4QTS


Conserved Protein Domain Family
Csm4

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COG1567: Csm4 
CRISPR-Cas system type III CSM-effector complex subunit Csm4, RAMP superfamily Cas5 group [Defense mechanisms]
CRISPR-Cas system type III CSM-effector complex subunit Csm4, RAMP superfamily Cas5 group is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 441175
Aligned: 60 rows
Threshold Bit Score: 191.348
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4QTS_A         1 MKMVVLKPKINSKFHFGEgslernskiFHSNSLFSAIVNNYIKL---YGr-eDLEKNIEKIKN---IRLSSLLYKIKNIY 73 
WP_011698208   1 --MPTYRITLNLKGPLGTk--------MVSGTFWGHLAWAICYI---EGe-kSLTRWLEE-QEtrpWVLSSQMP----LG 61 
WP_012174169   1 --MAYFRIIITPSGPLTTe--------WVSGTIWGHMAWAIRYL---EGe-sALAQWMRE-QEsspWLFSSRIP----EN 61 
YP_002248479   1 --MKTYSVKIKPLTGFGDf--------IKGDTLFGHICWQLCYDpkiFGk--SLDELLNDYDKnpfIVLSSAYPVVNNKI 68 
WP_013033753   1 --MTVWCLHLHLQGPIATp--------LHSGTLFGHLCWAHRLM---KGe-dSLIRWLKALPEs-pWLISDAFP----AG 61 
YP_145389      1 MRATLFRLYF--QGPLKAl--------PRAPTLLGHLFWWYRYT---HGr-eALEELLERFRQeppFRLSSVYP----EG 62 
WP_013157206   1 MRVKAFHLAL---GSISAp--------PSAPTLWGHLAWWVRYT---QGe-rALLEWLEAFRHdppFLISSAFP----TG 61 
WP_015424583   1 --MTTWKISWKPLSSLSTp--------LQSDTIFGHLCWAVNYL---WEdknKLTDFLNALKEapcLILSSAFP----AG 63 
WP_041723888   8 VAMEYYKIRLKPKSSFGTl--------PMSDTIFGQMVWTLRRMg------fDVDKMLENYLEepfLVVSDFLL----DD 69 
WP_013886474   1 --MKYYKATIFPKSPFATp--------PMSDTLFGQLIWMLNDLg------eDVAKMLATYDSnpcFVVSDFIA----NN 60 
4QTS_A        74 LIPKPEHPEFykl-----------------kgnPgIKPKDIKKIQFFSIKAYKELLDNELDwknkikhivdyqtinksiv 136
WP_011698208  62 MLPKPLLRPTlrmdap------------ptlkeM-QLDKDVRKVSFIPEGLFLDLREGMND------------------- 109
WP_012174169  62 MLPLPLLPPAakkggk------------psleaF-SLSKNVAKTAYIPERLFLSLRDQLNE------------------- 109
YP_002248479  69 YLKRPALPLSmlfdi--------------seeeIvKNRKELKRRNYFAFEQPLNLLRKINY------------------- 115
WP_013033753  62 CLPRPLLAPErlprqapee------dkaafterL-QKAKKQKKQSWISVRDFLALREGLSG------------------- 115
YP_145389     63 WLPRPKLPPVqv-------------------eeT-TLRKALKSLSLVRLDTFQALAERGEE------------------- 103
WP_013157206  62 YLPRPLLPQVri-------------------ddT-AKRKSLKSIRYLSFATFARVIREGEQ------------------- 102
WP_015424583  64 SLPKPVIPVKdelldeirqtlkgelneitdleiS-QVLKDLKKDKWIRRKDLQekn------------------------ 118
WP_041723888  70 CGIVPKIPARysvgksk----------edkldmL-LNRKSLKQKGYIPISTIIKEPTLTRE------------------- 119
WP_013886474  61 QGVAPKMPTTynlgksk----------mekiqeI-LDRKELKKRSKIDLDKLYKMQKIDSK------------------- 110
4QTS_A       137 isEKEI---EEIK------------------RIFgikaeklkhAKISLISKH-LEQKVAIDRLKditlekdDK----GQL 190
WP_011698208 110 --VVLNqalKSCIkqigvmr---------------------------gpkghgLKAHNHIDRLA-------GTtpdtGGL 153
WP_012174169 110 --PALLeglKKITp-----------------------------ENHSGLESG-HLFHNCIDRNS-------GRtpdaGGL 150
YP_002248479 116 -------------------------------------------ESLSFFKEQ-EQTRCSINRLT-------NTtt-ePPF 143
WP_013033753 116 --EALNwrlADADeq---------------------------tAANGKVVSY-HQPHNTIHRLT-------GTtpetGGL 158
YP_145389    104 --ALLEa--PEVQg----------------------------kARPPEMRRL-RRTRVGVDRAA-------GTar-pGVL 142
WP_013157206 103 --ALLEs--PELKe-----------------------------KKAPKVTLA-TQTRVGINRTT-------GTaq-eGIL 140
WP_015424583 119 -------fvYDVKndlkslslvkgkeilknrGNP---------KFNPKSEEEiIEFHNMIDRIT-------GTttgsGEL 175
WP_041723888 120 --KIVDk------------------------SRS---------IGNQHYQTS-DVVRCSTNRLT-------STt--gDGF 154
WP_013886474 111 --KIID--------------------------NS---------IKKNHDEIN-ETVHCSLNRLT-------GTt--gNGF 143
4QTS_A       191 --YNIEFIKLN---EN-VE--FYFLIDYn-NEDKEfikKLEASIKLIEDEGLGGKRSIGAGFFEkV-EI---VDLPEdfn 257
WP_011698208 154 --FFEEVLFSG---ETrQQ--VFLLAP---EACKA---RLEALCGYVGASGFGSNASTGNGHFV-C-TVe--EETTL--- 213
WP_012174169 151 --FVENIKWPG---EN-QRfqIFAAAD---PACRK---RLESSLAFIGQSGFGANASTGRGSFS-F-EIk--EETAL--- 211
YP_002248479 144 apYNVGKIFFN---CD-----LVVFAGLrdDININ---SFLEILSRIGKHGYGKDATVGYGKFD-IiSW---EEIDLl-- 206
WP_013033753 159 --YFMEERWHG---KGaEKldVYLQAP---DASTE---QLRHLFATIGEQGFGRDASLGRGRFS-V-EAidtADSTL--- 222
YP_145389    143 --FTQEYLFPD---PR-TPyaLYVLGEAp--------fDLGEALAFVGEMGYGGQASLGLGRFR-VeGP---FAVELp-- 202
WP_013157206 141 --FTDRVYWLGdqeKK-QTwtVYVQIRQp----AD---YLEQALREIGTFGYGGKASVGLGRFE-VvDT---QEMDLp-- 204
WP_015424583 176 --FASSTVFYNd-----IS--FESWLDTd-YFGES---EIKEIFQFIEQNGFGKDKNTGKGKFE-I-LV---EEFHWq-- 235
WP_041723888 155 spYTVIEHFYNg-----IDfsFYFFCS---DDLKE---YVLKALEIIGEIGFGKDASVGKGKFD-V-IVgscEKVSV--- 218
WP_013886474 144 dpYSVIETVYK---KD-TFftCYFYVSE--NEHVE---KIKDALILMGKIGFGKDASIGKGRFS-VdKF---EEINF--- 207
4QTS_A       258 eiLDENSKYNnleykMLLGVGIPNKDdiknIE---YYKLIEIGGYIYS-Le--CLTKPKRNILALTEGSIVKNDFI---- 327
WP_011698208 214 --FAASGNRA-----MSLSHGVISAN-----MrraRYKQHVHFGKLGGdLakgRHSPFKYPILMASPGATFEPGDGgp-- 279
WP_012174169 212 --FAGTGNRA-----MSLSHGVITPA-----MqnpRYKLHTHYGKLGGhFatgGRSPFKYPILMARPGATFDPAGDpp-- 277
YP_002248479 207 -nTAKSPNAL-----YTLSPLCPDSA----QTekiYFNPFVRFGRHGDiLs-kSKNPFKNPVIFADEAAIVFTKAEiik- 274
WP_013033753 223 --FQYTGNRL-----LSLSHGSLTSN-----MrapRYKLHVHYGKLGGlFaggVRSPFKRPLLLLKPGATFEPAGEep-- 288
YP_145389    203 --EAKEPNAY-----ATLAPGPLEEAl--------YYEVEPYWGRLGGaYv--GARPFKRPYLRAKEGSVYRGPTH---- 261
WP_013157206 205 --EAPSPTHY-----VTLSPTLPKGEg--------YWALETYWGRLGGhYa-qAETPFKRPYLRAKEGSVFREQPT---- 264
WP_015424583 236 --DCPQNNAY-----LNLSNMVPSST----DStiaSYNSKTKFGKVGGdFa-iQKTPFKYPIYIIEPGAVFFAQGKdkk- 302
WP_041723888 219 --EKERANAV-----YTLSNCYLQGI----DArnaYYEPFTRFGKHGDiLa-iTGNPFKNPVVMARQGALIVFGEQlpsk 286
WP_013886474 208 --SHNNKNSI-----YTLGNVVLDGIn---DYkncYYEIFTRFGKHGNiLs-vTGNPYKNPVVMAKQGALITDVSDklfe 276
4QTS_A       328 ----GDVK-DISPqndddeqnknnennnKLNHKVYTHGKPILLPFN 368
WP_011698208 280 ---yGALLrDVHHd--------------PLLVHVRHHAFHLPLAFT 308
WP_012174169 278 ---fGKLLgKVHHd--------------ESLGFIRHYAFHLPTYFT 306
YP_002248479 275 -pyiGKVVrDISK----------------ALPEAVTQGYSLVIKVE 303
WP_013033753 289 ---fGEWLsDVHPd----------------HPEIGHHAWHLCLPYT 315
YP_145389    262 -----RLL-EVTPte-----------ppEAGARVWEALVVFPLGVR 290
WP_013157206 265 ----AGLL-DVTPep-----------apEGGVKIWEYLYAFPLGVR 294
WP_015424583 303 --pvGSLLsNIHP-----------------TENIVQNLYSFSIPIK 329
WP_041723888 287 -cyiGKGIkSLSF-----------------HQETVMQGYSLYIPVY 314
WP_013886474 277 kpfiGKSLkGLSY-----------------HQETVHQGYSLYVPID 305
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