4ATN


Conserved Protein Domain Family
RlmM

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COG2933: RlmM 
23S rRNA C2498 (ribose-2'-O)-methylase RlmM [Translation, ribosomal structure and biogenesis]
23S rRNA C2498 (ribose-2'-O)-methylase RlmM is part of the Pathway/BioSystem: 23S rRNA modification
Statistics
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PSSM-Id: 442177
Aligned: 103 rows
Threshold Bit Score: 261.325
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4ATN_A         1 MN---------KVVLLCRPGFEKECAAEITDKAGQ-REIFGFARVKENAGYVIYECYqPDDGDKLIRELPFSSLIFARQW 70 
WP_011555311   1 MPartlaarpgRWLWTCRAGFEAHLFEELEWAGAE-PRLLGEALVES-------------------DAVSGPPPAFARAG 60 
WP_040103876  11 LSs-------sRFVCTANHGFAPYAQEELRRLFGS-VKST---MLLP--GEIFLA-TlPAGEIETVRTITGQPPMFLRHL 76 
WP_081465952  48 TPvqtlppspgRWLWTCRAGFEPHLYEELAWAGAA-PRLLGEALVES-------------------NGAPGLAPAFARQG 107
WP_015254616   1 MT---------RFICTANHGFAPYAMEELRRLLGQ-ASFR---MVVP--GEVFEL-SaENGRDEILAQIRQAEPIFLRHI 64 
WP_014395052   1 MPaqtlaaqpgRWLWTCREGFESHLFEELTWAGAG-PRLLGPALLES-------------------EQRPEVPPAFGRAV 60 
WP_047861988   1 MPavtlpsqpgRWLWTCRAGFEPHLFEELAWAGAS-PRMLGEVLVES-------------------EKRPSEPPVFARTG 60 
WP_087455096   1 MTs-------sRFIGSANFGFAQYAQEEIRRLFPG-VKFR---YLEA--GEVFLI-DaPAPAEEVTAALLEHEPIFLRHI 66 
WP_123040646   1 MTs-------vTFIGTANPGFAPYAMEELRRRFPG-SSVSG------LSGETFRFSPgVSDTEEWLKEIRRDEPVFLRHL 66 
WP_129889291   1 MSie------nMIIVTAHAEFAQAAVSELKQLDKRlTSIE---ELAP--GIVLCG---APDIVTLINKASREQLIFTRHI 66 
4ATN_A        71 FVVGELLQH-LPPEDRIT-PIVGMLQg-----VVEKGGELRVEVADTNESKEL---LKFCRKFTVPLRAAL-RDAGVLAN 139
WP_011555311  61 YQVAATLTA-TNPEAIAD-AAARAVLa----lPGRTPWAVQAFTPDTPRGNAL---APVAEALESAVSARL-PAERRIED 130
WP_040103876  77 FPVHFQEEG-TDLVQVQE-RLVAFIRnr----reLIDQRVSLQVRKGTNSS-W---TESAGALRLALSEQL-SDLPMELV 145
WP_081465952 108 MRVLASSPW-PSPGFSAD-ALARQVAa----qPPAAPLVLQAFTPDTPRGNTL---APQADALADAVRSLL-PTGRLLED 177
WP_015254616  65 QPVDFARPI-AGGPDDLA-ALADIVRgtp---drFAGKRTAVHIRRREGSP-F---AYPAAEAKAAADAAL-REAGAEPA 134
WP_014395052  61 ERVVATWAPpGGAQVPVE-DLVAAMSg----lPSRVPWLVRAYTPDSAKGNTQ---AGRAEALEAAVRSAL-PAGRVLED 131
WP_047861988  61 IRVQASLPAdQTPEQLAE-SISARVLe----aVPTSALVLQAFTPDSPAGNRM---ADEADALLEAVRARL-PPERLLEE 131
WP_087455096  67 QPVQHELPL-GKTADDLM-RLIQFMQelr---pfAAGEKVAVQARKVKEVK-F---AYTPFGVKDALDPILeQEQSVEPV 137
WP_123040646  67 FPLDAEVPL-TDDPGSTAdAIVAYARtla---dkVNGRKVAVQVRKAVNSP-F---PFTSAEARDIAAGVV-REAGGEPV 137
WP_129889291  67 APVQATVNL-SNTQRDIG-MIATAIAdlptfaLLERGTHFSVQSRLVQTDRSLgerAYSGGQLNKDLAEAIaDETGALES 144
4ATN_A       140 Y---ETPKRPVVHVFFIAPGXCYTGYSYSN-NNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFipadewDERLANGMWA 215
WP_011555311 131 AqraREAGALLVSLCVAPDEVTVVGAVHAReAVSLAAGGRRRMRRAGDAPSRAAMKLEEALDGL------AFEPGRGDVC 204
WP_040103876 146 Vq-----GADVIVSVFADTDTWYAGVSHPQdNLSDWSGGAVRFQKEDGQISRAKFKLLEAEATF------GIDFSAFHQG 214
WP_081465952 178 AaraREEGARLVSLCLAP-GLAVLGEVLAReALSLAPGGRRRMRREGDAPSRAAMKLEEALDGL------PFEPGRGEVC 250
WP_015254616 135 Qq-----SPDLILSVFATDSELLIGWGTADeMLSDWPGGAIRFRREDGQISRAKFKLLEAERTF------GLRLDAHERA 203
WP_014395052 132 DgraREAGALLVGLCVAPDGVLMLGAVSAReALSLAPGGRRRMKRAGESPSRAAMKLEEALDGL------AHEPGRGDVC 205
WP_047861988 132 TwraREAGATLVELCVAP-GVVLVGSVPAReALSLSPGGRQRMRRSADSPSRAAMKLEEALVNL------PFEPGRGEVC 204
WP_087455096 138 Vr-----GADKIISVYLTDGTCYFGISTPYeNLSDWNGGMVRYRKEEEQVSRAKFKLLEAEERF------HLDLSQFRSA 206
WP_123040646 138 Lq-----DADWIVSLYASPKTLLFGCSEPRnNLSDWPGGAIRFRREEGLLSRAAFKLLEAERAF------RLPLDRFNNA 206
WP_129889291 145 Ik-----KPQIVVSILCTMYKGYLGISPVEeNRSNWPGGSRHYAQTAEQISRAEFKLLEALEVF------ELALPHQGRA 213
4ATN_A       216 VDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPT-----RsNISWMVCDMVEKPAKVAALMA 290
WP_011555311 205 VDLGAAPGGWTQRLVSRGAKVVAVDPARLMPELTGNPRVKHVQESAFAYAPD-----E-PADWLFCDMAWRPLEVAQLLA 278
WP_040103876 215 LDIGAAPGGWTSFLLERGLKVTAVDPAKMEPSLMKYANLTFLRKNASEVKFKe----N-SFDLLVCDMSWSPKQMARLVT 289
WP_081465952 251 VDLGAAPGGWTQRLVARGARVIAVDPAKLMPELASHPRVRHIQESAFAFAPE-----E-PADWLFCDMAWRPLEVAQLLA 324
WP_015254616 204 LDIGAAPGGWTSLLLERGLDVTAIDPADLHPSLVGHPRVTWLKRNAGEVSFPp----G-TFDLLVCDMSWDPATMAKLVL 278
WP_014395052 206 VDLGAAPGGWTQRLVARGARVVAVDPAKLMPELAKNPRVQHVQESAFAYAPE-----E-SADWLFCDMAWRPLEVAQLLA 279
WP_047861988 205 VDLGAAPGGWTQRLVARGARVIAVDPAKLMPELARQPRVEHIQESAFAYAPE-----E-PADWLFCDMAWRPIEVAQLLA 278
WP_087455096 207 LDIGAAPGGWTSLLLERDLQVTAVDPGALHPSLSGHPNLTILQKNAGDVVFAe----G-AFDLLVCDMSWSPKQMSKLVA 281
WP_123040646 207 LDLGAAPGGWSSVLLDRGLKVTAVDPAEMDPSLKGHPRLHHLKKNAAELSFPp----G-TFDLLVCDMSWDPHRTCRLVS 281
WP_129889291 214 LDLGAAPGGWTRLLLDAGLHVIAVDPAKLDPRLVRRRGLEHYQGYAENYLEEairrhY-KFDIIVNDMRMDAREAARLLA 292
4ATN_A       291 QWLVN-GWCRETIFNLKLPMK----KRYEEVSHNLAYIQAQldehGINAQIQARQLYHDREEVTVHVRRIWA 357
WP_011555311 279 KWGRR-GWAQHLVANIKLPMK----DKNPILLRVRHTLGQE----GGWEGLTVRQLYHDRDEVTVTAHKMK- 340
WP_040103876 290 DLLYSlRSGGTAIVTVKLMHK----KPLALIHDVIASFEESg-----MQIQRAKQLFHNRDEITLYMIKYGK 352
WP_081465952 325 KWGRR-GWASYLVANIKLPMK----DKNPLLVRVRHILAEE----GEWKGLTVRQLYHDRDEVTVTAHRR-- 385
WP_015254616 279 RLSPClKPGAEAVVTVKLLHR----KPMQTIRNVTEQLAQA------FDIRRAKQLFHNRDEITLYLIYRGA 340
WP_014395052 280 KWGRR-RWARNLVANIKLPMK----DKNPLLLRVRQTLVED----GGWEGLTVRQLYHDRDEVTVTAHRMR- 341
WP_047861988 279 KWGRR-GWASHLVANIKLPMK----DKNPILVRVRHILTQE----GGWQGLTMRQLYHDRDEVTVTAHKVT- 340
WP_087455096 282 ELLPAlETGGVAVITVKLMHK----KPFQTVRETLENLEPQ------LVLLKAKQLFHNREELTLYLMKEEE 343
WP_123040646 282 ALSPAlSAGGSGIITLKLMYR----KPFQTLRELTEAYSEH------FDVRRVKQLFHNREEVTMWVRRKP- 342
WP_129889291 293 KAAQClRADGIVVSVLKLPHAtaeiNPQATLREALSILRKH------YGILQARQLFHNRQEVTIVAAQPLT 358
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