Conserved Protein Domain Family
COG2251

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COG2251: COG2251 
Predicted nuclease, RecB family [General function prediction only]
Statistics
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PSSM-Id: 441852
Aligned: 108 rows
Threshold Bit Score: 231.769
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012725295    8 FIYSPTDIARA-ECPYAALCVA--DeklglaeplvVEDAMLERAARLGDAHEARVLAAYrarfgsfdpaqrrgvaeiGDD 84  
ARU40982        1 -----------mKCPKRLWLRWnqPd---------LGVVDEAMLARAEIGQKIGILARGlns------------------ 42  
WP_011813233    1 --------------------------mprlsksrfiagwqcplrlwytvhepwratppdpqlqaifdqghrlgqlaqqry 54  
WP_081430059    9 ENIWFDDIEQFlVCPRRYCIEKt------------------------sRNYE-------------------------RIP 39  
WP_013218350   22 KLLTKSRFMAGlQCPRYLWLTTnqPk--------sLPAPDLVTRNVFDQGHQVGELAKKlfp------------------ 75  
WP_013505043    2 QHLSKSRIIEHrQCARRLWLRVhrPd--------lDTQASTSAQSRMQAGTHAGEVACSlfp------------------ 55  
WP_013248296   13 YRLSKSRYLSGlQCHKRLYLEIhaPa--------lATKPDAATQAILDMGTDLGELARRrfpg----------------- 67  
WP_068616614    6 PHLSKSRLLSAwQCPKRLHLEQhhPe---------LGETSLSTESLFATGNQVGAIAKAlydn----------------- 59  
WP_108080404    2 RTLSKSKLLAYrQCPKRLWLEVhcPk---------lREDSAATQASFAVGHQVGDIARRlydpkg--------------- 57  
WP_114912702    4 PHLTKSRYLAGlQCLRRLWLQVheP----------QGYEEPAPGSPIDVGLEIGRKAQLlfpg----------------- 56  
WP_012725295   85 versgAEFRAS-LPRAREETLAAIA-GG---ADVVFQATFF-DG-RFYGRADFLLKT-QDDSREATYAVVDTKLTEKVRT 156 
ARU40982       43 --ggvEVPGDS-LSERLENTAQMMR-DG---HRVLYEAAFAvD--GLFAQVDILFRIgEa------WGFREVKSAKTVND 107 
WP_011813233   55 psgvlveadyrhtrqaleQTQVLMAdPG---VPAIFEAALEhD--QVLTRVDALVRNgDg------WDLVEVKGATRAKE 123 
WP_081430059   40 d---------------eQKTRELMK-LKfsiEKPVISADLF--GnTLISSPDAIVPHg------EMWKILMKKTAKRFKK 95  
WP_013218350   76 --dgvDLAGLG-FQQSITETARRLKy-----RQPVFEAAIRa-G-QLYARIDILAPAaNg-----gWDIVEVKSSTSVKE 140 
WP_013505043   56 --ggrMIEAEK-LSDAIALTTDLLNrKP---KPTLFEATFShS--RVLVRVDILQPVrGg------YDIVEVKSSTEIQG 121 
WP_013248296   68 -grlvTAGYRQ-SQEALAQTAELLQdST---VSAIFEGAFQfD--QVLIRVDVLERVgvNASGQPTWRLVEVKSSTKLKP 140 
WP_068616614   60 -ndsiEIPYDKgLTAALHQTTQLLAsNF---HQPLFEATLHhD--GVLVRVDVLLPDgDh------WRAIEIKASASVKD 127 
WP_108080404   58 kgvliDPQADG-FDAAFARTQELL--QS---AQPIFEAVFRaE--GALALADVMLPV--RKNGKIAWRMVEVKSSTSVKD 127 
WP_114912702   57 -gvrvEEAPWQ-HADAVARTAALMQdPS---IPAIFEAAFAhH--DVRLRVDVLERRpDg------WGLLEVKSSGGVKD 123 
WP_012725295  157 HALLQMAAYADQLLAEGVQVEPT------MSLHH--GSGE-RTQHDL---ADVLEVYR-------HERRLLEALLDAHHA 217 
ARU40982      108 NHVKDAIFQYHVLNRSGLSIERVelifvaQETPMieGSRVq----DLfvpLDVTDICRrespelpEAVNELLAVIESGEA 183 
WP_011813233  124 VFQLDVAIQYWILTGAGIPVRDAglllidRDYVYp-GGAHdp--qEFfrfEPLTRTCEhwlewieAQAVSFQEVAARTTP 200 
WP_081430059   96 KYLLEAAFHGYVFSSNGYII---------SQVIV--ESPYfRASIDW---KEGIPHLF-------SVIENI--VYSQMDD 152 
WP_013218350  141 EHTVDVAFQKHVAVAYGLPVNRCrlthlnRDFVK--NGDIdp--nDLfivTDITDEVSelsggiaDSVEDMLNTISG-NC 215 
WP_013505043  122 YHLEDAAIQAWVCQQAGLPVKRTqlahinKTFVY--PGKQqy--dGLftfADITKDTDallkqvpHWTKAAFATLNEKSE 197 
WP_013248296  141 THVEDLTIQSYVLEGTGLALADIclmhvnTQYVFd-GLELdl--gQLftiRSLNETIRprlpevpSRLASMHEMLNAMSA 217 
WP_068616614  128 VHIIDCAIQYWVLRGQGVELSSIsighinNQFVY--QGDGny--dGLiteVDVTERVLerlhevpELIAKGRAALSG-GV 202 
WP_108080404  128 YHRDDAAVQSFVARSSGVPLTKIalahinSDWVY--PGNEdy--dGLlleNDLTDEVFgrgeevrSWIAEAQRIVAKKRE 203 
WP_114912702  124 HHLDDIALQAHVLEAAGVLLSAIevlhvnTAYVRg-PGAIdw--pAFfarVDVSDDLAarmsevpHRLAAMRDSLGRETL 200 
WP_012725295  218 RGVpaSWLEWRgdvdppelaalgldalsRRACGRCDYCAREVE-RHRDTRLISGIRAAQRA-RLQEVGIFTLDELAGSSG 295 
ARU40982      184 EQI--RAGRHC-----------------EATCPYLGHCFGDL--ADDDLLFAPSLDKRKYQ-SLVDRGIYRMSEVPADEE 241 
WP_011813233  201 PQI--EIGQQCf---------------sPYPCPFYNHCSADREwPEHPIEELPYLAGERYQ-GLLERGVTTIDAIPDDYP 262 
WP_081430059  153 PPV--PKPVSQ-----------------CKTCRHVLECTKILV-KEGSLLAIHGLNSKLKM-KLIEQGVTDLPDILSKDI 211 
WP_013218350  216 PDP--FISRACn---------------yPHICPLKPECWQVL--PEHPVTSL-YRGGEKTD-ELLRMGVTGITDIPAGFS 274 
WP_013505043  198 PII--EPGKHCk---------------ePFECPYVEHCAHEYKaAKYPPEDL-GNQGNTIN-RLREQGYTDLRKVPKALL 258 
WP_013248296  218 PAL--APDEHCh---------------sPYECPFWAHCTQEK--PPRWIYHLPGSS-KTVI-QLRELGVETIDDIPDHVA 276 
WP_068616614  203 PDV--AVGAHCs---------------sPYDCPFQSHCWPMD--TEYPLTGLRGGK-DKLG-ALVAAGYRDIRDLGPATD 261 
WP_108080404  204 PSV--ATGKHCs---------------nPYECGFLAYCQSQEPqAKQPIRWLPGRLSNGLQaHIETHGLTELRDVPDELL 266 
WP_114912702  201 PHA--EPGKQCs---------------nPYACQFWDRCTADK--PTDWVRYMPRLTAAQAD-RLDALGVTAISDIPSDFP 260 
WP_012725295  296 PvlgTSD-AVL-ARLRRQAA-MQVGQLERmadaeaagllvvdgarveapdgaqaperalflplvraeVVDAaALRALPEP 372 
ARU40982      242 L---SNK-AEFvRRALGSGRvPWVAPDLGr------------------------------------------RLAAVKYP 275 
WP_011813233  263 L---TVA-QKRiRDAVAKGH-PWTDPDLGe------------------------------------------AVQGVEWP 295 
WP_081430059  212 Dy--ISI-DTV-EKLRKKVT-ALLEDKVL--------------------------------------VISQ-------YD 241 
WP_013218350  275 L---NEK-QSIqLECVRTGRdHRNRPELRd------------------------------------------FLKSLPYP 308 
WP_013505043  259 G---NNKkHLRiWRACRSGK-AELDPAAGe------------------------------------------HLRSLAYP 292 
WP_013248296  277 L---TPV-----QRRVKDNR-EWIGQGLRs------------------------------------------ALEKIVYP 305 
WP_068616614  262 e--lSSV-QKRiYRVTCTGE-AEVRDGARk------------------------------------------AIAALGFP 295 
WP_108080404  267 ----NDK-QQRvKAVTLSGK-PYFDQRATv-----------------------------------------aTLAAHKLP 299 
WP_114912702  261 L---AGK-QAIiRDAIASGQ-PYVAPDLAr------------------------------------------LLHRFGPP 293 
WP_012725295  373 D-AGDIYFDFE-GDPMWttsg--amegGLEYLFGLIEEPVTgghpahaldrapegSGERYVAFWAHDRAEEKQALVD-FL 447 
ARU40982      276 A----VFLDFEtASPLFpvnpgmkggeLVVFQFSAHVLSEPg-------------GDAAHFEFVDLESDDPHAGLVEaLT 338 
WP_011813233  296 L----FFLDFEtAQPALprypgtspfqALPFQFSCHIQRAPg-------------VAPEHTDFLATADTDPRRPLAEaLL 358 
WP_081430059  242 RlEEGVFLDIE-SHPLK----------DFDYLFGVLVDD-------------------KYIPYLCESIEDEYRVFGE-LL 290 
WP_013218350  309 H----YYLDFEtFNTAIplfdgtrpyqQVPFQFSLHTAAAPe-------------APLEHRGFLYRGQGDPRPEFISaLR 371 
WP_013505043  293 R----YFLDFEtIQFIVptwkgtrpyqQIPFQWSCHKAGKN--------------GTVSHTEFLDISGKDPSKPFLEtLT 354 
WP_013248296  306 V----HHLDFEtFMPAVpkfvgtrpyqVIPTQWSNHIEYPD--------------GRLDHAEYLCRDGRDPREELAVtLL 367 
WP_068616614  296 R----YYLDFEtIAPAVpiwagtrpyaAAAVQWSCHIEEAD--------------GVIRHEEFLDLSGEPPMRPLAEsLI 357 
WP_108080404  300 A----YFLDFEtIQFAVpiwkgtrpyqQIPFQFSIHRLSRT--------------GKIEQQAFLDLSGADPSKAFAEaLI 361 
WP_114912702  294 A----CYLDFEaMMPPIplyegtrpyqTLPFQWSLHVLAAD--------------GTLSHQAFLAGTDGDPRRAFAEtLI 355 
WP_012725295  448 AYVaqrraQHPGMHVYHY-A-NYEKTALRRLAER-HLVGADEVEELITsgVLVDLYPIVKN-SAVVSQGSYS--IKKLEP 521 
ARU40982      339 PVL------AGAGSVIHY-S-AFEKRCLTRLVGAgVPGAQELLQKFLA--SSVDMEDFFKD-GVYHPKFRGKssIKVVLP 407 
WP_011813233  359 NAL------GDRGSIVVY-S-SFERRVLGELADA-LPDLAEPLAALQE--RLWDLLRVLRN-HYYHPAFKGSysIKRVLP 426 
WP_081430059  291 DFL-----DRTSGPIYHY-C-PYEPSRFSSLVNR-WSDLGTVYRKIKT--RFVDVYQILVK-HIALPLFTYS--LKSVAR 357 
WP_013218350  372 EAL------GDGGRIIVY-NqSFEQDILERLADA-FPEYREWVADVID--RMADLLVPFRAfHYYHPNQRGSasLKNVLP 441 
WP_013505043  355 PAL------GKRGPIFVY-S-HFERDRLKALAIR-FPKYATDIEAILE--RMVDLLPLSRA-HYYHPAMHGSwsIKAVLP 422 
WP_013248296  368 DSL------GGEGSICVY-S-SYERSVLERLAED-FPSLRKDLKRVMA--RLWDLHIVIRD-HYYHPAFEGSysIKAVLP 435 
WP_068616614  358 SCL------GTDGPVLMY-T-SYERTVINGLARL-FPDLAAALRAIAD--RLVDLYPIVRN-HYYHPKMLGSwsIKAVLP 425 
WP_108080404  362 AAC------GERGPIFVYnA-GFETARIRELSER-FSLLAKQLLALNE--RVVDLLPVARD-HYYHPSQQGSwsIKAVLP 430 
WP_114912702  356 AAL-----DGSDLPIVVY-S-AYERTQLKALAAQ-FPDLAGPITAIIN--RLADLLPVVRG-AVYFPDFSFSnsIKAVAP 424 
WP_012725295  522 LYMGa-ELRDsGGvTSGGDSVIQYASATLLRADGdepgfaeIMESIADYNRYDCVSTRRLTLWLRERAA-------EHG 592 
ARU40982      408 VMVPglDYSDlq-vKNGGMAEMSYVAARSGELVGadl--aaRREALLRYCERDTFAMVKLFEALLGLV----------- 472 
WP_011813233  427 VLVQdlDYTAle-vADGQAAAQAWIQMLDTDCDEer---drLAQALREYCFTDTLAMVRLREALLRAAgel-------- 493 
WP_081430059  358 FLGY--QWR--TN-LDGLRASRYYQLWLSTRDQE-------YLDILLEYNEDDTRATKLVVEKLNYFRN-------QKV 417 
WP_013218350  442 AVTGt-GYDGln-iANGQVASIRYFNAVYGNKNEam---aeLFADLEEYCGQDTEGMAWIMDRLKILAEdeptstnDMA 515 
WP_013505043  423 TIAPelDYSAlEGvQDGGEAQQAYLETIHRQTTGerk--teLQQAMLAYCKLDTEALVKLVEYFEGh------------ 487 
WP_013248296  436 AVVPslSYADla-iGDGGVAACEYARMIFTVSDWiek--sqIEEALLRYCERDTLAMVELRRELKKRAg---------- 501 
WP_068616614  426 AMVPemSYAGlEGiNEGMGAADGFLEAINPATDSark--qaLEEQLLRYCRFDTEAMVEIVRVLAAEA----------- 491 
WP_108080404  431 ALCPdlHYGDlDGvQDGGMAMNAFLEALAPQTSKtrk--teIEQQLLAYCALDTYAMVRLWAAFSGTSlkv-------- 499 
WP_114912702  425 ALSPgfGYDDlADiADGVAASAAFAQMASGAIVDpae-varLRGALLAYCQRDTLAMVEVHRALVQLLQswpsgsp--- 499 
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