4YV7


Conserved Protein Domain Family
RbsB

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COG1879: RbsB 
ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 441483
Aligned: 954 rows
Threshold Bit Score: 61.0939
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4YV7_A          5 KALS--GIALg--aAX--Als----ftG-CsvpGdd-----aAQN-Apv-vdGALKIGFSQATQQ-S-PFYVALTDAAKA 64  
SQF98359        2 H-----RVLQg--lLIavAs-------GwL---Sca---------------sAASVVFLSPGPAT-D-GYWATYAKFMKS 47  
WP_115718907    3 R-----FVLVf--iLFsiS----------L---Gah---------------aVTRVAFLSPGYAN-E-PYWENVDSFLIA 45  
WP_066522850    2 RKIRraALAVac--iLf-AcgvllsfgG-C---Aehg--astDSPa-----aSPIIIGISVPRSE-EaPVTNALL-SIQN 65  
WP_125975659    6 H-----FFILi--lLLssSs-------Sw-----------------------AISVLFINPGKES-E-AFWVNVSQSMAA 46  
WP_015325775    2 K-----RLYVi--lILf-Tvv----tiG-C---Nlni---erINPlTssspkKEITIGVSIASTRpN--ITEIIKKAFIK 60  
WP_107753834   14 R-----IVAFs--lVLl-Vvl----tgG-C---Gllk---kaKKPlSkk--eNEIPIGVAMANMAgD--GYPFFKKEMDK 70  
WP_078119085    6 T-----FLRLslpvLLavAa------lTaH---AepgssadrNGNga---aqAEPLKIYAFRPHN-R-LFWSRFSTYLEA 66  
NP_744521       3 K-----ALCQs--lCLvlPl---------V---Ana---------------qPASVVFLNPGLST-E-TFWTSYTRFMQA 46  
WP_007090773    8 A-----ALCAilggAMhvDa-------RdL---Nnv---------------sEPRIAFINPGYGD-R-GFWKDVRDTMQA 55  
4YV7_A         65 eAQ-AQGDELFYADANGDITKQNNDVQDLIT-RGI-NVLVINPVD-PKGVTPSLAAAEAAGIKVVTVDRPVEs--GA--A 136 
SQF98359       48 aAD-KLGMSLTVRFSDRDTRQLLILAREELLgPKRpDYLMF-SNE-LNVAPEILRLSEGSGVKLFAVNNTLTp-dQIriL 123 
WP_115718907   46 aAS-DLDVQVEIVHCDRDEKKMLDLADWLIQrPNPpDYVLA-VNE-NGLGVELVKKFNAAKIPIMLVLNDLDq-rQQqkL 121 
WP_066522850   66 nLKpEe--EIILKDAEGSNDKQEADIIELAD-QEI-DVLLVIPNR-YSGLQNAFAYCNSKSIPIIVFQTTTKyrdQV--S 138 
WP_125975659   47 aAQ-NLGMELRVVYAERDHLRMPSLLQQTLDqGPKpDYLIV-VNE-RQMAPPLLAIAERAQIPTLLTLNDLTp-eQIkqF 122 
WP_015325775   61 dRN-KQNINILWQKNSDSIKKQKEDVISLIK-QEV-DIIIIKLLKiNQQSKEIIKLINENSIPVVALDKLPPn-tKV--A 134 
WP_107753834   71 gAK-PAKVKLLWQDAKNDGPTQAVQVEKLLE-KKI-KALVLLPAD-AAIARDIVSKTAQKKVKVLILENLPRd-vNA--D 143 
WP_078119085   67 aAD-DLGVELTIIDAGNRPETMIEQAQTAV--EERpDAIIF-TDF-DGNGEQMVRIAERAQIPIFLVNTLLRn-eALapr 140 
NP_744521      47 aAD-ELGMTLQVQYSERRADLTLTQARAILSaPQRpDYLVL-VNE-QYVAPEILRLSRGTGVKLLLVNNGLTa-sQRlsI 122 
WP_007090773   56 aAD-QFGFDLVVFDSDRDWKQMAESANRVFAmNPPpDYIIA-VNE-HQQGTRIVLEAQERNIPVLMLLNDLTd-eQKqrF 131 
4YV7_A        137 --------SFVG---RDNKAXGELVGKAAVD---TLGpDGG-------KIIEIQGdAGGAVARDRRDGFQAAVSGRPNIT 195 
SQF98359      124 gdlrqrypDFLGslvANDEDAGYLTAKHLISl--H-PrGDGar---aiEMLAFSGtNTTPVSLKREKGLYRALAEHPEVR 197 
WP_115718907  122 gvprqrypYWLGilvPDNLQAGQQLTSALSGm------LPDkk---tvPLVAIAGdRSTPAGLNRQAGLLWATRTHHKLK 192 
WP_066522850  139 --------AQIY---FDYWRAGAETAKAVAS---RLA-ADGsldeaeiEIGMINN-NTRSHNVHNSNAFIEGLSSYKNIR 202 
WP_125975659  123 gaprthfkYWLGsvfPDNQQAGYLTAKALLTrlvQ-TkKPGang--lyQLLAIAGdKSTPASQDRVLGLQRALKEFPNVE 199 
WP_015325775  135 --------AYVS---ANNFKVGKSQAQYLID---QIN-KKG-------NILILKGdKDDKKAQDITAGNKTILKKHKKIK 192 
WP_107753834  144 --------GFLS---PDWLRAGELQGELLVK---QKF-K-G-------NLLVLTAaQPSMVEEALFAGLQRSLQGLTGIK 200 
WP_078119085  141 v----syrHWIGtlaTDDYRAGRQLTNDLLY---A-ArRKGie---qpRILAFSGdGGGLSLNRRLRALIDVTQDRTDAS 209 
NP_744521     123 egqpdkyaEPLGtlmSNDEQAGFQMLHLMLAq--L-PrDAGp-----vDLVAFAGvKTTPASQLRVEGMRRALADFPQVR 194 
WP_007090773  132 grpgrelgFWIAtlvPDNERAGFEIAQSLAIaakD-AhNGGlrk--dlCLLSLAGdSMTPASLQRLRGLDMALEQYPLLR 208 
4YV7_A        196 IVEGP-Y-CDYIRSKAVTAXQDLLQAHPDLKGVYAQNDDXALGAXQV-LAENN-Rt---DV--KVFGVDGLXEAVRAIAD 266 
SQF98359      198 LRQIA-L-GGWRRDRAHEQARLLLKRYPAVNLIWAANDLMAFGAMDA-IREKG-GepgtDV--LVSSINWSPESLRDLQQ 271 
WP_115718907  193 LMALR-Y-GFWQQARANRQMMQLLGLYPDLRVVWTADDNMAFGAIDA-LRQAG-LepgkDV--LVGTFASSAKALRLRRS 266 
WP_066522850  203 ILPPEyVvAG-TIDDGIYCLYSYMDEYPSIKVLWSINDRCSIGAIYAnL-Q-GdTd--eDL--IFVSTGGTQDALKLVKA 275 
WP_125975659  200 LKQIV-Y-GNWRRGLAAEQMNVLHDRYPDVAAVWCANDLMAFGVISS-LEQRR-Gpr-kEV--FVSAINYSNDAISMIKN 272 
WP_015325775  193 IIKEKwH-NNWSEQLANLTVRQTIKENKKIKAILANSDQLALEAIKV-LQKEK-In--kEI--IVIGANASKKGTIALIK 265 
WP_107753834  201 VKQAPlD-VTGKPEDVATRAYEALKSQTGIQGIVVQHSLLVPGLIKY-LKEKK-Ek--qETlpVTVALGASKEGAAAIAG 275 
WP_078119085  210 LVTVQ-Q-AP-HAENVAALFKAAISANPDINVVWGVTDDSALVAAQT-AHEMG-Lt--rPM--VFGGIDWRPESLEAMER 280 
NP_744521     195 LRQVV-Y-GGWNRQRAYEQAKQLLERYPATRLVWSANDQMAFGAMQA-FEEAG-HtpgrDV--LFAAVNSSPEALRARID 268 
WP_007090773  209 EQRRL-V-VNWSFEEAYRRTAEWLATGGCLDAVWAANDSIALGAIKA-IEEFG-KvpgkDV--FVGGLNWSTEGLENVAS 282 
4YV7_A        267 GDQYvATALNDPDAEGRLAIQTAAKVAR-G--E-S--V-P-E--F-V---DAG-TGLVDKSN---A 314 
SQF98359      272 GRIG-AIAGGHFT-LGGLAMVLLHDYDA-A--D-P--QtR-SfiGaR---EAKvMQLVGPGD---V 322 
WP_115718907  267 GEIS-ALAGGAFM-APGLALALLVDYQN-G--F-D--FaN-DdgLvL---HLPlYHLLIPGT---P 317 
WP_066522850  276 GRLL-STVWMDQQELGKRVVETVHRLLD-K--E-A--F-EfEq--vIe----P--VLVTKKN---V 322 
WP_125975659  273 GRLT-ALSAGHFM-VGAWSIVLLYDYAH-G--R-D--FgR-QqgTqM---QLPlLSLVSVSK---A 323 
WP_015325775  266 GDMS-STVDQMPYIRGLNALKVATFIARkEkwNwDgiI-K-NgkYnIkliTTP-IKLINKYNvkrL 327 
WP_107753834  276 DLLT-ADVDTRPDLLAYYALAGASKLAKkEmlEyDqkI-K-NdgAdVpvkVIP-VRLIRKDNlylL 337 
WP_078119085  281 GLVD-VSIGGHVL-DGALALIMVTDYLN-G--H-D--FiS-QaaDlR---Sn--LYAITPAN---L 329 
NP_744521     269 GRLS-VLMGGHFT-LGGWAMVMLHDDAH-G--L-A--LnR-DgvReR---RIPvLQEIDQAK---A 319 
WP_007090773  283 GKMT-MTHGGHFL-AGAWIMVLLKDYLE-G--I-E--KmT-TnpEvS---Fg--MQAITRDN---F 331 
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