Conserved Protein Domain Family
YgdD

?
COG2363: YgdD (This model is not part of the current CDD release)
Membrane protein YgdD, affects sensitivity to antimicrobial peptides, TMEM256/DUF423 family [Cell wall/membrane/envelope biogenesis]
Statistics
?
PSSM-Id: 512507
Aligned: 860 rows
Threshold Bit Score: 46.3006
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_077025230   1 Mt----------A-KR--------CLVLAAVFGFLAVLLGAFGAHGLADSkFlTDkyhqmppkavagfevpapyKYLQDY 61 
WP_012536466   1 Mag-------hsAgRKcgiqagayFAMLGALVMALAVIAGAAGDHLVAGR-V-GD-------------------RALHIY 52 
WP_070078466   1 M-----------N-RS--------FVALGAALGMIYVIMGAVSDHVVHAE-V-DA-------------------HLFRIF 39 
WP_156573717   1 MpdarpnpapvpH-RG--------VLAIGLLGGLLAVILAALAAHGPLAP-T-DV-------------------TGQRQI 50 
WP_012823857   1 Mt---------aP-RI--------WLFLGIVNALLAVILAAAGAHGPMAP-T-TP-------------------FLQHIL 41 
WP_015781342   1 M-----------K-KH--------FILHGAMFMAFGVALGAIGSHALS---L-SS-------------------DMQRLF 37 
WP_075084297   1 Menq-----kpnR-KS--------WIVVGCLLAAISVACGAIGAHLLENW-L-AEnfe-------------daiRRQELW 51 
WP_012462449   1 M-----------N-RL--------KIALAALLGCLAVICGAYGAHGLKLPpQ-DS-------------------HYLEMW 40 
WP_169543239   1 M-----------M-TFp-------WISVGAILGAAAIILGALGAHLPAEE-V-V---------------------VGRFH 38 
WP_157732090   1 Mte--------rS-RF--------WIACGAILAGLSVVLAAIADHVLKGN-W-GV-------------------VEARQF 42 
WP_077025230  62 HTAVRYHMWHALALLGVGLLLQRgp--skLLSAAAWSFTAGILLFSGALYVLVIGGRHtAGldwaMVAPFGGTLLLIGWA 139
WP_012536466  53 DIANRFQIYHGLGLLLIGVLIRQygr-rrLLCAAGLLMALGVLLFCGGLYLLVLTGYSfWA----FFAPMGGTALIFSWL 127
WP_070078466  40 NIALRFEIGHALGLILIGLTAAHlgr-srLLTIAGWLMFAGTLMFSGSLYLIVLTGHPgLG----IITPFGGSALILSWL 114
WP_156573717  51 DTANLLHFVHVLGLMLLAFWPGPf----pWRLATAACWIAGTLLFSGSLYALVLFGQAwPG----LVTPLGGLLLMLGWL 122
WP_012823857  42 STASLFHLIHSLAMIQFGLWLAQnp---nHYNFTGIFFLTGTVLFVGSLYALVFTTITfPG----LLTPIGGALLMLGWI 114
WP_015781342  38 ELGVQYQIYHALGLLAVGLMSGYla--nrKGELAGWLMFAGIVGFSGGLYFYALTGNElIR----KVIPLGGSLLILSWL 111
WP_075084297  52 ETASRYLMYHALGLLAVGLAGSIss---fRRNVIGATMLLGVILFSGCLYAYVLTDVKpLV----HVVPLGGMSMIVSWV 124
WP_012462449  41 KTAVQYHLVHVLGLLFVGSHk-------qGFWLPYLLFLLGIVFFSGSLYILVLTKSFfWA----KFTPFGGMAFILGWL 109
WP_169543239  39 NTALLFHMVTISPILVIGLLTGKvskghrYFHLSASLLTLGVLFFSGSLYVRSFTGEAiGF----YITPTGGILMIAGWL 114
WP_157732090  43 ELAVRYQFYHAIALVLCGLLGLCgk--frGLSIVAVGFLLGIVGFSGGLFLKVCLPQInLG----PVIPAGAVLWIISWV 116
WP_077025230 140 TLAVAL-C-----R 147
WP_012536466 128 LLALGI-W-----R 135
WP_070078466 115 LFTLAV-I-----K 122
WP_156573717 123 AWLTGI-I-----R 130
WP_012823857 115 TWGLQVaFpskkqp 128
WP_015781342 112 VFFWAV-I-----A 119
WP_075084297 125 MFAWFM-Ffsqtnd 137
WP_012462449 110 GLSIES-Lf----R 118
WP_169543239 115 FLAIGG-F-----L 122
WP_157732090 117 GLAVTA-VipvknR 129
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap