1FXX


Conserved Protein Domain Family
SbcB

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COG2925: SbcB 
Exonuclease I (degrades ssDNA) [Replication, recombination and repair]
Statistics
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PSSM-Id: 442169
Aligned: 170 rows
Threshold Bit Score: 600.577
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FXX_A         8 QSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE-ARAKGENEAAFAA 86 
WP_011930220   1 MKTFYWYDYETFGISPKIDRISQFAGIRTDENFNILDEQ-MFYCKPTNDCLLSPETCLITGISPQL-CEQKGMIEHKFIK 78 
WP_011738280   1 MKTFYWYDYETFGISPKIDRISQFAGIRTDENFNIIDEQ-MFYCKPTNDCLPSPEACFITGISPQL-CEQKGMIEHEFIK 78 
WP_012823943   1 -MSFLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLVTGILPQTlASSGGRPEAEFAA 79 
WP_013255611   2 ARSIYWYDLETFGTHPRLDRIAQFAGLRTDEALNELGEPLVLYCKITQDYVPDPKACLITGITPEE-TLRKGLSERRFIE 80 
WP_013388911   2 KKTYLWYDYETFGADPKRDRISQFAGVRTDMDFKVVDE-MVYYCKVAEDYLPNPEASIITGITPKE-SNEKGITENELAE 79 
WP_041193053   5 NSTFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPRACLITKITPQF-CLNNGIPEYKFAS 83 
WP_039327669   2 AQTFFFYDLETSGLNPRQDRIMQFAGQRTDMNLEPIGEPYNLLVTLNDDTLPSPDALMVTGITPQK-TVEEGYSEAQFAR 80 
WP_053820565   1 MKTFYWYDYETFGLSPKVQRIAQFAGIRTDENLNVLDEH-MFYCKPTHDSLPAPEACAVTGITPQL-CEKKGLIEHEFIK 78 
WP_122951013   1 MKTFYWYDYETFDISPKIGRIAQFAGIRTDENLNILYEK-MLYCKPTNDCLPSPEACAVTGISPQL-CTEKGVIEHQFMQ 78 
1FXX_A        87 RIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEG-INWPENDDGLPSFR 165
WP_011930220  79 KIHAQLSTPDTCVIGYNSIRFDDEFTRYALYRNFIDPYTWHWKNGNTRWDILDVVRLCYALKKDTsLKWVYDEQNKVIFK 158
WP_011738280  79 KIHAQFSTSNTCIVGYNSIRFDDEFTRHTLYRNFIDPYTWHWQNGNTRWDILNVVRLCYALKKDTsLKWVYDKQGNPVFK 158
WP_012823943  80 LIHAEMMQPGTCAVGFNSLRFDAELLRFMFWRNLRDPYAHEWKSGNSRWDVLDAARAFRLLRPEG-IHWPTDEQGAPTLR 158
WP_013255611  81 RINEEFMQPGSCVAGFNSIAFDDEFIRATLYRNLMDPFRREWAGGNSRWDLLDVLRAARDLRPQG-ITWPEGENGRPTFR 159
WP_013388911  80 ILFKEFTKEGTVTIGYNSIKFDDEVTRNLFYRTFRDPYEREWKNNCSRWDFMRAILGVYVMKPEL-LKWPLKDDGRPSFR 158
WP_041193053  84 IIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYG-ITWPYKNNGKPSFK 162
WP_039327669  81 MLSEEIFTPDTIAVGFNNIRFDDEFIRHLLWRNFHDPYEWSWKDGRSRWDLLDAVRLTRALRPEG-IKWPLDDKGEPSNR 159
WP_053820565  79 KIHDEFSKPGTCIVGYNSIAFDDEYTRHTLFRNFLDPYSWHWQNGNARWDILNVARFCYAHKEEGsLNWVKNERNRPIFK 158
WP_122951013  79 QINTEFSVPDTCTVGYNSIRFDDEFTRYSLYRNFIDPYAWHWKNGNTRWDILDVVRLCYALKKEAsLKWVYDENGKPIFR 158
1FXX_A       166 LEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWRGNTSW 245
WP_011930220 159 LDQLSLANNIEHTYAHNALADVYATIAIAKIIKKTQPQLFNYAFSLRKKKTIKEKIK--LFEPMLHTSRVYSATLSCTRL 236
WP_011738280 159 LDQLSLANDIEHANAHDALADVHATIAIAKIIKQTQPQLFNYSFSLREKKTVASKIS--LFEPMLHTTDMHPAQLSCTRL 236
WP_012823943 159 LEALTKVNVIAHANAHDALGDVEATLAFARLMRAQSPKLFEYLLSLRKKAVVADFVDNPERASFVHVSGRISSTLGSASV 238
WP_013255611 160 LEKLTEANALPHQNAHDALSDVRATIAMARLLREKQPKIFSYLYRGRIKDHARQLIDLHKRRPFLHTSAMLSNEYGYTSI 239
WP_013388911 159 LEELSIANGIIHENAHDAKSDVYATIGLAELISKKSPNVFDYFFNLRDKDFVKSELS--KDELFLHIDFGYGYDRGYASI 236
WP_041193053 163 LEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISL 242
WP_039327669 160 LELITSANGIAHENAHDALADVTALIAVTKLIKQKQPQLYDYLLKMRDKKVVQQLVNVDDKKPFVYASGRYDKEFAKTTV 239
WP_053820565 159 LDRLAPANHIEHTNAHDAMADVRATIGIARIIKDTQPKFFNYALSLNDKKEVAQLVK--PLHPMLLTSSSFGYKSSFTRL 236
WP_122951013 159 LDQLSLANGIEHSDAHDALADVRATIAIAKIIKDTQPQLFAYAFSLRQKKTVEQKIK--LFEPMLHTSGMYSATLSCTRL 236
1FXX_A       246 VAPLAW--HPenRNAVIMVDLAGDISPLLELDSDTLRERLYTA--KTDL-GD-NAA-VPVKLVHINKCPVLA--Q-A--N 313
WP_011930220 237 SVALAY--Hs-yHDRVFVFNLDQDPCILLELNIKTLKTLMFTKnnQSAL-SK-EMKgLQIKELIFNKSPMFV--PnV--Y 307
WP_011738280 237 SVALAY--HPeyNDRVLMFNLDQDPCVLLELDIEALKTLTFTK--QSEL-SK-EVErLQIKELIFNKSPMFV--PnI--Y 306
WP_012823943 239 FANLGQ--VQgiNTQRLLWDLRFDPTEVLDDDMETLAARRFLR--DADA-QD-NQHrLPIKLLHLNRAPVVV--P-N--A 307
WP_013255611 240 LAPVAP--HPanQNAILCFDLRQDPEPLIERSVDELRRLIFAP--SEEL-SL-EESrIRLIPIHINRSPVLA--P-L--S 308
WP_013388911 237 IYKIGDfiNQgdKNAFLFIDILSDVENLEKMDFDEIKEYLYYS--NEKL-EEiGITrPGLKQIRINQSPLVI--P-Y--N 308
WP_041193053 243 MWPICI--HPmnKNILITWNLLHDPKKFLLNDINKIRDYLCFK--KNSF-KEd----IPISMIHLNRSPIVIs-N-L--K 309
WP_039327669 240 AFPMTTs----rNGGVVVYDLRYDPTPFVELSTEELSKKIFAS--WEERqAE-DFVkLPVKELQYNRCPAVA--P-L--G 307
WP_053820565 237 VTSICN--HPeyNDRSIVFNLNQDPEIFLELESEELKTLTFSK--KSDL-PK-GIEkLDLSELVYNKSPMFVcsPnSdnF 310
WP_122951013 237 AVALAY--HPeyNDRVIVFNLDQDPSILLESDKETLKKQLFTK--QSEL-PE-GVErLQIKDLIFNKSPMFV--PnI--Y 306
1FXX_A       314 TLRP--EDADRLGINRQHCLDNLKILRE---NPQVREKVVAIFAEaE-PFTPSDNVDAQLY-NGFF-SDADRAAMKIVLE 385
WP_011930220 308 KLES--KIIKQLKIDMSTCLQRLEFIKKn--QVIISKVVQDLYRN-DqQRQPSSDVDQALY-DDFInDNTDKHICNQIQT 381
WP_011738280 307 KLEP--KIIKQLNIDMNQCMQHLSFIKDn--QLKIGKIVQDLYKN-DqKHIALKEVDQSLY-DGFI-DNTDKRICNQIQA 379
WP_012823943 308 ILKEg-DIVERMQLDLDAVQKNTRTMAQf--KREVADKLHAVLAE-QmAF-ASQDAECALY-EGFM-PNVDRYALDDFNR 380
WP_013255611 309 TLDP--DTAKRLGLDVTLCGKRAAKLAE---ASLLTQKIMEVFRR-D-EAEIRRDPELEIYsGGFF-SDADRQRMERFRE 380
WP_013388911 309 NLREkpKFLEEISVNLKYKMEKIKKL-----SAKRKEEFLNVFTR-E-KDKVKIDADLDIY-GSFA-SQWDKKEMAAMHR 379
WP_041193053 310 VLSS--NLMFRYKFDLNCAFKNIKCASSilnNTYIWKKIFLDYKI-N-NSDLELNIDEELY-NNFI-SKKDNFKLAILRS 383
WP_039327669 308 VLEQg-DGWQKISLDLKTVQKHQNILLN---HPDFAEKLRTIFEN-KpAFKKLPDPEAQLY-DGFL-NDRDRIRVEAVRN 380
WP_053820565 311 KLSP--ILIEKFELNLDKCLKNLRFIQHn--SQSIEDKVRAIYRN-DsDREPSRDVDQSLY-DGFI-SNNDRQICNEIQN 383
WP_122951013 307 KLEP--KIIEQLQIDMDACLQRLEFIKNn--QTEITKIVQDLYYN-EqKRPPTADVDQSLY-DGFM-DNADRRIGEQIQT 379
1FXX_A       386 TEPRNLPAL----------------DITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPe------fLQGY 443
WP_011930220 382 LSTNELKNF----------------HPKFKDNRLSKLLIHFKARNYPNILTENEKEEWFKTVQERVQTgkng-yttIDDY 444
WP_011738280 380 LSVHKLKEF----------------HPKFKDEKLSRLFMHFKARNYPNTLTENEKEDWFEIVQGRIQTnqng-yitIDDY 442
WP_012823943 381 VFDQAMAAGgsaqdepvtealrklmAQSWQDARLPELVFRFVARLRPDLLNEDERTQWQSWVDSRLNAapdqrymgFAGF 460
WP_013255611 381 LSPEAMLKR----------------RGDFYDRRLPELAWRFVCRNHSEILDENERKKWKSFCAGRLLFpperlindFAFF 444
WP_013388911 380 ENYQYIP--------------------KFKDKKYKELYFRFIGRNMPEILTEDEMSEWKRHCYKCISNereg-fqnIDSL 438
WP_041193053 384 MSPKKLSNV----------------NFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNkknn-lynINMF 446
WP_039327669 381 ADERELADF----------------HPEFQDERLAPLLLHYKARNFPRSLSEDDLAQWEIWRAQYLQAq-------LPGF 437
WP_053820565 384 LSPTQLSEF----------------VPEFEDRRLTKLFLNFKARNYPQLLNEFEQEQWFEIVQSRIQSgang-flsIDSF 446
WP_122951013 380 LSADQLKTF----------------HPRFKEEKLSTLLMHFKARNYPDTLTQDEQEDWFEIVQGRVQAgeng-ylsIDEY 442
1FXX_A       444 ADELQMLVQQy-ADDKEKVALLKALWQYADEIVE 476
WP_011930220 445 LARINIIRKQ----HPNQEKLWKQLETYSKSFF- 473
WP_011738280 443 LQKINTMRTQ----HPHQEKLWQQLEAYSKLFF- 471
WP_012823943 461 FAAIDALMADaaYRDEATLALLTQLKAWGETRir 494
WP_013255611 445 KRKVKELSGDt-NLPAGDKKIIKKLAEWATIIEV 477
WP_013388911 439 KNEILELEKKy-RGEKEKIKILKDIKIYAENLEK 471
WP_041193053 447 YLEIESLLKK---ANEHDTKILNALLMYGKSITQ 477
WP_039327669 438 MASLQRLAPT---AADKQQFILQELQLWAESVLP 468
WP_053820565 447 ERSIESLRET----QPRRENLWKELEDYAQSFi- 475
WP_122951013 443 SNSINTMRQT----HPDKEKLWQQLEEYAKSFF- 471
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