2B3Z,6P8C,2G6V,3ZPC


Conserved Protein Domain Family
RibD

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COG1985: RibD 
Pyrimidine reductase, riboflavin biosynthesis [Coenzyme transport and metabolism]
Pyrimidine reductase, riboflavin biosynthesis is part of the Pathway/BioSystem: Riboflavin/FAD biosynthesis
Statistics
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PSSM-Id: 441588
Aligned: 885 rows
Threshold Bit Score: 72.5005
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2B3Z_A       155 TGLPYVTLKAAASLDGKIATS----TGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLp-NVTkQP-VR 228
WP_013762549 150 QQRPYVILKMAITSNGYFAPL----DRSQFWITQTLTKRLVHRWRMESDAILVGTTTALMDDPQLDNRLy--yGkSP-LR 222
WP_039123224 146 YQTPYVFAKWAMSLDGKTTVN----AGDSRKISSDKAAIHTHQLRNICDAIIVGKNTLFEDNPKLNVRLdiNMIvHP-IK 220
WP_109324343 147 KKRPYITLKWAASLDGFIAQE----NGEPYTFSNPQSQTLVHQMRTQHQGILVGVNTIIQDNPQLNVRLw--pGnNP-IR 219
YP_170577    146 TKKPFVYAKWAMSLDGKIAVN----DGDSKKISSHQAFVNTHELRNICDAILIGKQTLIDDNPSLDVRIniNKIkHP-TR 220
WP_069126092 146 TKLPYVTLKYTSSLDGKIAAK----RGVRTNLSGSETWQDVQIEREKYQAILVGSETALVDNPSLTVRNp--qGkQGlTR 219
WP_012056136 148 KGRPYIILKWAQSEDGFIDRLrmdvSEPVTVLSSPETSRLVHKLRSEVAAIMVGTRTALLDNPSLNVRHw--sGnSP-VR 224
EHR75624     153 HRRPMVTVKMAVDCNGSVDDR----SAEAQRFTSEVCLDRVHQLRKECDAILVGAETVERDNPTLTIRRv-eTDrQP-LR 226
WP_003667954 148 YQRPWVTLKQAVSLDYRVAAE----KGQRTAITNSAVAKMVHTERGNFQGILIGSQTAIIDNPTLLTTSp--tKfPP-VR 220
WP_084274233 141 LGRPWVTLKWAQSADGFIDRErc-pGGAPARFSTALSTMLVHRLRSLHDAILVGSGTVIADNPSLTTRAw--pGrDA-TP 216
2B3Z_A       229 VILDTVLS-IPEDa--KVIcDQI-APTWIFTTARADe-EKKKRLSAFGVNIFTLe-T-E-RIQIPDVLKILAEE-GIMSV 299
WP_013762549 223 IVLDRRLQ-LPNSl--KVF-SDG-QPTLIITEREKS------INSASHLHYLSMnfGeT---FWPDLLAILWREyKLGVI 288
WP_039123224 221 IIVFTEIKeIDLNw--QIL-DQtcAKTVFVCS-NITn-LAKQTLQDLNIEFWIIpaQ-KdKICINSLLKKMADA-GITSV 293
WP_109324343 220 MVLDPHNR-IPKNs--HVL-QDG-QPTWIFTKQVEA--------EQGACHWIALg-EhY---QIKDILKFADKK-GIISI 281
YP_170577    221 FILANHLTtINHNw--RVL-DQrhAKTIFVCS-KISa-RVATKLNQLGIEYWLLpqS-QhQVCLDTLLEKMGKI-GITSL 293
WP_069126092 220 IIIDRSGR-LTGKl--MLF-TDtsQPTWVFTENS-Nl---kQRLTHQHVRLFFA----E-LWTIEQILMVIAKE-GIQSV 285
WP_012056136 225 VVLDRRLV-IPDSy--RLL-NGS-SRTLIFTEKEVE--------NRENVEYIRIdfEgP---VIRQVLDHLAVR-KLDSL 287
EHR75624     227 IVIDPNNR-IDSNa--ALL-HDGl-ETLHMTSN------------------F---------RGLEALLNQLGDR-EIQRL 273
WP_003667954 221 IVLDRRGR-LKDNptlHLL-TDgqAPTWIFTENS-SlqD---QFA-KsIQVFYRr-----TWSINDILHELGRQ-EIQSV 287
WP_084274233 217 VVADRRGR-INPVs--TCL-DTD----------------------R------LItlGvS---TPADMLAILREK-GITSV 260
2B3Z_A       300 YVEGgSAVHGSFVKEGCFQEIIFYFAPK-LIGGthAP-SLisgeGFqsMKDVpLLQFTd----ITqiGR---DIKLT--- 367
WP_013762549 289 LVEGgQKVLSSLIDTGLWDEARVLIGQK-SLTv--GI-PSptl--------pgSPEk------NLklGF---DELk---- 343
WP_039123224 294 LLEGgMKLIRSFATVGAINEFITYVSPV-LVANs---nPKk------------QLVINk----TSyiGC---DLLIN--- 347
WP_109324343 282 LVEGgTKTLSAFLQSGLVDEVWKQEKDI-TLGk--GI-PEpeygLK--------WKq------HQqvGE---DNVW---- 336
YP_170577    294 LVEGgNKTLNSFINQKLVNEFYTYLAPV-IIADy---nPKq------------QLSFNq----ISv-RE---DIIIN--- 346
WP_069126092 286 FVEGgAKILHAFINGGYYQQLLSYVTPH-LLGSe-GV-DAig----gaIVQQpNLKLIs----MEqlGT---DFKLQ--- 348
WP_012056136 288 LVEGgTQLINSFVEADVWDEARVETAPV-RLYq--GV-HTpml--------gkEAVSGisgrsVMsiKNhnyEILNHnde 355
EHR75624     274 LVEGgPTTVQQFLQAGLVDEFYLVESNVeHVe---PVpSMidd---lmLQQA-GLVRGsdd----rwG----DETVQf-- 336
WP_003667954 288 YVEGgPTVHQAFLRKGLFEELITYLAPQ-MLGEk-GVpGMes-------pHQlHLAHQe----IKvlEN---NIRIagrk 351
WP_084274233 261 LVEGgAAILQSFIDAGLYDFVRVETSPV-RLNt--GV-PApaigLV--------PAd------SFevGT---NRId---- 315
2B3Z_A       368 -A-KPTK 372
WP_013762549 344 iY-Q-HV 348
WP_039123224 348 -S-KIKD 352
WP_109324343 337 -Y-Q-AE 340
YP_170577    347 -S-CFKE 351
WP_069126092 349 -Wl-PQE 353
WP_012056136 356 fE-K-S- 359
EHR75624     337 -WtR--- 339
WP_003667954 352 mehv--- 355
WP_084274233 316 lY-G-RV 320
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