4QTS


Conserved Protein Domain Family
Csm3

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COG1337: Csm3 
CRISPR-Cas system type III CSM-effector complex subunit Csm3, RAMP superfamily Cas7 group [Defense mechanisms]
CRISPR-Cas system type III CSM-effector complex subunit Csm3, RAMP superfamily Cas7 group is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 440948
Aligned: 269 rows
Threshold Bit Score: 61.9756
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4QTS_C        26 L-KGKVILe------------------------gIIELE----T-GMHIGGTK-Etlk------iggTDN---------- 58 
WP_011278846   1 -----------------------------------MKVE----SeLLHVGGGKyTislnkg-iskkdVDQwi-------- 32 
YP_426236     86 I-TAPFRFvglaetvvqadgptdikvpldggvcaTIDVEwaveS-PLLIGE----------------DDK---------- 137
YP_426237      1 MsRLRFDIe------------------------gKVTAL----S-PLHVGTGDfTtiegl--sgkagANAapq------- 42 
WP_012463218   1 M----SRFt------------------------lEIELL----E-DLHIGAGIgw----------gdIDA---------- 27 
WP_009942502   1 M-KV-TLIt------------------------aRLRFE----T-AGGVGGTEag-----------aGENgy-------- 30 
WP_083778938  42 A-RLAAMLdqvi-------------------lcgQLEAL----S-PLHVGTGD-FtplaqlfendsrKLShlaaddrgrg 95 
WP_043575602   1 M-KS-ALFs------------------------lRLRML----T-PGGVTAPEal-----------yAPQnt-------- 30 
WP_100923249   8 K----RRFr------------------------lVIELL----E-DLHTGCGTgs----------gvVDR---------- 34 
WP_126450532   1 M---------------------------------ELEVV----SdYLHVGQGKrEvllk----pvndVEAmv-------- 31 
4QTS_C        59 ----PVI------RDA--F-----------------GRIL-IPGSSLKGKIRALLERK----D-----------G----- 88 
WP_011278846  33 ---dSVL------KGsvpdlsgyfnppihefnkysdGRLV-IPGATIKGMVRTRLELS----Ip----------D----- 83 
YP_426236    138 ----GIVspmklsGDG--Pe----------------AR-YiIPGATLRGLTRAAVEIVahgrLgfvnahhrygvRdfehr 194
YP_426237     43 --vaRIA------RDA--M-----------------ARPM-IPSTALKGVLLTLARSL----V-----------D----- 74 
WP_012463218  28 ----LQV------RDR--L-----------------GRPV-LPSSHIKGVMRSAALEW----H-----------R----- 57 
WP_009942502  31 --lqPIR------RDP--Apkg-----------kakGKVS-LPGTTIAGSLRAHCAAF---------------------- 66 
WP_083778938  96 alvaTIV------RDH--E-----------------NRPC-LSATAIKGCLRAACRA-----V-----------G----- 128
WP_043575602  31 ---vPLR------RDh-------------------nNDVH-LPGSTLAGSLREHCARY----T-----------E----- 61 
WP_100923249  35 ----ALA------RDP--D-----------------GRPI-IPRSHLQGIWRDNGERL----L-----------A----- 64 
WP_126450532  32 ---rQYLe-----RGQ--LpdlddhfvrgnpfmrvaGRLT-VPGSTLKGAVRTRLEMS----Ik----------D----- 81 
4QTS_C        89 -----KykedgrgnyL--Ph------------------------------------------------------------ 101
WP_011278846  84 -----Sc-------yVv-Nrqsnysspryin------------------------------------------------- 101
YP_426236    195 hygadSg--------I--Snvanvkagwlectgdvedpdasvwtlspvenwshipidtvlaliknkggdrfkwigmsled 264
YP_426237     75 ---------------V--S------------------------------------------------------------- 76 
WP_012463218  58 ---------------F--Dpq----------------------------------------------------------- 61 
WP_009942502  67 ------------------D------------------------------------------------------------- 67 
WP_083778938 129 -----W---------D--Ql------------------------------------------------------------ 132
WP_043575602  62 ---------------LhpT------------------------------------------------------------- 65 
WP_100923249  65 ---------------I--Setsd--------------------------------------------------------- 70 
WP_126450532  82 -----Ac-------yVtgNqrgvssspryrqifrpd-------------------------------------------- 105
4QTS_C           --------------------------------------------------------------------------------    
WP_011278846     --------------------------------------------------------------------------------    
YP_426236    265 kysasgqkvtggefdftrtvtlspprtqsidvkgntfsreicaagqglegvlvfsdkvpfvsrpkneaedkmkkyeyvfh 344
YP_426237        --------------------------------------------------------------------------------    
WP_012463218     --------------------------------------------------------------------------------    
WP_009942502     --------------------------------------------------------------------------------    
WP_083778938     --------------------------------------------------------------------------------    
WP_043575602     --------------------------------------------------------------------------------    
WP_100923249     --------------------------------------------------------------------------------    
WP_126450532     --------------------------------------------------------------------------------    
4QTS_C           --------------------------------------------------------------------------------    
WP_011278846 102 -----------------------------------------------------------------------ifrpafrry 110
YP_426236    345 gavgaphplhpsdvaafqrlnstpsdnkptptgtykkllptlkarrrvpvfyvgelpasndkdhpqrapkefffgftrlf 424
YP_426237        --------------------------------------------------------------------------------    
WP_012463218     --------------------------------------------------------------------------------    
WP_009942502     --------------------------------------------------------------------------------    
WP_083778938     --------------------------------------------------------------------------------    
WP_043575602     --------------------------------------------------------------------------------    
WP_100923249     --------------------------------------------------------------------------------    
WP_126450532 106 --------------------------------------------------------------------pnrgsdnylsgr 117
4QTS_C       102 ---DCGE-------C-E---ICK-----------IFGph---dS---K--NI-------------------------K-E 122
WP_011278846 111 yhkFPQV-------C-V---VDD-----------LLG------T---A-----------------------------K-L 129
YP_426236    425 kiphTQSvgevlkeSrPnhwITEgqdhspdfvedLFGyviepkQlgyA--AEert-------------------dvkA-V 482
YP_426237     77 ----DE----------T---LEA-----------LFG------Ti-kAetGAdde--------------------psGrM 101
WP_012463218  62 ----siS-------CqQ---IDE-----------LFG------C---A--GK---------------------------K 78 
WP_009942502  68 ----AG--------------LGD-----------LFG------D---T--PEqladkhgkaeamrrsqkrndekperA-M 106
WP_083778938 133 ----------------D---IKH-----------LFG------E---A--REse---------------------dvG-A 149
WP_043575602  66 ----EK--------------LSE-----------LFG------P---A--Pean---------------------erR-A 83 
WP_100923249  71 --ldliT-------QdR---WQA-----------LFG------M---A--GG---------------------------Q 89 
WP_126450532 118 aikgNAV-------C-P---VCD-----------LMG------S---P-----------------------------G-L 136
4QTS_C       123 P--VRV--------IVRDAY-LQP-----------------------------------------EEnkkdydYL----E 146
WP_011278846 130 A--SRV--------NFTDFV-G---------------------------------------------------------- 140
YP_426236    483 ArrGRV--------AFSMAk-INPrqtpkvtekittvmmaprasfapfylaalghpgeldysapeKS------VTlagrK 547
YP_426237    102 ---GAV--------TVFSAYrV-------------------------------------------SE------AV----D 117
WP_012463218  79 Q--GKL--------QLTGAY-CDAq---------------------------------------qVP------KA----- 97 
WP_009942502 107 P--SAI--------QVLGTL-LHR-----------------------------------------RG------ETf---S 125
WP_083778938 150 M--AKV--------LLRLAN-MDGleqyfpper------------------------tplpyyrhEA------LS----Y 184
WP_043575602  84 A--SPV--------GVLGTL-LRS-----------------------------------------GR------ETs---P 102
WP_100923249  90 R--GCLiapelkpiADQGAV-SDPp---------------------------------------sSP------AT----- 116
WP_126450532 137 A--SRV--------SFSDAY-Y---------------------------------------------------------- 147
4QTS_C       147 --I------K------V---ENTIDRLKGtTik-gGIRNME----------RV-VA-GSK--FKFEVVfniY--KEs--- 189
WP_011278846 141 ----------------S---NVKVKKVNIn------nEDYE----------CA-EK-GST--FTGKVL---F--RSi--r 174
YP_426236    548 ryLp-----Rf-----TkggSSTVSAVSArAeeqrSRLQANnadvvstlrfLTpPAaGDDllFTSRIR---L--TNv--- 609
YP_426237    118 --VscypygRdgcfvaA---RTSIDGASGvAan-aKLFHQE----------MV-AP-GTT--FGFRCR---IeaRGaava 174
WP_012463218  98 --Li-----------wG---STRISPRSGtAde-gSLRFFE----------YI-PA-GSR--FRMEAM---L--PDg--- 138
WP_009942502 126 ---------H------T---RNSSDRKRGaArt-hHFHRVE----------ML-ET-GTE--FDVVLR---W--DNa--- 164
WP_083778938 185 --I------Q------T---RIRVDHDAGvAad-kYLFFQE----------MV-PQ-GVR--FRFRAV---Frgaw-eec 228
WP_043575602 103 ---------A------K---RTSIDRKRGaAan-tELHHTE----------LL-AT-GTE--FDVVLR---W--DRp--- 141
WP_100923249 117 --Ld-----------wN---ATARRTGSRvPdd-hSLRRTE----------YL-PA-GTC--LAGIGY---L--NSd--- 157
WP_126450532 148 ----------------V---SGQVVNVTNke----dgSSYE----------VA-KR-GSK--FRGEVL---Lw------g 181
4QTS_C       190 DKE-LIKKFIEGMKLL----E-------DDYLGGSGSRG--YGKIKFRD--IKLickpkeYYEGnENS-----KK----- 243
WP_011278846 175 RPE-EIGMLLYGFGFRl--vNgkl-qqkIQLLGRFKYIDkrFGRVSFSI--RSS------SLTg---------------- 226
YP_426236    610 TPv-ELGAVLFALTHGgdpaKp-----yRHMIGRGKPFG--AGQTRINaarLTV------TANDtKAE-----ALiqppe 670
YP_426237    175 SAKgHLEALLPILSALt---De-----nGVPVGKGQADG--FGRLRLDg--KSL------KISQwSLDgegryKDkphp- 235
WP_012463218 139 ETQ-----LLELFKAI----Va-----rTDSLGSGRQRG--NGRIR-----WSW-------TEQaPHA-----TPvpr-- 183
WP_009942502 165 DEE----LLERFLDVL----Kq-----wHPTLGRGVTRG--AGRCSLVg--WGR------VDYDlDSP-----DGlmawl 216
WP_083778938 229 Q-----QKLLPALALLg---Rh-----qGVALGKGYTLG--NGRIRLVp--DSL------QARVvGFD-----Alrc--- 277
WP_043575602 142 DER-----LDTFLRAL----Re-----wRPSIGRGASHG--AGKCEVIg--LGH------RVYDlADS-----ADlldwi 192
WP_100923249 158 DPQ-----LALAFAQV----Rr-----mTDRLGSERTRG--SGLIRIAd--FQW------LAADaGFA-----PAdpn-- 206
WP_126450532 182 SAL-DLGMVLYGLGVRc---SqgrpfskTILLGRFKYDVpqFGRVKFST--------------DvKD------------- 230
4QTS_C       244 --------------------------------------------ESDEVESLNELESEL 258
WP_011278846 227 -------------------------------------------gKIDLSQALQKFVSSY 242
YP_426236    671 gddlvaenglrgfcpapqpnrpshahrpflkafethmrqalkqpAFPAVPAIQEFLGAS 729
YP_426237    236 -----------------------------------------valKAAKRRKVDGrwrlg 253
WP_012463218 184 ------------------------------------------ekASGTPCRLRLLLRNL 200
WP_009942502 217 nterrpnpaetpetrsaetyaldvdlsivdaihcgtelnsvngpkhntltafrhgeefv 275
WP_083778938 278 ---------------------------------------------------lpTVGAKT 285
WP_043575602 193 gltspedyptaqpctadaaddrlidvelrivdglhigtgetetdseterernpalkrdg 251
WP_100923249 207 ------------------------------------------qpATG----LRLLLRAL 219
WP_126450532 231 -----------------------------------------------PCTPLGQFVKKF 242
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