Conserved Protein Domain Family
GAF

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COG2203: GAF 
GAF domain [Signal transduction mechanisms]
Statistics
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PSSM-Id: 441805
Aligned: 829 rows
Threshold Bit Score: 44.4141
Created: 9-Feb-2022
Updated: 24-Feb-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015182749  230 YLRETLPLYEVEFRMRSKSGQWKWILIHGKVFERDESGAPVRMLGTQKDISDRKLAQERLRHSEANLATAQKIAHIGNWE 309 
WP_095068542    1 ---------------------------------------------------------------------------MSPKH 5   
WP_012865615    6 RSTTERDAAHELAEARQNTAAVTAVVDALARSREKQDAVQRVLDVVREQFGWAYGSYWRIADDRPELEFAQESGTVGEEF 85  
WP_011981445    6 VRRAQEEAAATTAESRANIAAIGAVITALGAATTSTQAVEIALDEVRARFGWAYASYWKLDPAAGVLRFQQESGDAGEEF 85  
WP_015801567    9 RSADVPDVRATVAEAQENAAAVTAVVKALDGATTSAQAVKVALDAVRRQFGWVYGSYWRIDKAGRTLRFAVESGDAGEEF 88  
WP_012085518      --------------------------------------------------------------------------------     
WP_083804429    1 ---------------------------------------------------------------------MRGAPPMLLPL 11  
WP_025410813    1 -------------------------------------------MPAPPTAPLDTPDPDPSGSDAGATARDRFDAVSRASP 37  
WP_013456745    1 ----------------------------------------MRTFEVQRRLIGTLLEPLPLEERLARALAQLCRNPWPGLA 40  
NP_627986       1 ----------------------------------------------MRTGEPLPEVGDVLAALATGLWHWDTATGEVTVD 34  
WP_015182749  310 FDVVSGEITWSEEKFRILGLDPTQPEPQYAELLEKIHPDDRKLFQQATSQALAFGTGYELDYRVVRPDGQVRYIEGRGEA 389 
WP_095068542    6 GSSRVTPTAWPLALAIGAAVTAHIDQTAPKIIGSTTTKSTPDRETRPKENITEPTYPPHINSVPLPQYPSEDNHHDRKDL 85  
WP_012865615   86 RAVTATASFREGVGLSGRAWKSRDLVVVEDLGELRDCVRAPAAQRVGVRSGICFPLSEDGQVAGTMDFFATEVLDLSPQR 165 
WP_011981445   86 RRVTLAASFAEGVGLSGRAWRTRDLVFVPDLAEVADCVRAPAAQRVGVKSGICFPLLADGRVVGTMDFFTTETLDPSPER 165 
WP_015801567   89 RAVTREASFAEGVGLSGRAWRTRGLVFVEDLGTVKDCVRAPAAQRVGVKSGICFPLMAKGRVVGTMDFFTLEHLTPSEQR 168 
WP_012085518      --------------------------------------------------------------------------------     
WP_083804429   12 TSLALATYILAFPLLYRQAGVEAASFSSVWLAMAGWSLGPWGGLAAGLANIPLHLALFTWVHDPSINALQEAAGLESILS 91  
WP_025410813   38 VGIFHADLNGTVTYVNPRLQAIAGLGEDDLRGRRWLRFVHPDDVPTLLRGWTAANAARREYEHEFRALLPDGRVRWLHGR 117 
WP_013456745   41 PRAAVFLQEGGRLRLAAAYGLEPEERARCDAAGPGSCACGPDPESGARQGHATFPIPAGNAPVGVLHLCLAPGEELGAAT 120 
NP_627986      35 GEAARLLGLPTGPATLTEAQVRARLHPVDWNEITGVVQLAVAEGTLAEVRIRIMDERGHVVRVVRSRSKPSFDTVRKAYV 114 
WP_015182749  390 VVNEQGQVIRLFGTALDITDRKRVEEALqesvQR-E-RAIARAIQR-MRQTLDIEAIFSATTEELR-QLMNCDRVLIYRF 465 
WP_095068542   86 KEPLPERGRMRALFNKPPQVTENPPPQD----DE-I-AVLRTVMTA-LATSHGYEQAACAAINAAC-CALGWDLSSVWRV 157 
WP_012865615  166 VETLRSIGVLVSQALERVVVAERQALDK----QD-V-DAVSSVLRH-VSVAQTRSEALDGALDSIR-ADFGWDYGSVWQV 237 
WP_011981445  166 LDTLRAIGALVSQARERIAATERTTASV----QD-A-EALAVVLQE-VSTAATRTEALGRALDAIR-TGFGWAYASYWKL 237 
WP_015801567  169 LDALRSIGLLVSQALERVTDSEVQAAAA----LD-L-QAVNTVLRG-LGSATSEEEATRQALETVR-SEFGWAYGSYWAV 240 
WP_012085518    1 -------------------------mtspstgPA-L-EHLHRTATE-LAAALEVRDVVTAVLRTGR-DVLRTSTCGVALF 51  
WP_083804429   92 PLLGFAAGTLRNLLDERTRTLAALRRRE-----RtL-RLLSAVNHA-TSHANTQEELIRIIPQVMVlEg-GYRAAWAAHA 163 
WP_025410813  118 SAVVCDAAGTPVQTVGTVEDVTARHVAV----EK-M-RGLLAISEA-LARALGAGDVVRAVAEHAV-PVVGARSAIVMLL 189 
WP_013456745  121 RGFLEETARLVGLVVRHEQTARAHRRAD-----R-ArRVLLRALEAaLG-AESWSGFARSLTETLV-DAGGYPLAAVWTr 192 
NP_627986     115 LTGTLQEVAEPRPGTPAGRSAVTGEWRR----SR-E-AFLLDAGRA-LAEARSTEEVLRVAAGLSM-PGFSP--DGLAVF 184 
WP_015182749  466 NPDWSgEiVsEsVG-SEWI-SLL-----QeqVHhphlaqktleddrcavkkfdsaagresvlshacPvqD-TyLqetqgG 537 
WP_095068542  158 DHDTNk--L-ImDG-SshrdPSIep-ppGekLTl-------------------------------aK--GeG-Vl---gR 195 
WP_012865615  238 DEAAQv--L-RfGReSGSVnEEFravtrsasFAe-----------------------------------GvG-Va---gR 275 
WP_011981445  238 DPAAGv--L-RfQQeSGDAgEEFrrvtlaasFAe-----------------------------------GvG-Ls---gR 275 
WP_015801567  241 DPTGQe--L-RfVTeSGDAgEEFrkitreasFRe-----------------------------------GvG-La---gR 278 
WP_012085518   52 DEAHR-V-LvPqVPvEGDLtG-Lgt-grP--VP---------------------------------L--SsAtPs---aE 87  
WP_083804429  164 EPDGR---L-EpLAwAGEGaEA---------LA--------------------------------------PcLa----a 188 
WP_025410813  190 SEDAE-A-L-ElVGeEGTGaE-Sad-wrR--VP---------------------------------L--TmHvPa---aD 224 
WP_013456745  193 -GRGA-A-L-DfVAgAGDAlEyArs----ikVTldd----------------------------apT--GrG-Pg---gR 230 
NP_627986     185 GVSGD-R-L-TvIGhHGQPeNEAnp-fvD--MS---------------------------------L--EtDyPa---aE 220 
WP_015182749  538 AYSQG-ASYaV-VQDIYQA--Gfhdc---yinlLEQFQARAY-IIVPIFC-GSKLWGLLATYQnSGsRQWKTTETNVVVE 608 
WP_095068542  196 AWERR-EII-I-EENGa----Tilrh-----ffgPSAPLGAThIGLPISH-QGRIYGVLSFFA-YTpWIITERRIELLTC 261 
WP_012865615  276 AWRTR-DLV-F-VSDLAEVt-Dcvr-----apaAQRAGVKSG-VCLPILV-RGRVVGTMDFFS-TStLVLSRGRQEALRN 343 
WP_011981445  276 AWRTR-DLV-F-VPDLAEVa-Dcvr-----apaAQRVGVKSG-ICFPVLV-SGQVVGTMDFFA-TTtLVLSDSREHALRN 343 
WP_015801567  279 TWKAR-EML-F-VRDLADMt-Dcvr-----apaARRAGVKSG-VCLPLVV-HDVVIGTMDFFT-LEeVELSDSRENSLRN 346 
WP_012085518   88 AARTL-RPV-L-LRDRAELaaRfgagpgglndsVLAQGEHSW-AMYPLRA-RGRLLGVLRFGF-TReGSLDEDEQVFAAT 161 
WP_083804429  189 SW-EGpRPTcLrLADp-----Glrah----retAERYGVRAV-LLLPVTV-SGRPWGCLAVAS-AQpAAFSPDEQAALQE 255 
WP_025410813  225 AMRDG-GPV-T-LASPDEMaaRyphv----ahvWQALGARAL-ATFALEA-EGRRFGAIAFRF-PHpRVFRDSELAFLRA 294 
WP_013456745  231 ALKEG-RPV-V-LQNALEDp-Tfapw----rptAERYGLRAN-AAFPF-AvEGRPVGVLSVYA-GEaDAFEGEELEMLER 299 
NP_627986     221 VVRTG-RAV-Y-LSSPQQYrsRypmt----wslAERFGRRSW-AYLPLTV-AGRTMGAWMAAF-AYpVAFTPDERSVLTT 290 
WP_015182749  609 IGNQLGVALQQAE------------------LLAKVQKQSEALQQSTQRERDKATQLKLTLEELRHTQSQLIQTEKMSSL 670 
WP_095068542  262 IGDLLSTALERIRysais---------qeqaQSANAVNSVLREVTQTAEESTAIQVALDTIRREFNWEYGSFWGLDEKEN 332 
WP_012865615  344 TAFLVGQALERVEaasrltdagnelvvsieeVERNVLSASAVATESLVLTERANVEVTRLGESSEQIGSVVSTIGRIAAQ 423 
WP_011981445  344 TALLLGQALERFGsa---------------dKLASAGQELVASIGEVERNVVSATSVVARGQELTQEANRRVSELGESSS 408 
WP_015801567  347 TAFLVSQSLERIRettri---------ssagAELVTSIEEVERNVVQATGVAAEAATLTSDANQAVDRLAQSSNEVGDVV 417 
WP_012085518  162 LAGQCALALERARllhda---------rrseLRYRTLAEAGSLDVFTARPGEGVTSDLPGWSALTGRADVRGYGWKADIH 232 
WP_083804429  256 VAQAFGASLERVAaleal--------arhavTDPLTGLLNRRGLEEKGRALLAALQTRNEPAALIFLDLDRFKEVNDTLG 327 
WP_025410813  295 VVNQCAVSLERARlfdear-------aareaAFEASRAKSEFLARMSHELRTPLNAIAGHLQLIEMGLHGPVTTAQHDAL 367 
WP_013456745  300 VAQLLGEVKVRLEtge-------------rlELFRAVIEQIPESILITDTEGRIEFANRTFVAETGYALEEVLGRNPRIL 366 
NP_627986     291 VARMLA-------------------------QALSRAGAAENQRELAEGLQRSMLPMLGPEIPGMDIAARYVPTGGGLQV 345 
WP_015182749  671 GQMVAGVAHEINNPVCFILGNLAPAKEYFQDALRLIQLYQETYPNPTPAIQELAYEIDLQFLREDWSKLMHSMQVGAERI 750 
WP_095068542  333 VLRFVIESGDAGEEFRQVTHNSTFAKGVGVAGRTWASNNLVYEPDLGQVTDCVRAPAAQRAGVRSGVCLPIVVDNKVVGT 412 
WP_012865615  424 TNLLALNAAIEAARAGEAGRGFAVVANEVKDLAVETARATSDVEGRISAIQQLVDDVVGSLVSIGSSVERINETQTTIGG 503 
WP_011981445  409 RISAVVKTIQAIAAQTNLLALNATIEAARAGETGRGFAVVADEVKELAMETATATKDVDERVRAIQEQVEHVVGALGQIS 488 
WP_015801567  418 KVINNIAEQTNLLALNAAIEAARAGEAGKGFAVVANEVKELAQGTARATEDVARLISAIQSDAGSVVTSLAAIGQIVDRI 497 
WP_012085518  233 PEDLPAVLDAVATGVAQRSAVRHRFRLATPGGWRTISLVAVPVLADPADPGSEVVEWVGSLDDVTDRARAARRTRTLRAL 312 
WP_083804429  328 HTAGDQALIEVAHRLKATARRTDLTARVGGDEFALLLPGADATTAQQVARRLQKALEAPVELEGRAFILGASLGVARFPE 407 
WP_025410813  368 ARVGRAQRHLLGLINDVLNFTRLESGRVEYQLTPLRVSDVLLDVQPMVEPQLAAKRLAFDVQLPEDDGSPPLLVWGDREK 447 
WP_013456745  367 KSNRHSPSFYRSLWQALKAGRTFRATFVNRRKTGELYPSDRLIAPVRARGKEYYVAFGRDTGAEERTKAELTAVLDALPQ 446 
NP_627986     346 GGDWYDMIPLPGGRFALVIGDVQGHDVRAAGLMGQLRIALRAYASEGHRPDAVLARASHFFHGLATAEDDPGDLRFATCY 425 
WP_015182749  751 EAIVRSLKTFSRLNESELKPVDIHEGIDNTLLILQSRLRAEGDRPEIKVIKDYGSLPKVTCYASQLNQVFMNLIDNAIDA 830 
WP_095068542  413 MDFFATRTIDLTDTRREALRNTAFLVSHAVERIRGTQRISEAATHLLDSIAEVEKEVHSARTIADEAARITTDAGRIIKE 492 
WP_012865615  504 VLTEQAAVTRAILG------------------------------------------------------------------ 517 
WP_011981445  489 EVVEEIDRTQAVISGVLTEQTAVTRAILG--------------------------------------------------- 517 
WP_015801567  498 NETQTMIGGVLTEQAAVTRDIVGGR------------------------------------------------------- 522 
WP_012085518  313 ASALATATTYPQLLDGVLQVCLDGPGAVRATFALAENHGEGTGLRVHRMLTDRERRTHALPGLGLDDLDVLAGPEGTYLV 392 
WP_083804429  408 DAQDLDGLIRAADVAMYAAKHSPAPLVFFNATQDQAFREQVRLEHELRQALAAHQIQVHLQPILDLRTGETVLFEALARW 487 
WP_025410813  448 LVQVLLNLLTNAAKFTPEGGSVALRLGPSDGAPDRATITVRDTGVGVPRDRLEAIFDPFVQVNASLTREHQGSGLGLAIS 527 
WP_013456745  447 PVIMVDLAGRLLRFNRAAARVFELKDEHRGRPVPLLHPQGPEGFLKRLEQLRRGGEVPPLHFQWQGRSFRVHPQPVRGLG 526 
NP_627986     426 YAEVDPATGTVESARAGHLDPVVRMADGTALILATAGGLPLGIDPDTDYPTTRLALEPGDTLMLCTDGLVETGGHDLQSG 505 
WP_015182749  831 LENQPSPRVITIHTSLMGGDSGTRKGGNLTHPLRKNSPNSQALSSNNQWVMIRITDNGSGMHKEV 895 
WP_095068542  493 LDTSSTEIGAVVKTITAIAEQTNLLALNATIEAARAGEAGKGFAVVASEVKELAHETSGATDEVN 557 
WP_012865615      -----------------------------------------------------------------     
WP_011981445      -----------------------------------------------------------------     
WP_015801567      -----------------------------------------------------------------     
WP_012085518  393 GPDGVESVPEVFRGFFEAAREAGETAWAVLPLTTRRRRLGSLTLGFTDPGIDDEEEREFLLAFAR 457 
WP_083804429  488 KVSPAVFAPLAEAAGFAETLDRQVLAKALAHLKALRDAGFPGGVTVNLSPQSFANLMLPDWIRAQ 552 
WP_025410813  528 RDLARGMGGDITVESALGSGSTFTVHLRRSVLDDGTTTDRRSHSTRRHGHERRSGVDRRQQD--- 589 
WP_013456745  527 QEPAGVVAVFVDVTDLEKEAAFRHALLRLMQHVVEAEDPYKLVLDFALEQVPGADAGSLMIREES 591 
NP_627986     506 WHRLRVILEEHVGGLEELADALVQAVHGPSSHHTVGPLADRREDDIALLLLCRQGEGCGCGESTA 570 
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