqiakndqd---nlqmqkalaalraqdqGAPGPEad-------------psLPmtpaq-----saaiy 118
WP_128699317     --------------------------------------------------------------------------------    
WP_001045839  27 --------------------------------------------------------------qKPkapl----------- 33 
WP_135078589     --------------------------------------------------------------------------------    
WP_087205600  97 -------------------------------------------------------aasenqstGPvlettnfddpllail 121
UPT75002         --------------------------------------------------------------------------------    
WP_040059398     --------------------------------------------------------------------------------    
WP_011138980  13 svvlllmgsfflvawmdskedssdsegfidetkfpltgylykespkeekitieakkeepkdtlaelstlketiskkttay 92 
WP_125216831 118 PQ---P---------APaiettasnfSFAPSKSAgntt----------nndQRKR-------------SP-MVV-----V 156
WP_013581510 131 GSs--Pn--------APqqtsnmse-------------------aqaeakqKRLAvqkqa---qdaqnSDtVAId---fS 175
WP_114211189 119 GAs--Pn--------APrqtsgqae-------------------leaqarqQAAErakkr---edalnSDtVAIdfairE 166
WP_128699317 117 ---------------------------------------------------RKNQse----------vSK-IVMd----- 129
WP_001045839  34 --nnqPsllnddevkYPlqdy-tftqNPQPTNTEsskd----------atiKALQeq---------lkAA-LKAl----N 86 
WP_135078589 110 -----Psfndtd---------------------------------nhfvelASLKg------------SA---------- 129
WP_087205600 122 SDesgP---------APq--------QNDPAASVrqplevspefeamlerqRREDewraer-arqaavAP-LTQsrytv- 181
UPT75002       4 ---------------FP----------------------------------KLLA-------------AA-LFA------ 14 
WP_040059398  86 -----P---------APdpyrta----------------------leaawqHRVSlss-------nwgTPa-------wQ 115
WP_011138980  93 tmdifPrdd----------------------------------------geARLKeqkrqsmlaqrlgAP-IQI------ 125
WP_125216831 157 G-----GSESSEAR-------------------Q-AAD------KERldslvINSNFTp-----KR---TT------AEQ 191
WP_013581510 176 H-----EGASPLTAvkaaglqat--dkesgeeiA-GKPq----sKEA-----ASTa--------PA---KSd----pMSS 223
WP_114211189 167 T-----PEAASAVSvhdenkagedkgsgppaqaA-GDSdaekdiAEE-----QGPRLGd-----KK---DKn----pMAA 223
WP_128699317 130 -----lDKRVTIALsesmnl-------gksgsqEn---------QEG-----SGEGILgn--slSGitpVKpamrleMAK 181
WP_001045839  87 SkemnhSKEEtfknp-----------------pidlKAntn-ppKKDf----SSKQWDllaariTPf--KQgp---kNYE 139
WP_135078589 130 ------GGLS--------------------------APsl---sSEKglktpAPKSYQ-------------------AEK 155
WP_087205600 182 -----------------------------aelrErQREi-----RQRr----QDEDATr-----SR---ASq----dAQA 211
UPT75002      15 -----------------------------------AAPv----sAQEt---vVSRAFRdk---kEN---AGpp--akFMG 44 
WP_040059398 116 Sde--mSGFSrnnalpg------------msapaamDPldl-ptNEN-----DKADYQ-------------------GPR 156
WP_011138980 126 ---------------------------------N--PPinq-ftPEQ-----KEIDYG-----------ANrfsnydkqd 153
WP_125216831 192 VVATRIGDLT----------------------ATIAQGKIIDAILESA----INT-DF----PGYVRAIVSRDVY-AEQG 239
WP_013581510 224 YSFDQYDGEL----------------------YRIFEGTVLEGVVTNH----IDG-GL----SGPILVMLTTDYY-SHDH 271
WP_114211189 224 YDFDAYGGQL----------------------YRIFEGTVLEGVVTNH----TDG-GM----AGPVLIMLTTDYY-SHDH 271
WP_128699317 182 VNEINEEANAekk-----------------ryVYLPLGSFVKGTLLTGvyapVNV-NN----PLPVLISVDEAFYgPNNT 239
WP_001045839 140 ENLIFPMDNPkgidgftnlkekdiatnenkllRTITADKMIPAFLITP----ISS-QI----AGKVIAQVESDIF-AHMG 209
WP_135078589 156 VESGEPISNS----------------------RIFTADRYMAGFLEGG----INS-QLsskeGGDIVIQISRHVF-GYGT 207
WP_087205600 212 AQDQSIVPTG----------------------HVLAAGTVISATLIDN----LDS-EL----PGLVRAWVSNDVWdSDTM 260
UPT75002      45 VTQKTPTKTN----------------------YFLPTGFTFPVRLENA----VYSyNA----ETPAIGIVERDVV---YL 91 
WP_040059398 157 RTSTLPVDNS----------------------RIITADRYITVILETG----INS-QVggdaTGTVIVQSARDVY-GYHG 208
WP_011138980 154 -----------------------lasnehrllRTITADRMMPAILITP----ITS-DL----PGQVTALIEDDIF-AAMG 200
WP_125216831 240 KKILVPKGSRLVGVYAAEIKSTQKRVMIAWNRLIR---PDGIDIML--DS-P--SIDQIGRAGTEGVVDTKFFEIFTNAL 311
WP_013581510 272 QQLLMPQGTRLIGSVQAVGNAQQRKMFVTFHRAVC---PDGFSLDF--DKyV--GLDQIGTTGLATRVDHGYLMAFGAAA 344
WP_114211189 272 RQLLLPQGTRLIGSVQTVGSQQQHKLAVVFHRAVC---PDGFSIDL--DKyP--GLDPLGTTGLATKVDHGYAMTFAAAA 344
WP_128699317 240 RVPL--KGAFAIGKAIGDVVSKRAIIQIVGFSIVL---PGGNTFEH--EGnLgyLTDETGRLGIPGELIYNTGKQLSLSF 312
WP_001045839 210 KAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIIT---PHGINIML--TNaK--GADIKGYNGLVGELIERNFQRYGVPL 282
WP_135078589 208 RNILIPKGSRLLCNYDSPDSLNATRVAITCFRILLggdQEGKRVEI--AQlEatTRDAQGRAGTTGTVDNHFDEQYGTAL 285
WP_087205600 261 RTVVIPRGSQLLGEYSSTSGAGQRRLELTWTRVRL---PDGRTVDL--DSaL--GLDESGRVGIEGQRRNGFLTAVFQTA 333
UPT75002      92 RRVTISAGTRVIGTVA--VIKSHDRVLVNFHTLVF---ETGDEVKF--TGm---ALSLDGAAGLKGKVETHKDAAVANTV 161
WP_040059398 209 RNVLIPKGSRLICNYDPPKDMGSSRLSISCERILI----AGHRAEIrqLAsP--IGDIQGRQGATGDVERRFWERYGTAF 282
WP_011138980 201 RANLVPKGSRAIGIYGSNNKLGENRLQIVWTRIIT---PQGVNILL--TQaQ--AADVTGMSGALGELDNKYWDRYGLAL 273
WP_125216831 312 LMSIVNYAIAYQS-E-TfqnkqaakdpnisgipSGSttttngidpatgkpittttepyK--PPSiKALDEGSKTMQD-AA 386
WP_013581510 345 AIGGLGGLAQIGN-N-Asi--------------------------------------lT--PSA-QIREGISEQSAA-EG 380
WP_114211189 345 AVGGLGGLAQIGN-A-Gss--------------------------------------lT--TSS-QIRNGLSSQTSA-EG 380
WP_128699317 313 LSGFLAGGAEALSqA-Qttsvvg-----aygqtSQNv---------------------TgnTGNyAMFSGLANSAQG-MA 364
WP_001045839 283 LLSTLTNGLLIGI-T-Salnnr------gnkegATNffg--------------------dyLLM-QLMRQSGMGINQ-VV 332
WP_135078589 286 GLAGISALVRGAS-A-Ylttn--------ssgeTTTt--------------------gE--IAD-SASQELGTRFGE-IS 331
WP_087205600 334 LLNMAGSIGNSSS-Ss-----------------DAA----------------------T--LAQ-AAQMAMGQGVSQ-VG 369
UPT75002     162 LRSFVNGTQAAL--DmSg-------------------------------------------VSP--VASSATQGITQeAV 194
WP_040059398 283 MLTGISTAVRYAA-A-Ttk-------------sEESdge-----------------vaTa-AAE-KAAEELSTRFGE-IS 327
WP_011138980 274 SLSTVANAILLTV-A-Nq---------------TQKf--------------------pNdhQTT-TLLDKSGNDIST-IM 314
WP_125216831 387 KKIVDGLLDERPTITIDQGTRIKVFVRKDLVFpN--------KY-SG 424
WP_013581510 381 EQVLNHFLNRLPVITLKEGSRARVYIGRDILI-P--------SY-AE 417
WP_114211189 381 EQILDHFLNRLPIITLKEGSRARVYIGKDILI-P--------SY-AN 417
WP_128699317 365 SYYQKQLEAMIPAIKIEAGTKVTLVIQKGVEIeGlkasvddfDYvD- 410
WP_001045839 333 NQILRDKSKIAPIVVIREGSRVFISPNTDIFFpI--------PR-EN 370
WP_135078589 332 ASILEKTTSIVPTITVSQGKRVFIKPRKDWYLkE--------VNs-- 368
WP_087205600 370 TQYINDRLTRGTVFRVKAGERINVQITRDFLFpD--------AY-QR 407
UPT75002     195 KELDVQRQEVTQSITIEAETGLRVYIPQRFEF--------------- 226
WP_040059398 328 ASVLEETLSLQPIITIPQGTRLQIRPATDWYIaN--------VE--- 363
WP_011138980 315 NNIIKEQTKIAPTITISAGSRIFINPTVDIWVpI--------PK-DN 352
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