2VUG


Conserved Protein Domain Family
COG1423

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COG1423: COG1423 
ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family [Replication, recombination and repair]
Statistics
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PSSM-Id: 441033
Aligned: 57 rows
Threshold Bit Score: 407.667
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VUG_A        16 YKEILVKLGLTEDRIETLEMKggIIEDEFDGIRYVRFKDSAGKLRRGTVVIdeeYVIPGFPHIKRIINLRSGIRRIFkRG 95 
WP_011630286   1 ---------mdALTAKTALEKgkASRHEFEGLHYIRLHDSVARLPKGSVRLddgTVVPGYPSIGRIQALGPGLAKQYgDE 71 
WP_011813781   1 --------mpEASLVEDALARnkARHEHYAGLDYVRLTDGFSGWPRGTVFLd-gRAVPGYPSIGRVLNLEQGLAQHF-RA 70 
WP_012462350   1 ---------myEQLIEEILQSkkGQLGRFWEYSYVRLTHAYKGWPEGTVFLk-dLAIAGFPKIGRINSLEPGLREQF-PS 69 
WP_041354752   1 -mqKLDRTL--KNSLHQAKAKgrLRRERFGDLVYHRLADDSRPLTRGTVIFedgTLIPGYPQIGRVMRLDKGLKEQF-RG 76 
WP_012963941   1 --------mIDAQIVKEALKKnkVRTEVFKDIEYLRFTDDYKDIPRGTAIFk-dFVVWGYPHIGRIFQLTTGLPEQF-NA 70 
WP_015259639   1 ---------mdGPTLADAIDAgrAERLCFEGLEYARLTETVAGYPRGSVVLpggVVIPGYPSIGRVHSLSAGLREQF-DG 70 
WP_068548553   1 ----mDRVELGKRFFESLKDKkrVAEEEFEGIRYYRLKDDYRAFLRGTVYVn-gEIIVGYPRIPRILSLSAGLKNV--SQ 73 
WP_119632980   1 ------------------mQSgkAADAESGGLRYVRFVHDFEDIARGTVIFd-hGTVYGYPAIGRLLALRTGLAKQL-SG 60 
WP_099324972   3 LTEVIKKAGISEDRWQESIDKhdVAREEYEGISYYRIMRKVGPLGKCSIVTc-aGIIFDFPRIARILHLENGLKNAY-AQ 80 
2VUG_A        96 EFYVEEKVDGYNVRVVMYKGKMLGITRGGFICPFTTERIPDFVP-QE-FFKDNPNLILVGEMAGPESPYLVEGPPYVKeD 173
WP_011630286  72 LFWAEEKIDGFNIRILAHQGRLLAFSRGGYLCPFSTDRVPELLD-PT-LFDDHPGLILCAELAGPENPYMEGSPPHVTeD 149
WP_011813781  71 PFHAEEKIDGFNVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLID-PA-VFQAEPDLVLCAEVAGPGNPYLEGHPPEIHeD 148
WP_012462350  70 SFWMEEKVDGYNVRIFQYKGKILCATRGGFLCPFSTDRIGELMP-LG-IFNDHPSLVLCGEIAGPDNPYIEGPSPLVQeD 147
WP_041354752  77 SFWAEEKVDGYNVRIFLLGERLLGVTRGGFLCPFTVDRLPDLID-RR-IFSEHPELTLCAEIAGPENPYLVGSPPFIQeD 154
WP_012963941  71 PVWVEEKVDGYNTRIFSYKGEIYTLTRGGYICPFTTDRVREFIS-EK-FFEENPHLVLCAEVAGPENPYVEEFPPYIQeD 148
WP_015259639  71 PFWAEEKIDGFNVRILRHEGAVLAFSRGGFVCPFSTDRLHDFID-PA-LFEIEPDLVLCAEIAGPENPYLEGSPPFVTeD 148
WP_068548553  74 PFWMEEKADGYNVRIAKVGERILAFTRGGYVCPFTTDRLVDFAD-FEgFFRDNPHLVIAGEVVGRNTPYTELCPRYVDkE 152
WP_119632980  61 PFWMEEKIHGFNIRVTRIEDGLIALTRGGYVCPFTNDRLPDLLD-TA-IFDDQPDLVLCAEVAGPDNPYLESAPPFITeD 138
WP_099324972  81 PFYVEEKVDGYNVRIVCIRGKVLVFSRGGYVCPFSTDRIADFLDiQK-IFADHPDLIVCGEFAGPDNPYNIECPPYVKeD 159
2VUG_A       174 IQFFLFDVQEiKTGRSLPVEERLKiAEEYGINHVEVFGKY--TKDDVDELYQLIERLSKEGREGIIMKSPDMK-KIVKYV 250
WP_011630286 150 VALFVFDIRRaGANGFLPQEEKLAlAERYRLPLARVFGRY--RADDQQALHALILELDEAGCEGLVFKGETRg-ARSKYV 226
WP_011813781 149 VALLVFDLMRwDHAEFMAVEERRAlLQEHGLPEVPYHGRF--TVDQAGALRELIAGLDARGVEGVVLKEEGDRrKRAKYV 226
WP_012462350 148 IKLFIFDIAQlPTLEFLPQRQKQElICRYGLPSVKNFGLFknNGNDLVEIKKILLCLHNEYREGAVFKEEPFg-RYAKYV 226
WP_041354752 155 IQLFVFDGQRkGELDYLSQTEKRQlIEHYHLPSVQNFGCF--KAEDLSAIKQLMIRLNNEGREGLVFKEDIPGgKQSKYV 232
WP_012963941 149 IAFFVFDIMKkGEQGFLPYREKLRiIDKYGLPHVEMFGRF--ELTQIEEIKRLLKKLNQEKREGVVFKEDAERdKRVKYI 226
WP_015259639 149 IALYVFDMMRqGRGSFLGQQEKMGlIASHGLPPTRTFGRF--EPHDVDPLRDLIFQLDAEGAEGLVLKGEWGg-KRAKYV 225
WP_068548553 153 VAFFAFDVFEkNNWRFWAPEERYElLSRYDIPQVCWWGPF--TRQDLDKMKDILVRLNEEGCEGVVIKGASg--RRMKYV 228
WP_119632980 139 VRLFVFDLMRrNSPRFLPQDEKMElSRRYALPSVEIFGRF--ETSDLKPISDILKRLDEEGREGAVFKEDSPRqRRTKHV 216
WP_099324972 160 IRFFAFDLMLkNTSRNLPVEERLRiFDKYGMPTVRRFGRF--SSADILALKEIVKELDDAGSEGIVFKPTCKEeKTLKYV 237
2VUG_A       251 TPYANINDIKIGARVFYELPPGYFTSRISRLAFYLAEKRIKGEefERVAKELGSALLQPFVESIFDVEQEEDIHELFKVR 330
WP_011630286 227 TARSNITDIALVSDALLDLPPEYFTHRLMRLALFESEH-RGDD--TALEQELGRALLRGLGRAVERSRSVGRVGHRYRCR 303
WP_011813781 227 TPASVVQDLGAMGDALLDLPPEYFTNRLMRLVLILEESPELDR--ETLRAELGAALIDPLLNAAREHRETHKVAHHFCSR 304
WP_012462350 227 TAHSDLNDIAVLSHKIMDISPNYFIDRILRYVLFLIDMGIIEE--NGWDEKLGKAFISSIKEVLKRVKEGGKSSRLFRCR 304
WP_041354752 233 TSEASLSDIEAMTRYLQDLPPEYFIGRILRLVMFLDEEGIGNT--RELKTQLGAAFVEGVFKAIEQCQRENRVYHRFRCR 310
WP_012963941 227 TSYANINDIKVTSLNMLGLPADYYTNRLLRLALFIEEEQVEKN--ESLYKEIGEAFLEGIFKACQMVRSEGKVYRTFRCR 304
WP_015259639 226 TGRSNVTDIRVCSEQLLDLPPEYFINRLTRLAIFVTEHGQQGD--PELERSLGHAFLSGLDRAVERSRSRGRVDHRYRCR 303
WP_068548553 229 LPNINVQDIEVSSFQMLELPPEFFTQRIVRLVLASKELGIPLS--DEIYRVLGRGFCEGLSEAVESFRERGKVVYRYTLR 306
WP_119632980 217 TGSANLSDIRNSVYSLLDLSPEYFTSRILRLALFVDEQELEGS--DDLNRRAGAAFLDGLQEAIRRHHREGRVSHRFRCR 294
WP_099324972 238 TFGSCLRDIRCNAPLMAEIASEYFTHRIIRAAMYRYEQSHELN--PKDFTALGEALLKPIYESVKKAADGELIREEFLLR 315
2VUG_A       331 vKRIETAYKMVTHFEKLGL--KIEIv--dIEEI-KDGWRITFKRLYPDATNEIRELIGGKAF 387
WP_011630286 304 fREKRNLEHFVAHLEATGGpqHVKIlyqpTHQE-DGYWVLEFERVLPRMTGTLAHSLSGGAQ 364
WP_011813781 305 fRHRANAERFAEHLRRVPQs-QIHTtvrsLEQAaDGYWELRFDRVFPRISGLLGNFLSGGQV 365
WP_012462350 305 fRNPQNAQYLIDHLKHIPGh-QEHVivkkFYKD-KDYWYLEFEKIFPATGDSLRNWLSGALR 364
WP_041354752 311 lRNRSNGRQLLAHLGRGDG--HLQIvehrLEQE-GEFYVLEFDKVFQRTTGLLGELLSGGVV 369
WP_012963941 305 fNKKENALLFLEQMKHASA--HIQIaersLEKK-GRYYLLEFDKVFLNMTGLLGHLLKGGSV 363
WP_015259639 304 fRERRNALHFMDHMAATGGh-RVRMapgmPVQQ-DGYWILEFERVFDRMTGTLATALSGAVQ 363
WP_068548553 307 fINRERARALVDIMNRVSR--VVRArilsEERE-GGYWKVVIEKDFMKSTGKLASIFGGSLF 365
WP_119632980 295 fRDPENAGHLIRYLKRASG--HVQIvkrdLKPD-GEFWLLEFDRIYPSLNGLLSDWLAGKVV 353
WP_099324972 316 fREEENIQRMMDHLQKRKV--HFEIl--sKEKA-GFYWQVRFARKCYASYDTLQSHLGGMAH 372
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