Conserved Protein Domain Family
RnfB

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COG2878: RnfB 
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfB subunit [Energy production and conversion]
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfB subunit is part of the Pathway/BioSystem: Na+-translocating Fd:NADH oxidoreductase
Statistics
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PSSM-Id: 442125
Aligned: 429 rows
Threshold Bit Score: 167.479
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013063846   1 M-NFILIAVIVLGAIALIAAIVLFAASKKFAVYEDPRIAQVGELLPGANCGGCGFPGCSGMADALVKgadAgSLDGLMCP 79 
WP_012446982   1 ----MYAAVLSLGGLGLFFGLVLAYASQKFAVEVDPKVEAIDESLPGANCGACGYPGCGAFAEAVAN---G-EAPIDGCT 72 
WP_012447545   1 ----MIEAVLSLGAIAFIFGSVLAYAAEKFKVEKDPRIEAIAEVVPGANCGACGYPGCEAFAEAVAR---G-EAPPEGCT 72 
WP_015879396   1 Ml--TLLYLLAIPLIAAGIGYALGYAAIHLKVEGDPLVDEISALLPNGQCGQCGYPGCTQAAKAMAC---G-EAAPDVCP 74 
YP_001252917   1 M-NELLFPILSLGALGLVFGVLLGYASKKFAVEVDPKVPLIRDSLPGANCGGCGYAGCDAYAQAVAE---G-AAPANACT 75 
WP_013386485   1 M-EAILIPVLILGGIGLFMGLFLAFASKKFEVEVNPNVEKIMEVLPGINCGACGFPGCAGYAEAIAL---E-GAEITSCA 75 
WP_040198665   1 ----MLEAIVSLGGIGLSAAILLGLASKKFAVEVDPRELEILDALPGANCGACGFPGCAGFARALAE---G-KVDPAACT 72 
WP_053549287   1 ----MIEAVLSIGGIGLLAAVTLGVAARKFAVEVDPRELALLETLSGANCGACGYPGCSAYAKAVAE---G-KAEPSLCT 72 
WP_128700464   1 MaTSIIASIATLCGLGIFFGFVLAYAAKKFHVPVDPTIERILAKLPGANCGSCGKAGCMGFAQALLA---G-ELDLHSCS 76 
WP_128743346   1 M-NEILLPVLIVVVIGLLSGLILAVASIVMAVPKDQKTEDVRAMLPGANCGACGFSGCDGYAKALAE---G-TAKPGLCT 75 
WP_013063846  80 VGGAETMGKVADLLGMAIAN-S--------------------EPMVAVVRCNGTCEHRAKIAEYS-GLRTCAaMHACg-A 136
WP_012446982  73 PGGENTAQTIADILGVSHEE-Se-------------------ERYVAEVACLGGSEHCKEQFDYD-GVQDCRaAMMYa-N 130
WP_012447545  73 PGGKKAAEQISEILSNGAGE-SnefstlgyvketnkviqepsQKYIAEVACLGSREYCKEKFEYD-GVRDCRaAMMYr-N 149
WP_015879396  75 PGGDALAQKIAAVLGVSL------------------------D--------SSG-SKG-PQ------------VAAI--- 105
YP_001252917  76 VGGASVAEKVAEIMGVSIDE-S--------------------EPLKAYVKCNGTCDKAKQRGEYY-GTMDCQqASVVpgG 133
WP_013386485  76 PGGTAVVESIGKIMGLTADTgG--------------------EKMVARVLCQGDNTRTNKLYDFDvELKSCAtAMLYf-G 134
WP_040198665  73 PGGQATIERLASILGVSAKL-R--------------------EPEVAVVICQGDRVKAKDKYRYL-GVEDCNaAQKLa-D 129
WP_053549287  73 PGGQSTLEKIAHIMGVAAVG-A--------------------APQVAVVLCQGDNLRAAAKYRYL-GVVDCVaAQRIa-D 129
WP_128700464  77 VAATENKKDIAAILGLSLEE-K--------------------AKKVSCLHCCGG-NHAKDKFLYD-GIKDCLaASLVl-G 132
WP_128743346  76 VGGNDVANAIAAYLGVAATS-V--------------------EPHMSVVRCLGSHDNTTDRVEYE-GITSCAaAAAVa-G 132
WP_013063846 137 GETACGFGCLGCGDCVAACQFGAISLNPeTGIPEVDDEKCTSCGACVKACPRNIIELRKKG--PKnrrVFVs-cVNKDKG 213
WP_012446982 131 GFKACDYGCLGLGTCEHICPFDAIEMQD-NGIPHIDPEKCTGCNKCANTCPKDVIKMINAN--TK---HHVr-cNSCDKG 203
WP_012447545 150 GPKACEFGCIGLATCVETCPFEAIEMRD-DGLPRINHDICRGCATCVNTCPKSVIRLIPGD--RYk--HFIy-cNSQETG 223
WP_015879396 106 ----DMDGCDGCGRCIKQCSYDAIVGAT-RQLHGVIADACTGCGACVAVCPHNGISLYPDPafMSrvtkpgviqtatlEV 180
YP_001252917 134 ASKSCQAGCLGLGSCVKACAFDAIHVTE-GGTAEVDPEKCVGCGACVKACPRAVIDLKPLS--AV---IRVa-cNSKDTL 206
WP_013386485 135 GDKSCWHSCLGYGDCAAVCPVDAITITD-KGVAVINEDKCVSCEKCVKECPKRVISMTPQS--QK---VTVl-cSSREKG 207
WP_040198665 130 GPKACPGGCLGLGSCVRACPFGAIEITK-QGLAVISREKCTGCTKCIAVCPRQVIRMVPAS--AT---VHVl-cNSHDKG 202
WP_053549287 130 GPKICPGGCLGLGTCARVCPFGAIEMTS-EGLAVISREKCTGCRKCVGACPRQVIAMTPLD--AT---VHVl-cNSHDKG 202
WP_128700464 133 GQKECAYGCLTYGTCVKACPFDAIEMTG-EGFPRVIESKCTACGICVNVCPKGLYTLIPFE--PEkakIYVa-cTSNDSG 208
WP_128743346 133 GPTSCTFGCIGLGDCVNSCDYNALSV-R-NGVAMVEPKNCVACGMCLKACPRHLLTLVPVK--KQ---AVVl-cSNCDKG 204
WP_013063846 214 PVAMKAcaVSCIGcgKCEKECNFGAITVENNLAYIDHTKCRLCRKCVTVCPKHAIVD 270
WP_012446982 204 KTVRQVceVGCIG--CGVCAKVCPVDAITIENNLAYIDSHECVNCGKCKEKCPRDCI 258
WP_012447545 224 EIVKENcqYGCLGcgICREQCPVGAINLDNDLAVIDQNKCVNCGLCKDKCPTACIVS 280
WP_015879396 181 KNA------------------------------------------------------ 183
YP_001252917 207 KAVKDVcqVGCMTcrLCEKTCPVKAITMENNLPVVDKEKCVKCMACVKKCPTNALIA 263
WP_013386485 208 AVARKNcsVACIGcgVCVRACPVDAIDLNNNLAKIDPEKCIQCGLCAIKCPTNAITS 264
WP_040198665 203 AVVRKYcqVGCIAcqickkaapeayviedflarvvyahhgqaapaiekcpthcirdf 259
WP_053549287 203 AAVRKYcqVGCIAcmickktvpeayviedflakvvyehyqesgaavekcptkcirdf 259
WP_128700464 209 KVVMSVcgVGCIAcrRCEKACPHGAVAVIDNLARIDYDKCTGCLECAKVCPTKVIKV 265
WP_128743346 205 NVVNKVckVGCIGcmKCEKTCKYDAVHVKNFLAAVDPEKCVGCGECVEACPRHIIGL 261
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