Conserved Protein Domain Family
Cas5

?
COG1688: Cas5 
CRISPR/Cas system-associated protein Cas5, RAMP superfamily [Defense mechanisms]
CRISPR/Cas system-associated protein Cas5, RAMP superfamily is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
?
PSSM-Id: 441294
Aligned: 95 rows
Threshold Bit Score: 45.0735
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_014026056   3 LR----AAIAVYRvHWGLSSRAWFGSASQPSYLLPPPTTILGALAKTLHDLGLLgtrefiitsigsgsiltsgaasiiki 78 
BAA80223       1 MRpgdwVVVAELA-TPAFSVKNPESYQVASPLPLPLPSTLLGGLMRGASLLGSCtggia-----------------sqsc 62 
ADM27731       1 MK----VLLFEVK-SLFYSYKAPIAYQVKASNMLPPPSALLGAVYRNYVRETSSsyskd-----------------slse 58 
BAJ50845       1 MK----YLKVEATlHWGLYLNYHAFTKSRPALKTIPPTTLIGALAQPIALKNHWaenses--------------nssaek 62 
WP_011007100   1 MN----ILLVKLR-LPLFSIKHYETYQVAATLPFIPPSTVVGALVQAAARGGLCeg----------------------dc 53 
WP_011011761   1 MD----ILLVCLR-FPFFSVAK-RSYQVRTSFLLPPPSALKGALAKGLILLKPEkyassslde---------aalkaike 65 
WP_011249407   1 MVpltlFLKVQLRpTGIIALRALPQSKMRTALRYVPPTTLIGAISYPLLHISDDrgetiyekktf-----kskaesvigl 75 
WP_064496478   1 ME----ALVALLR-FPFYSFGK-QSYQVRQSLLLPSPSALKGALAKGIILLGGKkgksldei-----------akktvee 63 
WP_013336791   1 MTr---AFAVRLKmHGPITVQYPTLSTAGGSYMLPPPSTLIGALYFAHTARNGVykeveefnn--------decspaygw 69 
WP_048146795   1 MVf---FLKVEASpSGIIALRSLPQSKMRNALRYIPPSTLIGAIAYPLFHIAGYrgetlidrrnp-----rsaadkikdl 72 
WP_014026056  79 Lgrr--wwVSAAWLSp---SIRTGILIRYFTGPyqslKtrr-----edLPQklav--------helfAPIKLGYTIS--- 137
BAA80223      63 IkktgrivKAAAPLSk---PGQILGVEWEVVLrrlrkv-----lepdsEEGstrenrgnrvldelsrISDALLRGYIt-- 132
ADM27731      59 Flrs--vaYAGFAVLpv-dDRGFVSFRKFVVLL----Khwrl--ekdeEEP----------------RPDAMLREYV--- 110
BAJ50845      63 Irt----lFKGIYLSqnlpLIEYNDLSKIFSYdv------------deKQIr--------------tDAAAVSKIYRgvs 112
WP_011007100  54 LaevrgwiYKARDVA--------APTVKFPVVL----KrargvleegkLPLsgee---------lggYFDAMVREYA--- 109
WP_011011761  66 Iesk--lvDIKAVSV-----APLSPLIRNAFLL----KrlrnlesgsnAE-----------------KSDAMRREYT--- 114
WP_011249407  76 Fk------WVTIKTEg--rPKLYGSLLKINTIyr------------gkVQSa--------------vTSFPFAVFYGe-- 119
WP_064496478  64 Lenk--liYVGAKPYk-------sSIIKTPILL----KrlrnledqknPE-----------------KSDAMRREYV--- 110
WP_013336791  70 Vkng--vvLDAVAIPvg-kMAMTNTLLRLFNWTrs------------tKENp--------------yTVGYMGLSYI--- 117
WP_048146795  73 Fl------WVTVKGSi--kPIIYGSILKINRLhr------------gsVESa--------------vTSFPFAVMYGe-- 116
WP_014026056 138 -PHGRVMV-LVA-SEDGDi---------DALKTGLQHvSRLGGKESFVDPLAV--FEAqlvEEhgvneivTPWLTLRECV 203
BAA80223     133 pYNPVYAV-FVArgr----------dnaNRIEKALWYiDRLGDSESLVSARPVgrCQL---AEfrs--ksVNTPVALDSA 196
ADM27731     111 -YMHGRLVgVIAyng----------lnnETLTKVVETiEYLGNSESLIGIRALesglsvksaeecgdgymtqmisssvnn 179
BAJ50845     113 sADDSVKI-VYL-FEEQDvrkffdvgweEMLLEAAWSiTRLGARESIVSVDKVsiGDV---AVlnqktaqTVYYFPSYMQ 187
WP_011007100 110 -YVAEKAV-LVVpSAEah---------iGRLEKALWLlERVGDTESYVSVRGVevLNA---RPcga--geVDVAVKLAKV 173
WP_011011761 115 -FTRELLVaYIF----KNltq----eekNLYLKAAMLiDVIGDTESLATPVWAsfVKP---EDkk---apLAFSAPYTEI 179
WP_011249407 120 -STNSLTA-AYF-VDEDAlses--tysaKDLERAAWGiTRLGSRESIVSVEDVkmGKA---VFreankvrTAYAFPFKGV 191
WP_064496478 111 -FAREILAiYVF---RRKlse----eekDLMLKAVYLiDQLGDTECVGNVIKTewVEV---KEek---apLKTYVKFKKV 176
WP_013336791 118 ---TELVA-IYA-VRDdm---------fNELKRSAWGiVRLGKKEGLVSVLEVsdVEV---IAgtqerliVNSYFPKDVA 180
WP_048146795 117 -QDYSISF-VYL-LKEEAvans--tytlKDFERAAWGiSRLGSRESIVSVESVksGKA---KIregkearTSYAFPFAGK 188
WP_014026056 204 gnvygnyvaektpvprdadelicsysaepcsklnPSLTRFNVlreaihprypg----------------wvrvkintdkC 267
BAA80223     197 vggsftvvyap------------aragrtgrtrrSEAIAIAMpvkkeavergyvlvyseievegsvygcsvegidgrinV 264
ADM27731     180 lprhgvieqcgrvprspwggretadvcyvwnplepagkdlyrpirfgdirtelledlrkkvacvesvalnarlvftsagf 259
BAJ50845     188 ssvkgsflvanvv---------dwrntsigeylgKPTVNLIVpydderkkv-------------------splhvdlrdG 239
WP_011007100 174 aggahlv--------------------vragdedGTLSDFAVplatggkgy-------------------ytptkiavkS 214
WP_011011761 180 ysllsskiqakgkirm--yiekmrvspeysktkgPQEEIFYLpieerrykrivy--------------yartiyppeveK 243
WP_011249407 192 nvhgkgtlqavv-----------dwrlgigdysnAKRMVMFYpeetv---------------------------eveggL 233
WP_064496478 177 skmsinggiie------------nmletpnfgnkVKEEPYLLpliekryrrssy--------------yvesdrifdgnY 230
WP_013336791 181 slmqy------------------------------kydiFMFpdpsskntycggkpaik---eyvfsedgvevgeinpnY 227
WP_048146795 189 evegegtlqavf-----------dwrrgigsysnPQYILMFYpdgev---------------------------tvrgeL 230
WP_014026056 268 GVYRVESlnsvfpskreptieyilvhtrIVIP 299
BAA80223     265 AVHESFHevs----------------gyGIWM 280
ADM27731     260 eclkrg-------------------------- 265
BAJ50845     240 IVYRVGDe-------------------eLVPW 252
WP_011007100 215 DVFCAGD---------------------VAFP 225
WP_011011761 244 ALTVDGEv-------------------lGIWI 256
WP_011249407 234 SIVELDGe-------------------vVILA 246
WP_064496478 231 KIIAFDEv-------------------iGLWI 243
WP_013336791 228 KVVKYGDky------------------aILRW 241
WP_048146795 231 KVVSLDGe-------------------eVVL- 242
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap