4N2P,1JW3


Conserved Protein Domain Family
ARCH

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COG1371: ARCH 
Archease, activates RNA ligation by RtcB (tRNA splicing) [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440982
Aligned: 192 rows
Threshold Bit Score: 85.2282
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4N2P_A         3 KKWEHYEHTADIGIRGYGDSLEEAFEAVAIALFDVXV-NVNK-------------------------------------- 43 
YP_145011      1 MVVRPLDHTADVGFALEAQSLEELFQAALKGLLDVMF-TAPP-------------------------------------- 41 
WP_013130684   4 SGYRAIPRAAGLVVEAWGDSREECLAEAVRAVVDSFA-EIGD-------------------------------------- 44 
WP_013131091  17 RGHRTLPHTADMRVAAWAPTRAECIAEAVLGVAESFT-DLGG-------------------------------------- 57 
WP_013456918   2 ARLRMLEHTADVGFEVEADSLAGVFEAAADALLRVLF-EGGLp------------------------------------- 43 
WP_013703009   1 -mIRMLDHTADVGFEVRAPTREALFETAREGLLRLMF-QHPP-------------------------------------- 40 
NP_217146     45 SGHRSVPHTADLRIEAWAPTRDGCIRQAVLGTVESFL-DLES-------------------------------------- 85 
WP_088819616   4 KKFEYQSHTADVEFLAYGRSFEKVLGNSILAMANTIA-NTRR-------------------------------------- 44 
WP_091795541  11 AGYRP-AHAADLHITAWALTREGCFAQVLAALTDSWV-RPRP-------------------------------------- 50 
WP_013496468  49 GRWGAIDHTADVAFWVEAPTLPGLFHTATVAVLGILLeRPPQvalaraaalapaqpagtapvgpspvaagppatpagagh 128
4N2P_A        44 ---------VEK-K-------EVREIEVE----AEDLEALLYSFLEELLVIHDIEGLVFRDFE-V----KIERvN----- 92 
YP_145011     42 ---------QGG-R-------KRRHLRLF----AEDLETLLVRFLNELIYLIQTKGFVPGRAR-I----RVEE-Ee---- 90 
WP_013130684  45 ---------AVP-D-------GSVEFALA----VRDDDALLLTVLDEVIDQIQVEERVPVDVS-IdegtGIAM-G----- 96 
WP_013131091  58 ---------DPPcR-------GAETLHLE----PGPPEDQLLAALDEVIFQLDTTARVPFRAE-A----REEE-N----- 106
WP_013456918  44 ---------RRG-R-------RTERLALT----APDLETLMVRWLDELIYRVQTRGEVPVRTR-V----RLGK-Vp---- 92 
WP_013703009  41 ---------TQG-S-------ATREVTLQ----APDLEFLLVRWLNELIYLVQTAGFVPARAA-I----TITE-Da---- 89 
NP_217146     86 ---------AHA-V-------HTRLRRLT----ADRDDDLLVAVLEEVIYLLDTVGETPVDLR-L----RDVD-G----- 133
WP_088819616  45 ---------INA-DarkwdsiKVYHIKLTerseKGSYLDLLWYVLQDALSIADYRGLFIFRVSsI----EMHN-Gk---- 105
WP_091795541  51 ---------RTA-T-------ATAQHEVR----AGTDDELLAGVLGCVIARIRSLGQVPVSTR-V----NVIP-G----- 98 
WP_013496468 129 rhqpespaaSSA-E-------EHPAVHLT----APDIETLLVRWINELLYWVQDRRRVPVALA-W----DLRP-Apaaaa 190
4N2P_A        93 --------------------------------------GKYRLRAKAYGEKLDLKKHEPKEEVKAITYHDXKI-ERlP-N 132
YP_145011     91 --------------------------------------GGYRLTATLFGEPFQ-ERFGFQGEVKSATFHGLSV-RK-E-D 128
WP_013130684  97 -----------------------------------------EFEIRLATVPLE-AVREVGALPEAVQPAGSWF-RR-E-S 131
WP_013131091 107 -----------------------------------------GISLRLWHTELG-AVTQTGASPKGIALENLRF-EQ-GpD 142
WP_013456918  93 --------------------------------------EGQRLEAELDLLLFEEVQDRFAGEVKAATYHGLVV-EG-A-D 131
WP_013703009  90 --------------------------------------QGFTLRARLEGQPFDAEAMGWQGEIKSATFHGLEV-RP-E-T 128
NP_217146    134 -----------------------------------------GVDVTFATTDAS-TLVQVGAVPKAVSLNELRF-SQ-G-R 168
WP_088819616 106 --------------------------------------TKDNVRVEL--DAVKKQDKYSYIEVKGVSKYNMSL-KF-A-D 142
WP_091795541  99 -----------------------------------------GLRVTSAVADLS-AIVSSGPIPKRVSAPHCRC-TR-G-D 133
WP_013496468 191 agrgaaagqpehggpggagrsprpedpcrepsqdaerpGNWTLDVAGRWIPLDPDAMGWQGEIKAATYHQLEVvRR-P-G 268
4N2P_A       133 GKWXAQLVPDI 143
YP_145011    129 GRWKAQVILDV 139
WP_013130684 132 GVWRAHALIEV 142
WP_013131091 143 GTWTCEVTVDV 153
WP_013456918 132 GRFRARVILDV 142
WP_013703009 129 SGWWARVVLDV 139
NP_217146    169 HGWRCAVTLDV 179
WP_088819616 143 GVYKADIVIDV 153
WP_091795541 134 RMWCCTARIDL 144
WP_013496468 269 GDWRAQVVLDV 279
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