Conserved Protein Domain Family
PRI2

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COG2219: PRI2 
Eukaryotic-type DNA primase, large subunit [Replication, recombination and repair]
Statistics
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PSSM-Id: 441821
Aligned: 62 rows
Threshold Bit Score: 283.741
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014557101   1 MDSR----------HARYPF----FEAAQVAVRDA--DV--SP--ASLI----TADA--PAVDRGHERVKR----ALLs- 49 
WP_128621500   6 SSREl---------ACYFPF----LNKSSSYLSKR--GF--VL--DIVL----QDK---SLIERSIARLRK----SLSre 55 
WP_010916815   1 ---------------mRFPPl--lFFQDSEAVK--------RI--ANSVrgtkDDDA--EIKDHSMRFIRN----AIS-- 45 
WP_011998114   1 ------------mlYARYPF----VGSVSKLSKRMf-GVemDV--EELL----------DLYPNAIDLAKA----MVE-- 45 
WP_012608565   2 AHID----------LIKYPF----VAGPSDFSPSRf-GLprDTdsSTIIs---------IIIRGALDRLREifplVLTdi 57 
WP_013142709   4 TIID----------YRNYPF----LADLNDTLNYRwpGL--KL--SDII----SLPNn-YPRLRAKVLLKS----IVSk- 55 
WP_013336405   1 MTLVlrcfndfvsfIVKYPFskegLTRFREITSER--GI--YI--NDLA----NSVVgrQLLQRAYEILSE----AILk- 65 
WP_009887442   1 -------------mITSNFFvdfkLIENVDAID----GIv-----NSLV----PENR--SSVREAFEYLNG----VVRky 48 
WP_052883186   6 TMQEi---------ACLFPY----LDKSGEYLFAR--GI--TL--ESAL----NSD---HIVKRAIDIVEE----SLKr- 54 
WP_103286390   5 SSRL----------LARYPF----VEDAGNYLKLL--DY--RL--EEFD-----DPAmsSVIDRATARVIA----AIR-- 53 
WP_014557101  50 -GT---VNSETpRRW--STRT---EVLSYPIARILVSVIDVPAAIDKYARAEAATAQERLQtd--iVEDHdidqlqstqS 118
WP_128621500  56 pYN---LRLCL---D--SPEE---EAVAARLALYIAAATKNNYILKRFADSESKNFSETLRkt-pgIQNL---------N 114
WP_010916815  46 -GD-----------Q--QKEIlnvDMLRY-IAWVLVAL-NENIVTARTVIRERDAVEDALK-----NQQP---------E 95 
WP_011998114  46 -GR---GPAED---AgcDDLC---AVLAYRIALVLVAAARSNWLRNNFAVNVAKRASEFFK-----KEGI---------E 101
WP_012608565  58 lSErmrVNTKIf----mDEYE---SIACYKLLLAVAKSIGDRKLINRIALAYAKSARRSLF-----KEDD---------S 116
WP_013142709  56 -RK---ILPPK---S--TSED---EVLAFYTLISIVKLLKDKKLASMVAVTYAKYAYRYLQ-----NEPI---------N 109
WP_013336405  66 -NS---ITDDP---D--LGED---ELLAHYIAIVLAAHL-DKSLWRRFADVESKRFSGKLA-----LEDP---------D 118
WP_009887442  49 aDN-----------EgyNITM---GKNAFAIAMWMLRYINEPGMTSRFAITQRDVFERELNri--sKEDN---------E 103
WP_052883186  55 -MK---NRPCV---D--EPEV---EAAASRLALYIITGASNIYLLRRFADSQSKMFTYRLRnt-pgIQSY---------E 112
WP_103286390  54 -GI---VYDPD-KVA--SVDE---EVVSFILACIMVKASKVKALYRRFALSEARRAEVFLVddlrmNASR---------D 114
WP_014557101 119 qsiSFEA-VLTE-FGLDSSVYsaqsdeapsvieqrkeldstliqhtdTDGYWIELGAYLSLADR--EWGQSWRLTAREVT 194
WP_128621500 115 ---CKIE-IGKD-LGIIAKPAqdvvtg--------------iinaafKTPVAIKWTSYLRYAPP----DPFWAMINRVVV 171
WP_010916815  96 ---DIEN-FADD-LKINMKYNr------------------------dLERFEIGVFDFVKYASR--VTGSQYRLSNQSVI 144
WP_011998114 102 ---TVVG-VLKA-CGFWAEVLreplrvplr--------qqrgavyaeEYLVRTTLMDYVRLAKRf-LSDPTWKVVNKALL 167
WP_012608565 117 ---VILS-IASK-IGLHLVYVenppalpvftnnv-gggknrargaflPLNYSLPVIEFTGIVAErlSQDPAYSLENNVVS 190
WP_013142709 110 ---TLLK-ISSI-LGLKAEIPrnyplipid--------vkrnkpifePRPIGIDLKDYLKLTAKrlARDPKYSLVNQIVY 176
WP_013336405 119 ---CVIY-IAKE-FGINVMRLrdldiy--------------deslalAFDVGVRVWDYLRFMPK--N-DPYWKLVNRYLL 176
WP_009887442 104 ---NIIF-YCDS-AGIEATVD--------------------------GNTFHIPFDFFIKNNKK--ISGYKYRLVYQKLS 150
WP_052883186 113 ---CKAE-IASD-LGLSVAMArnvvkg---------------sllaaTYPIAIRWRDYIRYAPQ----DPDWAMINRPVV 168
WP_103286390 115 emgNILNnIFKGlFAIDVIYNh------------------------dHSTFMIKVEDYLKYSTN--FHDEYWRLSNRILH 168
WP_014557101 195 DGMVYVDVSDIFTLIESAIEDRVAAGLPF-D-VqgsdgG--DVI--VDALTDA---VSDLRELVSD----NSAAdr---v 258
WP_128621500 172 KGWVILPLDDFERILEEAYEEQILRIASEnE-La------vGRV--SASIDMSl--IEDLLRKYAQr------------p 228
WP_010916815 145 KGIVYCQKDVAIKILRESFVSNMFKVIDSiD-------Q--TTA--SPVLSDQ---TDSINELREF----YKKSvy---a 203
WP_011998114 168 GGFVYLKEEELRRLAEEAVVIKVLEDLRElGdVd----P--QAL--PERFKGV---LEELKTKYMA----KRSSa----- 227
WP_012608565 191 EGKVYMNKRMILRILEEAVIKHIITDAASmD-I--------SSL--NIPLQDF---IDKAREKLVDagwfKSITargtme 256
WP_013142709 177 RGKVFLNKKVFSRILEEAIYYKILSIIENiE-Vk---eNkfQEL--LEEAKKV---LDEVGWLQKRm---LDIEv----e 240
WP_013336405 177 KGWVLMTYKDLVRLVEEAVEKKVLELISKaH----------ENLdeTKPLIDA---LGGMKELMEY----RSg------f 233
WP_009887442 151 RGTIYLSKNQFIHLLREDFVQKLMDVYSRmG-------P--GDS--QNIFRKFigdLEKIKKDFLE----IKSKn----- 210
WP_052883186 169 SGWVLLDVNDFERVLEDAYEAKILKMASReD-V--------GYI--VGLLSK----VEPIYREIAK----LRSLr----- 224
WP_103286390 169 KGYVHLNTKDMVRLIRDEIYALIIRRLERiN-Ve------yDHL--PEALKRR---VDALKGMMLE----IYELs----- 227
WP_014557101 259 GAGVDFVAPSQFPPCMQTLVNKARSGEELANHAEFALVSFLVAMDAD---------VETILTILEYDQDNQDektavaeg 329
WP_128621500 229 VNITKLSTEGPDPPCMKAILDALKAGENLPHAARFAIATYLLHKGWE---------VEQIVDLFRTSPDFNE-------- 291
WP_010916815 204 KLTIGRGNTKAFPPCMKEIIRNLHEGINVPHMGRLAIASFLHKVGYT---------EDEIVEYFRNAPDFDE-------- 266
WP_011998114 228 DIKIKGFEPRALPPCVRSIYERALQGDNLSHQERFTLATFLLNVGKD---------VEDVLEVFKNMPDYNE-------- 290
WP_012608565 257 TSEVGGLITEALPPCISRIISIVESGGNPSHEERFNLAAFLANIGLD---------VDSILEYFRKTPDFNE-------- 319
WP_013142709 241 KNTEGVIDFEAFPPCMKLLLNRLRSGENLGHHERFTIAAFLARIGMD---------VDSMLEFFKNAPDYNE-------- 303
WP_013336405 234 TTKVKVQITGLTPPCMEAIINEIKSGGNPSHQARFAVAAYMLRRCHDlegkpiedcVEDVVNLFKTVADFDE-------- 305
WP_009887442 211 TISLGEVDFTMFPPCIKTYITQMRDGENLAHLARFTLASFLHSAGMS---------NENMLNLFKFAPDYKE-------- 273
WP_052883186 225 PVTIRAEGRGEDPPCMRAIIESIRKGENAPHTARFAITTYLLRRGWD---------VEQIVDLFRSSPDFNE-------- 287
WP_103286390 228 NNNVYATERRGYPPCILNILKVLEQGNNPSHTARVLLATYMLGIGKS---------VEEVCELFKNAPDYNA-------- 290
WP_014557101 330 vhtdteetttttrERIETRVRYLNDrqGAGTQYPPPSCATMQAYGDCT-DPDERCA--EITDPVSYYIEAIDAVDN-P-- 403
WP_128621500 292 -------------KITRYQVQHIAGqvGGRKEYAVPNCETMNSWGLC--PTNLGCG---VKNPLQYGRRVAIKKSN---- 349
WP_010916815 267 -------------SITRYQIKHLSGe-ISGVEYSPPKCETMRSNHLCFmDDDKLCHqdWMKHPLTYYEVKSRRLG----- 327
WP_011998114 291 -------------RIARYQVEHLAGlrGSHKKYSPPSCKTLVSWGLC--PGKDECK---GDHPLKEYWRRLRRLTK-Aps 351
WP_012608565 320 -------------KIARYQVEHISGmkGSRKKYMPYSCEKMKSTNIC--PISDRCK--GGRNPLSVYRYNLKRGLK-Rer 381
WP_013142709 304 -------------KIARYQLEHIAGlrGSRKKYLPYSCESMKALNLC--PISGQCK--GGKNPLAVYKYNVRMKYL-Kkt 365
WP_013336405 306 -------------KKTRYQVEHIAGlrGGRKFYMPPSCHEMNSLGLC--PTNLGCG---VKSPLQYTAKAIKKYQSmQq- 366
WP_009887442 274 -------------DLATYQVNHITGv-ISGTEYSPPKCSTLRSNHLCYmGDDPLCA--RIKHPMQYYEAKKKSSGNyRkk 337
WP_052883186 288 -------------KITRYQVQHIAGqvGGRKEYSVPSCETMNSWGLC--PTNLGCG---VKNPVQYGRRASRATEAsrpq 349
WP_103286390 291 -------------RITRYQVEHLAGlrGNRVRYSCPSCSKVKSQGLC--FKSDECN--GIINPLQFGRYSRSAGRK-Ktm 352
WP_014557101 404 --------------SEYAGGH 410
WP_128621500     ---------------------    
WP_010916815     ---------------------    
WP_011998114 352 reprp---------------- 356
WP_012608565     ---------------------    
WP_013142709 366 -------------sKETRTKQ 373
WP_013336405 367 -------------aQG----- 369
WP_009887442     ---------------------    
WP_052883186     ---------------------    
WP_103286390 353 dveggvrederldgSKSKSES 373
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