1W94


Conserved Protein Domain Family
IMP4

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COG2136: IMP4 
rRNA maturation protein Rpf1, contains Brix/IMP4 (anticodon-binding) domain [Translation, ribosomal structure and biogenesis]
rRNA maturation protein Rpf1, contains Brix/IMP4 (anticodon-binding) domain is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
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PSSM-Id: 441739
Aligned: 35 rows
Threshold Bit Score: 109.32
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1W94_A         3 LLTTSRKPSQRTRSFSQRLSR-IXGWRYINRGKXSLRDVLIEA----RGPVAVVSERHGNPARITFLDErgg------er 71 
ACR42009      43 VITSSRDPSIRTRNFLNILTSlLPDSVKITRGKKSKKEIFERAinlgAIYLLFVLAKNGNPLRIIVYDLetfsi------ 116
AFH43329       9 IFSTSREPSLRVRSFLKDIISlAPWLVKVNRGKLTFKDLVDITisekSTTFVIIGEKNGNPSIMRIYDVsdylik-navl 87 
WP_011008492   8 IITTSREPSKKTLELVNDLVNsLPGTSKIVRGKKSFITLLEEAvacgARYIAFIWERRGMPFALLFYDVinrew------ 81 
WP_052290704   4 VLTTSRDASTRLRQFINELELaVPNAVKVNRGRSGLVDLALNAlemgARHIVVFNSFHGNPSSMVIYRIrens----lvk 79 
WP_013267052  22 LLTSSRRPSRRTRALIKDLESaIYGVVRFTRGHESLRDLNSIAvangFKRVVIINEWRGNPGLIVVYSPseen-----lv 96 
WP_013336065   5 VLTSSRDASIRMRQFLNELELvIPNAVKVNRGKSSIIEIAGKAlslgADRILYIGSRGGNPGFIRFLRVkegv----iev 80 
WP_014126732   5 LATSSRYYSKRVSQVLNELSTaLPGVEKVVRGKQSYKDLLEEAilrgARYILLVFSRHGNPSALRVIDVerraw------ 78 
WP_014737090   3 LVTTSHRPSQRLRSFVKDLTLvLPGSVRVTRGKRRLLDLAYLAlllkKKYLVVAANKKGNPAVIHVYVVhydaegkvaas 82 
WP_015232096  20 LLTSSRDPSTRTRTFINELSSvLPKSIKIGRGKLSLEELNQIIlrynIPKLIVINEYKGNPGKIQLFKPnensk---rpd 96 
1W94_A        72 gY---ILFNPSFEXKKp-----------eLADKAVR--VSSCPPGSEGLCNLXGL--------EVDESSSRDAWSIRTDE 127
ACR42009     117 -kyffKLHGLSLPSDYniplyq-ikrhnsVCIELNR-----CDFLRDFLVDMNi---------YNLSNNCDVIVNTRLVS 180
AFH43329      88 hAytlFIKGVTLAREAnrpssp--gyvddAIIEGSLppDEEHRNLTFALIKMFGSsi-----iPNAESSNVLKIQIKGYP 160
WP_011008492  82 kpymlKISGIKTRREFpvfisrrppaksaVIVDLSE------GEVGDIFTEIFGYpil--yslDAVRGLFDTVVLIRRTD 153
WP_052290704  80 lPyviTLTGVKLLKDIlpsrpi--lgkanTMVTVTQpgVQLALTLSEVFESQLFYgs------iDEYRSYDSIMYIRPVK 151
WP_013267052  97 eIgrlKIAGVKLRRELgrrda----gqcreVVSSSK--DETTIYITKLLADAFq---------LRATERPDTDYLEVSLD 161
WP_013336065  81 mPyliRIFGVKLLIDMpinvkgrqkarsgVVVSLGE-----YVEVTDLLSEQLGLpsmrvydfESVRGMYDVIFLIHRVE 155
WP_014126732  79 fpyelAISGVKTREDMpafvlrkpraasaAIVDYTA------SELPDILMTIFGYpllfsaelDKIKGRYDTIVLVRGSP 152
WP_014737090  83 rYfdvLLGGVRLSREGgakltt--pitsySSVDESNcsSSKCLELAGLLMSLLr---------DFINKSSAFKISLH-DE 150
WP_015232096  97 lIlyaIIYGVSLRKELgfnkkisvrdaaiKLIDEKQ--DNVKYDYINKLSTMLDLnv-----nDRLIDENNIAYFLVKFD 169
1W94_A       128 EYaWVXELXDa--RGTPAGFKLLIRDFRVGE 156
ACR42009     181 NNiCELLFTLstkNIKFLKMLLEV------- 204
AFH43329     161 NSgWMLNFKKs-gSNEYVGPRIFIGKVKKVG 190
WP_011008492 154 GY--LVELLGs--DLGPRASSIRIKKVVYRH 180
WP_052290704 152 PGcCEVSFIDg-lTYAPRGPIIRIRRFKEVN 181
WP_013267052 162 GDqVTIAPRKl-kTNAIFGPLLRVVvpdgsr 191
WP_013336065 156 NA-YEVQILNg-rDLGPYGPFMKISDVIYVK 184
WP_014126732 153 GR-YIIELIDg-sDLGPRGLILKIKAIKLIR 181
WP_014737090 151 GGnVTVKILSr--NGDVVGPVLKVRGFKTYG 179
WP_015232096 170 FPyIDIKVFN---RNVNIGPNFKLKfgddin 197
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