Conserved Protein Domain Family
COG1747

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COG1747: COG1747 
Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown]
Statistics
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PSSM-Id: 441353
Aligned: 18 rows
Threshold Bit Score: 621.099
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_713558      1 MSNeIsattes---rpandLDKLTSLFNEEIYVRTDANSIPASKFKIFDDLIEFYKSAGKIdEAKRKIEEYLSEHEDSIS 77  
NP_220153      1 MD------------------------------------------------------------------------------ 2   
NP_224937      1 MD------------------------------------------------------------------------------ 2   
WP_012389290   1 MPEtItedks----nkiadNDKLTPLFNEEIYVRADAGTVPVSKFKIFDDVIDAYKAENRLaEAKQKIEDHFKEHPESIS 76  
WP_013044351   1 MNKeA--------------------------------------------------------------------------- 5   
WP_013181185   1 MS------------------------------------------------------------------------------ 2   
WP_013944655   3 MN------------------------------------------------------------------------------ 4   
WP_079891742  10 MG------------------------------------------------------------------------------ 11  
WP_014804944   1 MSEtEtvqetkpageaetlEARIQSQFNEEKWTRLSAKDVSISRFKILEQILDEVKKQGKHdLLRSESLNHLGEYESSIA 80  
WP_059059576   1 MG------------------------------------------------------------------------------ 2   
NP_713558     78 ARYLLGILSLERGEISDSgLLKNLLESFKVASKWAIIEHITDQILKYGDQRLALKYKAEALEKLKkNKELKIVLEKLAKH 157 
NP_220153        --------------------------------------------------------------------------------     
NP_224937        --------------------------------------------------------------------------------     
WP_012389290  77 AKYMLMIISFMEDSMGDAnLVKNILDSFKAHAKWTIIEYITDSILRFGDHRLALRVKAEALDKLKkNKELKVVLEKLAKQ 156 
WP_013044351     --------------------------------------------------------------------------------     
WP_013181185     --------------------------------------------------------------------------------     
WP_013944655     --------------------------------------------------------------------------------     
WP_079891742     --------------------------------------------------------------------------------     
WP_014804944  81 AHYFIGMMALEKNIPDEIvHLKTLLDQFQEASKWAVVDYLSEKMLAVTKTRTILRARANALEKLGkHKEAIPVLEQLAVL 160 
WP_059059576     --------------------------------------------------------------------------------     
NP_713558    158 DRKNPEILKKYALSILEENKEKAITYLKQAIETFAKTKDYVQLEEIWSIIVNNNHEDLQFFERIERIMLGHRERTRLVGY 237 
NP_220153      3 --------------------------YLEKLQSLMENHP-SDFFSLWEEYCFNDVVKGDELVVLLEKIKGSTIAPAFGKI 55  
NP_224937      3 --------------------------YLEKLQVLIEEGQSANFLSLWEEYCFNDVVRGRELVEILEKVKSSSLASLFGKI 56  
WP_012389290 157 DRKNPEIAKKYGFSIMEEDKPKAMSYLKLAVEMYAKNKEYVPMEEIWPTIVQNNYEDVSFFDKIERILLGQREKTRLVGL 236 
WP_013044351     --------------------------------------------------------------------------------     
WP_013181185   3 --------------------------YLEEFQNQINNRDFHKFFQLWEEYCTNDEVDSDEFISLLDIIKNSDFNTLFGQF 56  
WP_013944655   5 --------------------------YLDQFQKHVANHDYPSFLTLWEEYCLGDEVDGEELKRVLKSVKESDLATPFGRH 58  
WP_079891742  12 --------------------------YLEEFHTQIQNRDFNKFFQLWEEYCTCDVVDVEELLQLLSMIKKSDLAKPFGEY 65  
WP_014804944 161 DRKNPDIALKYADAIINEDLEKGLQFYKQAAEAFARNLQFEKLKTTWNRLIELLPDDFNFYKKIERILTGHRQREMIAEL 240 
WP_059059576   3 --------------------------YLKEFLTQINNRDFHKFLVLWEEYCTSDTVDTEEFSQLLKAIKSSDLAKHFGQI 56  
NP_713558    238 LYPIVEPYKQLEDWDKVIYLLKKILEHE-ASSNKARNELIRAYKAKYVNHSLLEDFLKMSEIGNNRKPIKVCIANFERNI 316 
NP_220153     56 AESVIPLWEQLPEGEEKDKVLSLVFDVQtTNSKNLLEIALQQV-KKYEDSANYKEALRIVGLRDG-ITFSHCLGRFALLM 133 
NP_224937     57 VDTVVPLWEKIPEGKDKDRVLQLILDLQtSNSQMFFDIATEYVNKKYSGEENFNEALRVVGLRDG-RDFQFSLSRFDFLM 135 
WP_012389290 237 LYPIVEPFKAMEDWDHVIYFLKKILEHE-PASQKARNELIRSYKQKYVAHSLLEDFLKMSELGNNRKPVKLCITNFERNI 315 
WP_013044351   6 ----------------------------------------------------------IDALIAKTPKLAGARAKLE--- 24  
WP_013181185  57 AETALPLWQCIKDDEESYQVLKRILDLQtSNSSLLASTAISMLKKRYGEDPKFKERLRQIGLRTQ-ANFQGAISNFELLN 135 
WP_013944655  59 VEKGLILWEKIQSTELGHEVYKLIVDLQtSNDPELGKQILDYLQARYPDDKYYHDKIRLIGLREG-KDFQGAVSNYELLT 137 
WP_079891742  66 VESALPTWEKIENPKDSYEVLKLLIDLEtTNTPLLAEITHDILKKHHGNDPLFEERMRLIGLRKK-DKFQGAIANYDLLA 144 
WP_014804944 241 YVLLANYFIKKEDHDKVMLLSKKILEYN-PNFARFKNELIRTYREKYKSHSLLEDFIKYSGLTDTRKSLQSSILNFETNI 319 
WP_059059576  57 IETALPLWKTIADPAQSYEILRLLIDLQtTNSPALVDLAIEILQKHHGHEAKFNERLKLAGLRNK-DQFQGALSKYDLVA 135 
NP_713558    317 VFDTNNYVLHR-NWGVGKITSIspNGDSIFVDF-KDKKDHKLSIQMAITSLKPLKRDHIWVKYYENKDEITELFKNNIPD 394 
NP_220153    134 HLSEGNFVFHQgGWGVGEIMGVsfLQQKVLVEFeGVLTAKDISFETAFRMLVPLRKDHFLARRFGDPDAFEAFARKEPVA 213 
NP_224937    136 HMHKGNFVFHQgGWGVGEVMGVsfLQQKVLIEFeGIMSAKDISFETAFKSLTPLSGDHFLSRRFGDPDGFEAFAKENPIE 215 
WP_012389290 316 VFDTGNYVMHR-NWGVGKITSIsqTGDSIFVDF-EEKKDHKLSIQMAITSLKPLKKDHIWVQHFEDRQGINTMFAENLPE 393 
WP_013044351  25 SMGPGNYCLHR-SWGFGKIVDFneAESKIIIDFeEGKQGHAMAVAFCVDKLDILKPNDMLVRSRTEPDVIEEMIKKQPAD 103 
WP_013181185 136 HMAKGKFVFHTsGWGTGEIMDIshIREQVAVEFeNVTGIKHLSFENAFKTLIPLLDEHFLARRFADPDLLEKQAKKDPLE 215 
WP_013944655 138 HMKKGNFVFHTgGWGVGEIIEIsfLREQLSLEFdYVSGRKDLSFQNAFKTLIPLKDDHFLSLRFGNPDELEQRAKKHPID 217 
WP_079891742 145 HMKKGKVVFHNaGWGTGEIMDVslVREQVILEFeWVSGRKDLSFANAFKTLIPLPDDHFLARRFANPDELEKEAKDDPVA 224 
WP_014804944 320 VFDKGNYVFHR-SWGVGKITEL--NTAEMVIDF-KDKKAHKMDIQMALKSLKPLREEHFWVMQFEKPEEMTKLFKEDITA 395 
WP_059059576 136 HMAKGNMVFHVgGWGTGEIMEVsfVREHLVIEFeNVSGRKDLSFANAFKTLIPLSTNHFLARRFADPDRLEREGREDPVG 215 
NP_713558    395 FFKELLTSFNNRMLTADIKSEVSGKFLPVAEWSKWWNKAKNIIKKEPNIGFDPKKKDELVYREKAISLSEELSEKFAHQT 474 
NP_220153    214 AIECLLKDL-GPKNAKEIRNELVELVIPEEDWSRWWQSAKIKMKKDARILAPASSKDPYVFDPKGFSFVSQLQASLSGSN 292 
NP_224937    216 VVEILLRDL-GPKTAKEIKDELVDLVIPEADWNRWWQSAKTKIKKGTRIISPDNPKEPYVLSDAGCSHMGQLERKLGLSL 294 
WP_012389290 394 FLKQLLKSYDNRMIIGDMKNELIGTFLKQEEWSKWWAKVKSVLKKEANIGMNPKKKDEVVYHEKPITHSETLTQKFQASN 473 
WP_013044351 104 LICEILATDEEQAMMATEIERILARVIGPIKYKKWWTATKKLLVKDPRVGVPNKKTEPYILRDEPVKPEEEILELFHGTK 183 
WP_013181185 216 VLKALLHDL-GPKTAGEIKDELCILVIPEQEWSRWWQNARARLKKDTMVETPNSLKDPFILRKKELSHEEEMHREIEKQT 294 
WP_013944655 218 IIHSMLRDL-GPLTAAEIKEELCELVIPADEWVRWWQTARSKVKKDTMIETPNDIRQPFRLREAEVSHEETLQKALEKKP 296 
WP_079891742 225 VVQLLLKDL-GPKTAAEVKDELCELVIPEKDWNKWWQGARAKVKKDTMIESPEGIKEPFRLRKTALKHEDRWQNAIDNQT 303 
WP_014804944 396 FFKILLQSFGGRLSLADIKTELTDKYVPLSQWSKWWSKIRPELLKDALIGNSAQKKDVIELHDTPITTSESAIEQFQAAQ 475 
WP_059059576 216 LIKLLLHDI-GPRTAAEIKDELSELVIPEKDWTKWWQGARAKIKKDPLIETPDHLKEPFHLRKAELSTEERLKNAMHNKT 294 
NP_713558    475 DANKKLDIAMEALDNREDA---EGAIEAFNHFYYE--EEEAADPVRKIVAFLYLQTASEELGde-eIPRHLNESKIAELI 548 
NP_220153    293 DANKKITSCYAFVRDLGSElkdESNRQLVIKELKAl--dLPADSALLIQRAMLLSEF---------LGEKAPELECENIA 361 
NP_224937    295 NSAEKISLIYHFIRDLHSElknIEIRKSLVKALQDl-DVEEGNKSLILQRELLLSEY---------LGIKDASIDKEYIT 364 
WP_012389290 474 DANKKLEIAMEAVRDSDEA---AEAGEFFISHYVE--EESARDIIRKISAYLYLEEAGKAWPte-eFSHKIREPELKTLI 547 
WP_013044351 184 NSKEKILLGEKLYALSENIsviREELPEILNELTEaiANAKSLTQADRLHGVWVRNNLARELhe---dvEALEPSSASIL 260 
WP_013181185 295 SVDDIVQTTYTYVRDLPHVlrrREVKDTLRDKLVSllDEEQLSSAQELQICIFLETL---------FGHSIEGKSVKDFI 365 
WP_013944655 297 DAETLIQMIYAFLRDFPGTlknDAFRMDLQQKMKEalDSEELTDAQELQLYFFLED----------LEISKDASQVAELI 366 
WP_079891742 304 DTNDLLQTSYQFVRDFPNIlkdQEVKKTLQAKITGllTKSDLLPEQEVQAHLFLDSF---------LGLSEHGRMAQALI 374 
WP_014804944 476 GFEDRVQAFIDVLKAPEEN---LEAIEFIAPHFREt--lKSLDPNTRLKSLWLLEMATEALAddepLFSKEQQADIIQAF 550 
WP_059059576 295 DASEIIQTTYSFVRDTAGAlknATTKNTLQTRLINllETPGLSEDQQLQIHLLLEQF---------FGYEPSESHISQLV 365 
NP_713558    549 KslPVSSLIEVSTKIGNAEIKKGYVNL-VRKHAHNPEEVLTGILfe-vPIKVNKYVFSIL-EEEGKFDLLNSFIKSAGTR 625 
NP_220153    362 Kl-SEDQLFDIVNNIEILSLQKSFLAL-IHSCSPVWVPVYTKLFlttsTSMLREQVFKVLnADKEARENILKKVFAMIEQ 439 
NP_224937    365 Sl-SEDDTSRLLENMPIVALQKSFLSL-VRKYSSFWQQVFMQILlyttSPTMRDFVYKTIkNDPSSVEVLKKRLLDSAHQ 442 
WP_012389290 548 QtlTKEDALKISKALENTDIKKGFKDL-IRSHHPEAINILIGLLfe-vPVKVNRSVFQNL-VADEKYAELNLFFETVCNK 624 
WP_013044351 261 D--ATDDYSELASELP-AQYYKRYVDLiRRTYEDKWQSMLEDLLrn-sSGKFTSECINFM-LEHELNERISFCLNRWLND 335 
WP_013181185 366 H--SMENVEEVLNSMEIIAFKKRALTM-IRENREDWAETFSSLLfsihQNPLRDYLFQEL-QSSESRELLMKKLNTLLRY 441 
WP_013944655 367 K--RFTSPDDVIRAIEVIAFKKRALVA-IRKLREDWIETFLNLLltidQNPIRDYILTEL-LKAKKEPEVIKKIEELLSF 442 
WP_079891742 375 V--QSDQPFELIQKVDITPFKKRALMV-VRHSRADWSHIFLEMFaktdQSTLREYLIKEIcADEEAKTLLLNMLEDLLHY 451 
WP_014804944 551 KtrTPADLAELYEEVKQTELKRHALKF-AKRHHNEWRRIFLEMLfe-tPVKLHKSIISDL-TAANATEEISEFINRLKKD 627 
WP_059059576 366 Q--SNLAIERVIQDIEIIAFKKRALIA-VKEYRKDWPSIFLSLLfslsQAQLRDYLLKEL-NQPATIKSLETKLKELLAN 441 
NP_713558    626 AKETPEVFIWVAKSILTKVWEGEwLLSSKQeerleLILKVFRMFKPLtKIEDKGTKLKNACKDILHgNDDEILREAIHAG 705 
NP_220153    440 PLLCPELFVWLFARVVDGEDGlf-aESDKKeierqMLASALELMHKV--ATTSQKDLGKKLYSFLVgQRFLVVRQIIDQA 516 
NP_224937    443 PMMFPELFVWFFLKLGNHEDGlf-dPEDKEvl-rlFLESALNFMYQV--ASTPHKELGKKLHHYLVgQRYLAVRQMIEGA 518 
WP_012389290 625 SKENPEVFLWVAKSILSHTWKFDwLKVSEEd----LVLRVFRILKPLaKIEDKGTKLKNQAMDILFgKDNSLLRDILTNA 700 
WP_013044351 336 QTIKGPLLFWVVK------------------------------------------------------------------- 348 
WP_013181185 442 PERHPEIFVWYFQKICKKNPGni-pFSNKEgq-cqFFEAFLILLHRI-EHENEWKDLVKKMYNTLTsKRFEVVRNLIENT 518 
WP_013944655 443 PGRHPNVLMWYFQKVMKPEsi---pFANQEgk-nrFFESFLILLSTL-EQSSGHRDLIKKMHTFLTsGRYSNVRKIFQKA 517 
WP_079891742 452 PEKNPELFVWYFQKVVKKADGi--pYNDKEgq-grFLDGFLVLMHKL-EGDPQQRELIRKMYNLISeKRYAVIRALIDGM 527 
WP_014804944 628 VKTNAEVFLWTVKSVIAGQLELPaGQTQEA------LLGLFRMMKSIpKIEPKGSKLRNSVRDIFFgSGKDDLLNVISRE 701 
WP_059059576 442 PAAYPEMFVWYFQKLIASTDEdl-pYQNKEgl-ehFFEAFFILFRSL-ENQPDYRELWKKMYSMLSsKRYALVRQLLQGT 518 
NP_713558    706 NSEYIRKLYALYKEVPYFTDLEKERLYSLIVELKPDVAWEEDEDEDEe--dDDILTRIPEGAILVTRRALNRKKEEFEHL 783 
NP_220153    517 SIEYLKEFVLLSSKCPQFTQGDLGVLRSLAEVVQPALKRGTPEEEEN----ILWTTSDSFTRMKNKLQSLVGKEMVENAK 592 
NP_224937    519 SLPFLKELLLLSTKCPQFSSSDLNVLQSLAEVVQPTLKKHKSNVEEEn---VLWSTSESFSRMKAKLQSLVGKEMVDNAK 595 
WP_012389290 701 DDEYVRKLFALFKEVPYVTDLEKDQLYALINELKPNIVWDEYDSEEDa--dDDPLANLPHDVVLVTRRAFNAKKLEFEHL 778 
WP_013044351 349 ---------------------------------------------------NRNSKKYSAIIDPLVSPRLLSAMFYAIDY 377 
WP_013181185 519 TLEFIKEFLLLVAKVHVFSDHDKKIMRSLAQVVHPSLAPSKSKSITD----DASTLWTTEEGYRKTQERVKRIATVEMVE 594 
WP_013944655 518 DLETVQEFLLLATKCHSLSDHDIKIFHSLAEVVHPSLAKLSKKYE------EQSQENETPIWTTEAGYQKIKKRIHTIST 591 
WP_079891742 528 SKEFVKEFLLLASKCQTFTEHDLKILASLATVVHPTLGAARQS--------KDTKNDQNTIWTTEEGYLQTQERIRQIGT 599 
WP_014804944 702 AKDSVRRFSALLKDVPFFNDGEKIQIVSQLRELNPAAFAEQEDDHDQteiqESLAARLEKSGGTVASLDAIEAMRAKLDN 781 
WP_059059576 519 SLEFTKEFLLLASKCQSLSDHDMKILRSLAEVVHPSLASPKGRK-------GHSSSDEDEIWTTEQGYLKIQDRIRQIGT 591 
NP_713558    784 LNVEMPENSKDIGEAQERGDLRENAEYKAAMEKQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINIGVTAKLKNESTGEV 863 
NP_220153    593 EIEDARALGDLRENSEYKIALERRARLQEEIHVLSEEINRAKILTKDAVFTDSVGVGCKVVLESDQGDKVCYTILGPWDA 672 
NP_224937    596 EIEDARSLGDLRENSEYKFALEKRARLQEEIRVLSEEINRARILTKDLVFTDKVGVGCKVTLKGDAGEVVEYTILGPWDA 675 
WP_012389290 779 VNVEMAENSRDIGEAQEKGDLRENAEYKAAMEKQAQLQAAIKRLEAELKSARILDLSDVKTEKVGIGTTVRLKNKQTGES 858 
WP_013044351 378 EALQNASARRIPLADLLSDDDELIPDLLADANVETARDLAQTLLLNQGFEDLTKKSLIARFIKKFPTVQSLIAGDAAESR 457 
WP_013181185 595 NAKEVEEARSHGDLRENSEYKFACEKRSRLQSEMKMLSKQLSAARVLTPEDVDSSIAGVGCIVEVEEPSGAKEQFTILGP 674 
WP_013944655 592 VETVENAKEIEVARSHGDLRENAEFKAALERRDRLQSELKTLSAQFNRARILTKADVHADQVSVGVIIDCEGDDGSKVSY 671 
WP_079891742 600 TEVVENAREIEAARSLGDLRENSEYKFALEKRSRLQGELKRLSEQLNRARIITKDDIYLNQVSVGSIVELEDPEKNVVTY 679 
WP_014804944 782 LINVEIPKNSEEIGVAQEKGDLRENSEYKAALENQTILQATVTQLEADLKALQQITAEDIDTNAVSIGTRVKLRDGASGD 861 
WP_059059576 592 VEVVENAREIEAARALGDLRENSEFKFAQERRARLQSELKTLSDQLGRARIITPDDILLDEVGIGSVIDVVDNQGQRTQY 671 
NP_713558    864 VAYSILGAWDADTEKHIISYQSPLAKSLLGKKTGDSAVLNLTGAETRYTVL 914 
NP_220153    673 NPDEKILSLKSKLAQEMVGKAVGETVLFQGKKHKIKEISSIWD-------- 715 
NP_224937    676 DPDSCILSLQSKLAQNMLGKKLNDVVILQGKEYKISRIQSIWEEHGA---- 722 
WP_012389290 859 VTYSILGAWDADTEKNIISYQSPLAKSLLGKHTGNEATLVFGSTETVYEVL 909 
WP_013044351 458 EDEGLVVSQASFDAAKAEYEDLIAKKIPENKEAIVIAREHGDLKENSEYKM 508 
WP_013181185 675 WEADIDNGIISYQSQIAQAMSGHKIGDSFTFKDGHYKITALKSVFEG---- 721 
WP_013944655 672 TLLGPWDADPEQHILSFESKLAQSMIGNKVGDKVNIQGKQFTIANLRNYFD 722 
WP_079891742 680 TILGPWDADADTNILSFQSKFAEAMLGRKVGEEFEFRNQNFTIRTIKNIFQ 730 
WP_014804944 862 IFVYSILDQWDADVDKGIISYKSPLGKVLMGARKGSTQTFNAQKLEIIGIE 912 
WP_059059576 672 SILGPWDADPEKNILSLNSKLAQAMVGKKKGESFQFKDEEFQILSLSSFLN 722 
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