Conserved Protein Domain Family
RPS4A

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COG1471: RPS4A 
Ribosomal protein S4E [Translation, ribosomal structure and biogenesis]
Ribosomal protein S4E is part of the Pathway/BioSystem: Archaeal ribosomal proteins
Statistics
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PSSM-Id: 441080
Aligned: 71 rows
Threshold Bit Score: 272.075
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM02433       9 KRHVKRLAAPYAWPIPRKEgGKFAPRPYPGPHTmDTSVPLLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPV 88 
WP_011449204   2 GHHLKRVVSPKSWGIPRKT-DKFVTKTSPGPHN-KNALPIVVWARDQMGIVRNMKEAKHVLREREIIVNGRPVRHPDMGI 79 
WP_012617147   2 SEHLKRLVAPRAWHIAKKT-NTFISKTAPGPHN-GQALPIGVWLRDTMGFAQTLKEVKQILNERSVIVNGRPCRDPKMGI 79 
WP_013330125   2 SNHMKRLTSPTGWRIAKKE-NKFVIKTAPGPHN-RNSMPMAVWLRDHMGLALNMKEVKKILKERSVILNGVPCTDSKLGI 79 
WP_007314394   2 GDHLKRLNAPDSWHVAKKT-SKFIAKTSPGPHN-ANAMPVAVWLRDHMHLAVNAKEVRQILQQKEVIINGRPCRNPRMGI 79 
WP_015286597   2 SDHLKRLNAPESWHIAKKA-NKFITKTAPGPHN-ANAMPIAVWLRDHMKLARNMKEVKQILGQKDVIVNGRPCRDPKMGI 79 
WP_008526505   2 SNHQKRLSVPNSWPIERKT-ETFTVKADAGPHG-EAGVPLLIVLRDVLGYVDSRKEARFALDQDQVLINGDPESDETRPV 79 
WP_050048929   2 TRHQKRLSVPKAWPVERKT-ETFTAKAGAGPHG-EAGVPLVVVLRDVLEYADTAKEAKYAIHHEGVLVNGDTVNDINRPI 79 
WP_070364306   2 SNHQKRLSVPKSWPVERKT-ATFTAKAAGGPHG-EDGVPLVIVLRDVLGYVDTATEATYAVNSGGVRINGDSVDDRNRPV 79 
WP_119815085   2 SNHQKRLSVPNSWPVERKT-ATFTVKAGAGPHG-ESGVPLLILLRDVLGYVGNEKEARYALRQGSVSVNGGTVSDVQRPV 79 
AAM02433      89 GIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARvKVCRIKNKTYVRGGNLQITMHDGKNWLVEiedptdpkeDVYSV 168
WP_011449204  80 GIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASsRLVKITNKTIVKGGRIQLNLRDGSNVLTD---------KQYKS 150
WP_012617147  80 GIFDIIAIPKMGKYYRILLAKNGRLVAISIEAEDAKsRLCKVQDKTIVSGGKTQVNLTYGANVLTE---------EACSP 150
WP_013330125  80 GVFDIISIPKVDKYYRILRDKKGDYVSIPISADDAKtRLCKVENKTIVKGGKIQLNLRYGANLIVDs--------QDYKP 151
WP_007314394  80 GIFDIISIPRIGRHFRILRDKKGRHKTIEIDAEAAKsRLAKIRNKTIVPGGKVQLNLRFGANVIAD---------NRYHP 150
WP_015286597  80 GIFDIIALPKINKYYRILRDRDGRHVSVEIDAEAAKtRLCKVKNKTTIAGGKVQLNLRDGANILAD---------NTYKS 150
WP_008526505  80 GMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQsKLGKIVQKQFVPGGDLQLTLHDGETLLVSed-------aPYEG 152
WP_050048929  80 GMFDIMAFPDREEYYRVFPDEGGRLGLTPIDEDAADsRLGKIDDVTLVPGGQAQLNLHDGSNVLVDe--------dGYSG 151
WP_070364306  80 GMFDILAFPERDEYYRVFPDEGGRLGLTPIDEADAGsKLGKIIGKTTVSGGRTQLNLHDGANLIVEd--------eDYSG 151
WP_119815085  80 GIFDILSFDEREEYYRVFPDEGGRLTLVPIDADAAEsRLGKVVRKGTVSGGDVQLTLHDGTNVRVEsd-------tEYSN 152
AAM02433     169 GDSLVLELPEPDsgeswkVVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVEn-PEgDQFQTTKGRLIAI 247
WP_011449204 151 GDSIVLSLKEGQkn---eIIDHFPFQPGNMAMIIGGKHSGVVGRIIEHIPVPGSLPNRVILKdeSSgESFETIDEYVVMV 227
WP_012617147 151 KDSLVLSLEPEQrf---tVLDHFPYKEGNMAMVIGGRHSGKIGKIQTITTVMGSTPNTVILEevGTgTQFDTIDSYIYMV 227
WP_013330125 152 KDSIVIGLEGDNrf---kVTDHYPFAEGSVAMIIGGSHSGKIGRISKIDTIPGSISNRVYLKdeKSgEDFDTIEEYIFVI 228
WP_007314394 151 GDSIVLSLEPENrf---aILDHFPFAVGNMAMVIGGRHSGKVARIVGIEKVPGSVPNRVILEdpADgSRFETIDEYIYMV 227
WP_015286597 151 GDSVVVSLEPENrf---kIVDHFPFVVGNMAMIIGGKHSGNVARIVDIVKMPGSVPNKIILQdeKTgTKFDTIAPYIYMV 227
WP_008526505 153 NDSIVVENDSEE------VIAHFEYEEGALVTAVDGQHAGEIGTIEEIQVTPGSAENNVRIDr-EDgSIIETIEEYVVVI 225
WP_050048929 152 NDSVVIDNETKD------IVAHFVYEEGALVTAVAGQHAGDIGNVTEINVTPGSTDNTVAVEt-DDgS-FETIEDYVVVI 223
WP_070364306 152 NDSIVLDNETNE------IVAHFVYEEGALVTAVAGQHAGEIGTVEDISVTPGSASNTVTVDt-GEgV-FETVEEYVVVI 223
WP_119815085 153 KDSLVVDNETKA------VVAHFPYEEGALAVVVDGQHAGETGTVDEIQVTMGSGSNTVRLAs-GEdT-FETVEEYVVVI 224
AAM02433     248 GK-----DEPLVTVR---------KE 259
WP_011449204 228 GR-----ESPAIDRWg-------iEE 241
WP_012617147 228 GR-----ETPVIAEWg-------iEE 241
WP_013330125 229 GT-----TEPAVKEWg-------iEA 242
WP_007314394 228 GR-----EEPALKEWg-------iEE 241
WP_015286597 228 GK-----QMPAIAKWg-------hEE 241
WP_008526505 226 DEnfvesDDEDA------------DA 239
WP_050048929 224 DEnfvddEEAET-------------- 235
WP_070364306 224 DEnfvgeDAELPTEGda--------- 240
WP_119815085 225 DEnftddEDADGVDAdeeadevdaDE 250
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