Conserved Protein Domain Family
ArlJ

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COG1955: ArlJ (This model is not part of the current CDD release)
Archaellum membrane component ArlJ/FlaJ [Cell motility]
Archaellum membrane component ArlJ/FlaJ; is part of the Pathway/BioSystem: Archaella
Statistics
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PSSM-Id: 512484
Aligned: 353 rows
Threshold Bit Score: 142.118
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ADM28478      89 IIQl-------------ILGLM----------IAV----------IIPIM-VFVYRLT----KPYIMISNR--KNSVESE 128
WP_013267383   9 VSLlhvsa----lviaaGLLLLavg----rtrLEAp---------sLLIImAGGG-AL----LYWLLSHRT--YIKLDVD 64 
WP_015232535  10 giklspfniisialmffGLIIIiif----grrFLIy---------gFSIMgIGML-LF----LANYLRNRT--YIKIDFD 69 
WP_103286830   1 -------------------------------------------------------mRL----LSKLVTKQS----SVSRT 17 
ADM28442       5 SIVktpaf-----wisiSLIVIafiapspyniLSIt----------MSPI-PILLKYI----IDLLRRRGV--TVVIDED 62 
WP_148680990   1 ---------------------------------------------mlglrkTTTA-VTedpsQPGVKTKGSfvPKRVDET 34 
WP_084790627   1 ----------------------mktaidlkkiL-----------------------PF----LPGQSSKSS----TLDET 27 
WP_055409093   8 VKIersklldpiflaslAVPVAa---------IALisspvaytaiVVPAL-AGVWRIL----LPIARRQAR--TNQMDMD 71 
WP_011278021   1 -------------------------------------------------M------SV----IFD---RNK--KEEMDSK 16 
WP_009992490   1 -------------------------------------------------M---------------LRIFSA--KNEVDSK 14 
ADM28478     129 LPFFMAYVSTMARGGYSLEKLIERVSQLK-IFSGIRLEAQRIVTHMKMFGEDPITALDRVAMNH--PSTRFRDVMLGYTT 205
WP_013267383  65 FLYSLLHMYVVSTGSQPPGEIVRSAS--KgPYGHYSKTYKKAAELSKRWGYTVPEALSLSSRGE--RNKAFKEFMERFAV 140
WP_015232535  70 FLYALLHMYSVSTGSQPPGVILRVTG--DgPHGRYSKVFKKAGELSKKWGYTVPESVNLISLKE--KNKAFKEFLERFAV 145
WP_103286830  18 MLYFVTFLYAISTGQVSATELINVARTSN--YANYSKAMKDIYALGISWRYNLAHATELVASRFlnNDLAFNQMLMKLAQ 95 
ADM28442      63 LLYLVTHMYSVSTGRPPHEKLFRLSNISGkGYKEYSSILNRIANLAKRWGYGFVVATRIQAKNV--SNPIFRDFLTRLSE 140
WP_148680990  35 IVYFSLLLFGISTGQIQPSDLIKTSGNTK-QYGYYSQIFAKIHLLGVKWQYGLAKACELVAAEI--KAEEFKLLLMKLAQ 111
WP_084790627  28 LVYFVTFLFSLSTAEISPSNLLKTAGSVG--YGIYSKTVMEIHNLGLRWQYGIATAAGIVASQV--PNEEFKLFLMKLEQ 103
WP_055409093  72 LLFLLAHMYAVSTGRPARRRLFELNTLVG-EYGDYQRVLRRIAVLAVEWGYGFVRATRMLANQV--RNDAFRGFLIRMSE 148
WP_011278021  17 YIFMLAFMMALFSAGLPPETVLLKVSNKD-SFHPYLKVFRRIKNLVSGFRYKFSQGINYAIRNS--KVKFLSEFLVRLSQ 93 
WP_009992490  15 YIFMLAFMLALFSSGVPPEIVILHLSRED-SFEPYTKVFKKIRNLVSGYRYKFSSAITYSIKNL--NIRFLKEFLIRLSQ 91 
ADM28478     206 TLRSGGDVVHYLETRTREVFESRMNEIRALFGRLASYLEVYTVFGVIMAIAVFIFFAVSGAL-TaaqaarmspeGlEsip 284
WP_013267383 141 ISAVGEEVTSFLKVEYETIKFNYQNFYNRSLDSLNVLYGAYASTMVSVIFAVTTMMLLFFFF-Gg--------------- 204
WP_015232535 146 VSSVGEEITQFLKVEFETLRFNFENMYNRSLESLNVYYGVYTSTMVSVIFAISTMLMLSFFF-Gg--------------- 209
WP_103286830  96 MIRLGENLAQFLKQELDVTIQAYKTYYEKQLESIKLMTGLYSTMMSTAIFMIAASIIMGIFS-Gsa-------------- 160
ADM28442     141 AINVGEDLEKFLLMEQQTMVVSYEADYARVLEATRILLGIYSASISSALFININLILISILFfG----------GiT--- 207
WP_148680990 112 VLRLGEDLSTFLSQELQAVMHGYITTYERAMRSLDMLLEMYSTMMSTSSFLVASMALLTMIS-Ggg-------------- 176
WP_084790627 104 VIRLGDSLRDFLKSEMAAVVNAYASAYERSMESLKLLLGMFSTLMSTASFMIAAMMIMSMI--Ggg-------------- 167
WP_055409093 149 VLRTGDDVVRFLRVELETAMRQFTSSYMRAIDLMRIFLGLYTTLMSASAFVILTFTILAVFM-Gg--------------- 212
WP_011278021  94 AVTFGDDMVQFLEREIDFSLAEYSSHSARVIESMNNFLTVYATLNSSLAFLVADMTVLSVLY-Sg--------------- 157
WP_009992490  92 AVTFGDDMIEFLSREIDFTLSEYNAYSARLIESMNNFLTIYATLNSSLTFLVADITILSLIY-Sg--------------- 155
ADM28478     285 idITMPALFNFLVLPMMGLAILLVTHMTQPKTPVr----------fAKPYTTL-VTYLPVSIAVSIL---ILIlaggidi 350
WP_013267383 205 -tSLRIVILSYVAALVAISVLGVLVILKAPKDLFeakrs---rnptALLADILaAAGFVLGVIISYL---VLs------- 270
WP_015232535 210 -sSLKMIILGYIAAMFIIVILGALVIIKAPKDYFeakas---rnptARFSDILaLIGVVVGSIMSYY---IIt------- 275
WP_103286830 161 -dNNMII-ISIFASPAGLGAFVFLMYKGFPRDEIvnengsiasryrL----FA-YPCIASSVGIALL---LFIt------ 224
ADM28442     208 -----TILVSFIGTVLALAALVYLIRRSLPKQDIvhdmk--inmpeRKLYLYSlLASVIISSTVGIL---IINiyrd--- 274
WP_148680990 177 -dSSQLVVIVTLTILMGLASFVFMAYYLFPKDRImikeg---hsdmVKIKKML-MMALGTAASIGIS---LSFl------ 242
WP_084790627 168 -dSSTIIVVAFATI-AGLGAFALMMYMIFPKDKLmnengehlkqfkK----IF-LPSVGASVAIGIA---LLFv------ 231
WP_055409093 213 -dSS-VFVVSIMALTVTIAVFAFIAKMISPRDPIiyrskevlnpmlARLARIT-RLAFTASVVLGLL---TYTitrd--- 283
WP_011278021 158 -gSSILLQIFFLSTVILVNLTVIMYYIYKPESYMry---------sSRDRLLL-TALILLGIALNLTytsFI-------- 218
WP_009992490 156 -gTTLIIQLTILSLALLGNLTLVMYLLYRPENYIry---------nVIDKFVL-TFTISLSIIFSVIytsYI-------- 216
ADM28478     351 fmgrlglkqVEAALLAFLG-GILTISIPT---WIAYRKEVKGHKGLVKSTADFLRDLSEIRKTGLSPEKCIILLSARNYK 426
WP_013267383 271 ---------HGVNYVTVGI-SFIVFGLLFvpaGYVINNMENLIDDYDKFFPVMIRSLGIYLSQVPDLRQAVKELSKIELG 340
WP_015232535 276 ---------DAVNYVTIGL-SLIIIGLLLipsGYIINDMENIINDYDTFFPVMIRSLGNYLSQVPNLKQAIKEMAKVELG 345
WP_103286830 225 ------------DILASKLlAMAVASLPLialGYYTRKIEGKVYTLNYWYPAFVRYFGEIYSTIGSLRNTLRTALKSDFG 292
ADM28442     275 -----------------psyFLIGFGVFMiipGIIGRRIENKVKNIESFFTVFIRSLGLAFTTLRNYAQSLRSILRTDFG 337
WP_148680990 243 ------------NILPIPL-VIAIAGVPLilpGLLARKLDAKIRKLDDSYPSFARHLGDVYSTVGSLGQSLKSVLRSDFG 309
WP_084790627 232 ------------PQVSREI-IVSAVGGPLifpGFVAKRVEGRIKKLDESFPSFIRHLTEIYATVGSLGQALKTVMKSDFG 298
WP_055409093 284 -----------------pmyTILAFALPAlvpGIVAMRIEGFIKRINMFYQVFVRSFGLTFSVMPNYASALASVLSADYG 346
WP_011278021 219 --------------------TMIITGVLYlgvGMRYRIFENKINNLERYFLLFTRYFTRNYSVVNNLKESLMAVLRGDLG 278
WP_009992490 217 --------------------VLMGTGIVLlgiGLRYRLYENKINRIERHFLLFIRYFSRNYAIVSNLKESLMAVLRGDLG 276
ADM28478     427 NLTPVVSRAGAALSIGLSLEEALRKALRGVKEWFTIASFRFLTDSILVGG 476
WP_013267383 341 RLRKLLENLQASLAMGVDKGIAMAKFAVQTGSENIYRSLQVFTDVMDHGG 390
WP_015232535 346 KLKGLLKKLHSTISLGVENDIAMQKFGLDTNSETIYRGLKIFSDSEKYGG 395
WP_103286830 293 PLNPYLRALLNRVENKVNADDAFEQLSSETANRLITDTNIIIVKGLQKGA 342
ADM28442     338 ELTKPLQRLYSRLRNGVDRNIAMYFFIGETGSETVRRGMDIFYDAVESGG 387
WP_148680990 310 ILNTHIESMTNRVMSRIKIEDAFDLFSKDTGSVLISAGNDVMSNALVKGA 359
WP_084790627 299 GLSTHARSMLNRVLNRVTMEQAFELFSTDTGNELITASNKVISISMIKGA 348
WP_055409093 347 VLTPYLRRLHARITNGIDPHIAFRYFVLETMSTNVLRGTNIMVDSIDAGG 396
WP_011278021 279 SAKPMIRRALNRLNLGVNKSKIFSLMGRESKSVLVTMLSEILYETISNGG 328
WP_009992490 277 DVRPLIRRSLNRLNFGIDKEKIFRLIGDESGSILVSMLSKVLYETISMGG 326
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