Conserved Protein Domain Family
RsmC

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COG2813: RsmC (This model is not part of the current CDD release)
16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG [Translation, ribosomal structure and biogenesis]
16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG; is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
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PSSM-Id: 512523
Aligned: 920 rows
Threshold Bit Score: 75.9309
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015779706   1 Madhyfsatpasp----------------------------------------------------------------aeq 16 
WP_014753046 102 Mgrwsrpwsrla------------------------------------------------------------------da 115
WP_221832020  61 Lsrlsqninengtvlcgfmtrnftpawlklaetyf--------------------envsqsrahkkarvlilknpkpksd 120
WP_010848537   6 Ldvfqedpndaekvlir---------------------------------------------------------alhdtd 28 
WP_202108781 112 Lnlleekldkggyiytagsndggaksadsllkpmgst-----------------ikvdlarkctlfkaiyenpvntysqp 174
ALU75331     122 Lqqiyksadentvvvcgfmtkyfsraylkkaeryfe-------------------eveqtnawkkarllvlktpkkevee 182
WP_180692853  10 Fdelrrgrlpatmatmlspfs------------------------------------------------vdeherhvval 41 
WP_013762847   1 Madkit-------------------------------------------------------------------------- 6  
WP_114982725 133 Lrhawllskgnpdfqvfagfmtrhftpqmlkisaryfehaeqslavkkarvlklkgpkpaepelsedagmeallkeiswk 212
WP_149486083 122 Lqkiragiqketeilaagmsrylpasyfecfqaetq--------------------datysriekkaryykgvlkpqtem 181
WP_015779706  17 reitvelagERRRVVTAGG-----VFSA-EHLDHATAF---LLDAVPVp-----EAlaargEGvQLLDIGCGWGPIALSL 82 
WP_014753046 116 vrsgttvedQGLRLGDdPAymrdfILGMhEYARRGAAE---LPSAIPL------EG-----LR-RGVDVGGGAGTYAIAL 180
WP_221832020 121 iliqeytddKGVLWKQYLG-----VFSA-GRIDYASQF---LMEEIVL------PK-----ID-VAVDVGSGNGVLGKFI 179
WP_010848537  29 fptefsllgRQwELI--RG-----VFP--GTLTGATEV---MASALPY------PV-----GG-RMLEVGCGSGVISVTA 84 
WP_202108781 175 kdidvaigdISMKLHQDTA-----VFSQ-GKLDKGTEL---LLNSIAKi-----VP-----QG-KALDLGCGCGVVGIFL 234
ALU75331     183 rallneikfKEQIIKQYYG-----VFSS-DKIDYGTQF---FLDNLKVq-----EN-----EL-KVLDVASGNGVIAWDV 242
WP_180692853  42 aedggrspvHGLEIDTPPG-----LYRP-HAASSSQFI---LRTLLREr-----PR-----LG-RLLELGCGTGVLGLTL 101
WP_013762847   7 ----------fsfgeN-WS-----AYKK-KA---SPEQfdaSLEDLETwlgtenIK-----GK-RILDIGCGSGVHSYNF 60 
WP_114982725 213 lpahlvqdkESIPLKQYYG-----VFSA-DAVDEATAL---LIAHLELk-----ES-----DR-TILDLACGNGVIAKAV 272
WP_149486083 182 svqsssyvwegRRYISLPG-----VFSH-RGVDPGSGF---LLKNMPDl-----PV-----PK-VIIDPGCGNGILGLEA 241
WP_015779706  83 ALQa-PQA--TVWAAEVNERAADLARANAAR-LGVLaerpgapgVHVVAPEE----Vp--dEARFDGIWSNPPIR----V 148
WP_014753046 181 ANAa-PEL--KLTVLDLTP-VLDITRAMVDA-HGLTg------rIDTGVIDYrldrF----GEDLDLVLMSNVLH----Q 241
WP_221832020 180 HEHy-PES--EVHLTDDNYLAVESGKLNVNA-ENVYh----------HFSRDls-fLk---DNSCDLVVTNPPFH----F 237
WP_010848537  85 ALN--GVS--EVVALDINPNAVTNTLRNAIR-HGVEt------kVSARVSDVfs-aLe--mTEDFDLIFWNVPWTy--vD 148
WP_202108781 235 SKL--GFK--DITSSDVSASALHLTLENTCL-NSVTd-------VKIVAADMlt-gL-----DKYDVIAVNPPFH----V 292
ALU75331     243 LQQn-PEA--QVTLVDDFNVAIASSKLNITA-EN----------AEFVCADTln-dLe---KDTFDLVVSNPPFH----F 300
WP_180692853 102 LYQg-LAD--EVLMLDVTDAAVHAAQANLER-AGLAa------rAQVRQGDLfa-pVagpaPQRFDSVLFNLPLMhadhG 170
WP_013762847  61 YRLgaKE----LTSFDYDVHSVNTTREFWKEaKEPSn-------WTVFQGSVldekLma-gLGKYDIVYSWGVLH----H 124
WP_114982725 273 TLL--PSAdrEVHALDDDFLACASARLNLGE-AAM-----------VHHYDGld-mFp---SDFFDVILTNPPAH----L 330
WP_149486083 242 LNIw-PEA--RLTATDENALAVASTLQNSER-AGVAe------rCTVLQTRIlr-gIa---QESADLILCNPPFH----R 303
WP_015779706 149 -G----------------KEALHEILAHWLPRLRADGAAWLVV----GKNLGap--sLQRWIG-ELSGnfspeasdgtlq 204
WP_014753046 242 eS----------------DTVCLSMLGRARDALRPGGRVVVQGh--fVQPDRtg-plFATLHNlSALAl----------- 291
WP_221832020 238 -Eye------------inMDVAFQIFKDALRVLKNNGELWIVA----NNNLP-----YKPELL-KSFS------------ 282
WP_010848537 149 -GdfdmaselhaavfdpeYAGQRRLIQGASAYLRKNGRLLIGTadlkNGTVLe---aIAKSTS-ATLSm----------- 212
WP_202108781 293 -Gis------------ttTAPTINMIINASEHLNKGGVLYLVA----NSHLG-----YCEILK-QNFS------------ 337
ALU75331     301 -Ehe------------nnIEVTIELFKGVARCLKQTGRFVLVA----NTHLN-----YKTHLE-KVFT------------ 345
WP_180692853 171 -Grrhpa------lddtaGQLAWRFFEQLPAHLAPQGRAFFSYa---NISDPapleaLGEQMAvELLA------------ 228
WP_013762847 125 -T-----------------GSMWQAIYNAIQTVADGGLFWIAI----YQGVDty--eYDLELK-KRYN------------ 167
WP_114982725 331 -Ehe------------nnIEVSLSLFKQASKKLKSGGSLWVVA----GTHLN-----YSTHLQ-QWFS------------ 375
WP_149486083 304 -Ght------------vsLETGFAFIRESSAVLREGGYMALVV----NKTLG-----YGNILK-ENFQ------------ 348
WP_015779706 205 vdsfT-------CDR--V--ARHK---GFWV----------L---EAR-P 226
WP_014753046 292 ---wSgghsrtlEEMaaL--AGRS---GFTEvttgpvgksgLsmvTAv-R 332
WP_221832020 283 ----N-------CEV--K--AQNR---RFII----------Y---KCV-K 300
WP_010848537 213 ------------VQR--IrrIEAPrvmEYHL----------M---EVcy- 234
WP_202108781 338 ----S-------VEI--I--GSSN---TFTV----------Y---KAV-N 355
ALU75331     346 ----N-------IKI--I--GNTN---KFHI----------I---EC--K 362
WP_180692853 229 ------------AEW--V--ARSG----FWLf--------vY---EARpK 247
WP_013762847 168 ----N-------ASW--L--GKKAmv-wYRI----------L---RKi-K 187
WP_114982725 376 ------------CEV--K--AQTG---GFEL----------L---VCT-K 392
WP_149486083 349 ----K-------VNI--L--KQNS---KYRL----------I---LCR-K 366
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