Conserved Protein Domain Family
PRI1

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COG1467: PRI1 
Eukaryotic-type DNA primase, catalytic (small) subunit [Replication, recombination and repair]
Statistics
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PSSM-Id: 441076
Aligned: 76 rows
Threshold Bit Score: 286.446
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_103286389  25 MRA----------------------YSINLLNQAFKEYYFKh---tAMVEAPDAIQEREFGYSRFD-GTMIRHLSIRDRN 78 
AFH43082       1 MSLtshqek-----------rkrsiDRKEWLFQKLSAYYEK-----AKLELPDDINSREFAVQPIDyKGYVRHLSFKSED 64 
WP_011170015   1 MNDnpa-----------------tdKVFKEVSSLYKQYFEYailvrKWLEIPDDLSHREIGYGMLK-KVDNRNMSFNTER 62 
WP_011822776   1 MPRsqd----------------pvmRTRRFLEHLTRKYYER-----ARVKLPGDFSLREFALQTWTgKSYLRHLSFASTE 59 
WP_052891595   1 MSLr--------------------dQSNIVLRNIIRNYYRK-----RPLQPPLEIHKREIALESLEdGAYLRHLSFAYMD 55 
WP_013266118   1 MEDlsstyrqgssegdqqeviirkwSEADSLKSLFAIYYRMd----PPFILPHDMAKREFALQPFDiESYIRHLAFKDET 76 
WP_014025732   1 MAV----------------------KTINYLRKLFRDYYARs---aRKLVLPEDFYAREFAAQLWGmKSYVRHLSFSSRG 55 
WP_014737134   1 MYRr--------------------eSNKQFLRRVLRQYYSR-----RPLVEPPNLHSREIALVDLEsEAYVRHLSFPSMA 55 
WP_015232064   1 MVQeerei------------kikewKGEQTIKYLYKEYYSLi----PPLILPKDIERREFAIQPFDkQSYIRHLSFDNQQ 64 
WP_055407949   1 MPSqqnlq-------------arimKTRRYLENITRDYYRK-----RQPSVPPDFRLREFAAQTWTgRSYIRHLSFQSTT 62 
WP_103286389  79 ELIALLI-MNVPADVYCSAAYYTSPTR--PMEEKGLKAADLIFDIDVKELKpRCSsmhdihlceeclepvdd--tssmcg 153
AFH43082      65 ELRSFLL-KNPPMHLYYSSAIYTFPEId-DMEKKGMIGSEIIFDIDADEVP-GCEsieqlhaclncgsllygksikkctk 141
WP_011170015  63 DYLAWVL-KESPFHLYKSLSYMEYPDIvgGAAKKGLFKREVAFDIDTHKTE-KCThd----------------------- 117
WP_011822776  60 AVHRLLV-EKAPRHFYYSSARYDQPGAd-DMDAKGWRSADLTFDIDADHLP-ECSgsivevdg----------------- 119
WP_052891595  56 RLYDYILnNKTPLHLYYSSALYENPSAq-PMEAKGWIGSELIFDIDADKYQ-GCSesyyicvkdnqvfna-----kpdsc 128
WP_013266118  77 SLRKYIR-SRTPRHLYHSVGIYELPSAp-NMEEKGWQGSELLFDIDLDHPG-ACEg------------------------ 129
WP_014025732  56 TFEQWVV-DKAPRHLYYSSAVYKHPAAq-NMDEKGWVGADLIFDIDADHLP-KCQssivevvd----------------- 115
WP_014737134  56 QLYHFIVdQKTPLHLYYSSAVYDDPSAe-NMSMKGWKGSELIFDIDVDHLP-GCDlklkvcvednsvlge-----htekc 128
WP_015232064  65 KFYDFLI-KSTPKHVYYSIGIYDLPEAn-SMEEKGWKGSDLLFDIDLDHDK-SCQtq----------------------- 118
WP_055407949  63 AIHKFLV-EKAPRHFYYSSARYDQPGId-DMDAKGWRSADIVFDIDADHLP-ECSnmvvevet----------------- 122
WP_103286389 154 cgsrrvnhvtIPCDECISLGKREVKKLAG-MLEDDFGVDEDNIKVYFSGNYGFHVYVKGR-------YTLLDSAARSEVV 225
AFH43082     142 cgsqnvievePIPKECILKAGIEAKKLIK-VLRKDFGF--EKIKIYFSGNRGFHVHPKCDd-----eWLKLTSEERSMII 213
WP_011170015 118 --------dsWICEECLGEARNQVLILIEdFLFPDFGLDEKDLKIVFTGNRGYHIYLKPEdpellkrIEKWGKNERRYFI 189
WP_011822776 120 --giegktsfIEEALCMRAAALRAQILYD-ILVYELGFDKSRIAIEFSGHRGFHVTVYLDdf---ddYAKAGSDVRREIV 193
WP_052891595 129 esggkpleipLVSWNCIKRALQDAVKLRD-ILMTDLGF--KDVKIFFSGNRGFHVRISDEa------VLALNSEERRLIA 199
WP_013266118 130 ---------qIVDDECLVKGFDSARLVSR-IVRDLLG---GKPLIYFTGHRGFHIRGICEq------CMQLGRDERREIA 190
WP_014025732 116 --ekvgvkasFAPAECVREAAWEAVKLFD-VLVYELGFDKSRVYIEFSGHRGFHVTVRCKei---veCFEADSQVRKEIL 189
WP_014737134 129 psgsepvevsVIEPECFRKGLGEASKLRE-ILEEDFGF--KDVKVYFSGHRGFHVRVSDDs------ALDLTREARASIA 199
WP_015232064 119 --------ddITDDLCIEKGLKYAETIAS-MINNYFG---GYHQIYFTGNRGYHVRGICEn------CRLLGREERAEIA 180
WP_055407949 123 ---plgekasFIDEKCIRYAALRSIILRD-ILVEEIGIDEKKIVVEFSGNRGFHVTVYLQdt---deLARAGPDVRRELV 195
WP_103286389 226 NYLLGRGVADairKRy----------GRKVree------irgKGKSKRGKRSIERDKDKGKKdddsnnattAAIYGYDDL 289
AFH43082     214 KYITGSGVNI---ERiiglg--esikGKNmyip-----npkePGWRGRLGEILYKKMNLNDE------------------ 265
WP_011170015 190 EYILGKNLNL---RNm-------------------------gSRWKNILVREFNK--NKIAT------------------ 221
WP_011822776 194 NYVKALGLRA---DVlepwtmlqvrrGKPipipp----nvqlAGARGRVARIIRRLALRDGAi---------------DI 251
WP_052891595 200 DYVSCENLDQ---ERvfptqkfkre--------ervvfsnveYGLRRRVKDEAGKAGILRKD------------------ 250
WP_013266118 191 KLVRAEGLDA---SLlfp-----nkrGVRpapa-----tpedPGWRGLAASL--------------------------GV 231
WP_014025732 190 DYVRAESFDE---QRvmqhvdsevgrGRKRvklfelppsirdAGVRGRIARIIRRMALRRGD----------------SV 250
WP_014737134 200 DYVSCENMDV---SRlfpsdtssra--------gfvyfgeneAGFRKRVLKLALEMGLAEKV---------VVAEGFR-- 257
WP_015232064 181 KFVMAQDLDL---EIifpk----sskGKKsapp-----spkdPGWRGLIASYGIKEVD--------------------AV 228
WP_055407949 196 NYIKAVGLLD---EIlepwrglnlrkGRPspvpp----siilAGARGRLARIMYRLAEASGRr---------------DL 253
WP_103286389 290 khsdgnsnsnsndgsivyiprSILaADGGYGWi--GRIgrylaaSAHVSMKS--IEDAILALSVRIDPNVTIDMHRIFRL 365
AFH43082     266 ---------------------KKItFGE----------------AEVLLGEKinLNDIMKMASISIDEKVTVDVHRLIRI 308
WP_011170015 222 ---------------------KKFeKTSDWKTe-iDNRkd---tTRRTIYET--IDK--VKSRLELDEKVMDDDIRLLRT 272
WP_011822776 252 v--------------------KAVeGPSt--------------tYSEELREY--EDKARQLIGVEIDEQVSVDVKRLIRV 295
WP_052891595 251 ----------------------RLrNEE----------------VFTISVDE--LLQILPSVCVTIDKVVTMDLSRLSRF 290
WP_013266118 232 d-----------------------------------------------------LRASGPHVGVDIDSMVTEDPSRLTRI 258
WP_014025732 251 v-------------------vRIV-SSEPLEAaalYRR------NRELFEEY--LSIAFSEIRVEVDPQVTVDTKRLIRI 302
WP_014737134 258 ---------------------SPPrHSE-------RGV------LYRVPGEY--LSNILSDLCVKVDKVVTMDITRLSRF 301
WP_015232064 229 e-----------------------------------------------------IKNAIENIRVEIDSMVTQDPSRLTRI 255
WP_055407949 254 a--------------------RLLaGREPIDya----------vYQKQFAEL--EVRARELLGVEIDEQVTVDTRRLIRA 301
WP_103286389 366 PGTLNSKSSLAKVPLPRlSDID--SFNP--LIDAC--LISD-REVDVYVIN--A-PRFTLKGNSFGPYTHeEVKLPLYAA 435
AFH43082     309 PGSINGKLGLPVFEIGE-SELE--SFS---INCSYs-PFKEdEDVKMNVSM----QNKEILGIKINSLKGdIIKIPGCLA 377
WP_011170015 273 IGSLHGYTGLMVKEITY-NSLKnnQFDP--LNHGVfsKFHK-KMYNVKIKQ--ElDPLTLKGDTFD---HnSTEIPASYL 343
WP_011822776 296 PYSINGKTGLLVKPVTV-DELD--EFV---VDETLs-PFARePPVRIRVVTslP-SSVTILGNRLKLREGdSPRLPAPVA 367
WP_052891595 291 VGSLNCKSGLKVVEV---TDVS--KFMDytYKDLS--PFKG--KISITPLV--DfPGLPIYGNRIDLRRGvKVELDAEDA 359
WP_013266118 259 PGSLNAKGGLIVTPLCD-------SFAP---GPQIs-PFRG--TLDAKATK--DlDPTRILGFEVSLTEGeELSLPASVA 323
WP_014025732 303 PYSLHGKTGLPVIPLDV-NRVD--KFE---LSDDLs-PFKRlGDVRVRALV--StPTIEVLSQRLKLEAGeEYKLPAPVA 373
WP_014737134 302 EGGINGKAGLKVAEFKE-DE----PFS---FTELF--AWSG--RVVVSPLI--DfTGFRVFDQKLNLKRGvRLELEAPYA 367
WP_015232064 256 PGTLNGKSSLLVVPICG-------EFK---LGKWLs-PFYG--EIEVKALK--DlQKLKILGINIEFRKNeELSIPSQHA 320
WP_055407949 302 PWSINGKTGLLVVPVEY-TSLY--EFS---ISERLs-PFTDlDPIRIEVIAdvP-SNITVLGNRIRLRRGdKPRLPAPVA 373
WP_103286389 436 SYLICKGIAYAKRK 449
AFH43082     378 FLFISKGIADPA-- 389
WP_011170015 344 LFLFGHGIDFEILE 357
WP_011822776 368 VYLMAKGVAVLAQ- 380
WP_052891595 360 LYVVLKGLANIYSI 373
WP_013266118 324 LYLYLSGYVSIIGG 337
WP_014025732 374 VYLLCKEVAVLAGE 387
WP_014737134 368 IYLILKKLANYVSD 381
WP_015232064 321 IYLATKGYLNILGG 334
WP_055407949 374 VYLLSKGVAVVA-- 385
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