3S4L


Conserved Protein Domain Family
Cas3

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COG2254: Cas3 
CRISPR/Cas system-associated endonuclease Cas3-HD [Defense mechanisms]
CRISPR/Cas system-associated endonuclease Cas3-HD is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 441855
Aligned: 23 rows
Threshold Bit Score: 145.299
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3S4L_A         7 MEVLAFKN-QSLIDHVNDM---------------------------VKYWER--IKYRYLKTIKRALealniKLD----- 51 
AFH42053       1 MSFWARKG-QMLDEHIKKM---------------------------IDFYEKcyKRRKYTARLSKRL-----GIP----- 42 
WP_009988400   1 MTCWAFYGmETFKQHSLGI---------------------------LNFFRD--NFSYIIPIISYRT-----GID----- 41 
WP_010923404   2 IKPCAYEK-QGLIDHAIGS---------------------------YKVLHDk-ISESYYKVISRRLerygiVLD----- 47 
WP_011007010   2 KQLLAWCG-QPLIEHIERVgdiaagreeaiktvaeavkaklcreldIELLER--ELYSTYAALAARL-----SID----- 68 
WP_010977966   1 MTCWAFYGkETFKDHALGT---------------------------LNCFRN--NFEYIIPILSKRS-----GEK----- 41 
WP_010980736   2 KKPCAFTN-QPLLDHSKGS---------------------------LNSMKKi-LSDSYVLTAKRRLekfgiKVK----- 47 
WP_012021088   1 MKPCAFEG-QGLRDHALGS---------------------------VREVQRv-FGESYFQVMKRRIdalvrRLDnkqsl 51 
WP_013776534   5 SKPCAFIK-QTLFDHSMGS---------------------------YAVLSKf-INYTYYAVISRRLksvgiQLK----- 50 
WP_126450820   1 MRPCAFAG-QGLVEHSIGS---------------------------VNWMDRa-FDLSYFSVVANRVnrltqGIEa---- 47 
3S4L_A        52 ---------IEKV--DEFMKILIKLHDIGKASKIYQRAI------INDqe----kLMGFRHELVSAYYTYHILLKKFGDK 110
AFH42053      43 ---------EREL--DMAMVSTIIFHDMGKIFYHNPETK------EPP-------ESFAGHEILSSLVMHIASKKLELKK 98 
WP_009988400  42 ---------KETV--RKSVEIGVSLHDIGKTSKYYD-------------------MSYFGHEFYSGYLVYKILRECCDSE 91 
WP_010923404  48 ---------LNGV--KEIVKDVVVLHDMGKAGEYYQNQFddn-cnPLKsnplksrFSFIYHELGSALFFYNDYEPINVEK 115
WP_011007010  69 ---------NELV--RRLAGVAGYFHDIGKAIGAYQSRF------PSDkcgdckgVSLAGHEVWSAWIAYFAVRESPDLK 131
WP_010977966  42 ---------IENV--RKSIEIAVAFHDIGKASKKYI-------------------NSYYGHELYSGYIISRIIRNCCDNK 91 
WP_010980736  48 ---------------KEDFELSVLLHDIGKAGEFYQTQFdde-cnSSRt------PSFIYHEIGSAIFFYKNIEdk---- 101
WP_012021088  52 dssfikgisAEQW--RDLTFFLVAFHDIGKAGEFYQNKFnedctpKER-------ASFAFHEVGSSLYLYRLRWRnd--- 119
WP_013776534  51 ---------PEEV--KRLIEISVKLHDIGKAAEYYQNQFden-clSNKk-----ePSFIFHEIGSSLFFYYSNYTnd--- 110
WP_126450820  48 --------pVDKWwtHELTAILTVLHDVGKAGEGFQSQFddg-cgSQR-------SSFKLHEIVSAVFLYRNQVKVAGEE 111
3S4L_A       111 N-----LAF-----IGALTVMLHHEPIIMG----Q-IRNLKKKELTaevvldkLKKFDGMIEDF-------EDLIKKLIG 168
AFH42053      99 NmkpddFSFyavpiSMHLAVRAHHLAMGDRlstlAiINRFYGRFLNst----yRSKIPFILRDFl------AKVVNGMGL 168
WP_009988400  92 ------LKP-----LIALAAMSHHQGMEGRt--------lNEMILKgny---------trIPSFyelreecRNDIVEILG 143
WP_010923404 116 ae---eVRS-----LLTLAVINHLNAI----------RGISDYLLNrfp--dnFDEEMIKLSKYg------sILLENLRG 169
WP_011007010 132 KeksevFAR-----IIAMAVALHHSAR----------RSIDDVVLDavhvrptLDDLDLMFELA-------RAGLERYGL 189
WP_010977966  92 ------LRD-----IVALAAMSHHQAMVERg---------lELIKNnmy---------vrIPQFefn-eecKGDINEVAK 141
WP_010980736 102 -----kLKL-----LIALAELNHLNTI----------RSISQLNPNsfp--kkFDLGMIRLKRFg------kIVLEEIGM 153
WP_012021088 120 -----iLRF-----WSVLTTMNHLNAI----------RSLDNLEEArrw--isKEPAILHLRRYg-----sLGELEVFAE 172
WP_013776534 111 ----nkVKR-----LLALAALNHLNAI----------RGLADFKPNqlp--kgAKEEMLKIEKYg------kVLLSKLGF 163
WP_126450820 112 lr--giRKF-----WAVMTVINHLNAM----------RGLHTLNDAqla--tlRD--KLKLSKYg------nTLLQELSN 164
3S4L_A       169 Ysigdi---ikndS-NKDDIIRF-VIEMSVRARh-------TPNSEKLRFIVGTLLLPLVMCDYKGA--------ESREG 228
AFH42053     169 Eewlem--rekveDeELKGLIET-YKEFTERYLawnifemhEPKAAKVSMMAQHILKVLIMSDNYSAsqvesdmgEERNI 245
WP_009988400 144 Eigvkv--kdfpqKvTRSDVKSW-FQK----------------LNIKWKNLYVIILGPLMISDTVVAn-------KNRGG 197
WP_010923404 170 Iisks----lkvrDySFTDYHDM-LYAFSK-------------KSDKYLKLYNLFLAPIMLGDNLDSs-------LVRNN 224
WP_011007010 190 SfsqaakaaaryhLlRFYDITAL-REKLLSTDPap----------------aELLVHVITTADNLDAv-------LNRCN 245
WP_010977966 142 Eikvsi--didltYiTPNDVVSWlLRN----------------KHIKEFYYYPIVLGPLMICDTYTAy-------QHRSD 196
WP_010980736 154 Enft-------ieDyTFDDYHEM-MNDLVK-------------ENGAYLKLYSLFLAPIIVGDNLDSs-------LARGL 205
WP_012021088 173 Rvswavk-vtppeNyNVGDLQDM-ETWLRDK------------TNLRLNKGYLLLLLPVIVGDNLDSs-------AQRER 231
WP_013776534 164 nfe--------vrDyTTDDYIKM-MNDFINRp---------KDEDLKLYKLHNLFLAPIIIGDNLDSh-------YARSI 218
WP_126450820 165 Rgfdvg--hmragDyTIADVQDM-VQWLRGL------------STRSEGKLYVLFLAPLMIGDNLDSs-------VARER 222
3S4L_A       229 KAPKF 233
AFH42053     246 KKKFF 250
WP_009988400 198 DQYnk 202
WP_010923404 225 GSktr 229
WP_011007010 246 GRIAY 250
WP_010977966 197 TQYen 201
WP_010980736 206 NErrr 210
WP_012021088 232 DEDSR 236
WP_013776534 219 SErrr 223
WP_126450820 223 DETSV 227
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