Conserved Protein Domain Family
RaSEA

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COG1244: RaSEA 
Archaeosine formation enzyme, radical SAM superfamily [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440857
Aligned: 68 rows
Threshold Bit Score: 248.706
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015924480   1 MF--------------------------------IddvIAKIweps---yieYKRIYDKAMN-----------TDTDKLF 34 
NP_149336      1 MEl-------------------------------LksdKNKIlt-------hFNEVLKIKKRnln------refSFDKVA 36 
WP_012375773   1 MAs-------------------------------------vVpse-----drTAWILAQRPArtr-------tpDPNAPH 31 
WP_015924502   1 ML--------------------------------IddiMGKIwekn---ytqYKKIYDDAIE-----------TDTNKLF 34 
WP_012844563   1 MNel---------------------------------tRWETltp----larTRLIRRLRPPra--------pvDPECPY 35 
WP_062153583   1 MPdlvdss------------------------------------------------------------fnikttPPTRP- 19 
WP_082845980   1 MNavrs------------------------kpvgRgisPSTVpap----rytTEQILAARGDrn--------dvAADRPY 44 
WP_083713741   1 M-------------------------------------------------------LDRRPArn--------vlDPLRPY 17 
WP_077027778   1 MNd--------------------------------------------------vDILAARGPkn--------svDPFRAY 22 
WP_014868284   1 MSwqgrttiagavhpdrgcvlreggisilqrtvsDsssGAEIfgglptdndvLERVRGLAGRlrrengslpenLDFTVPI 80 
WP_015924480  35 HTLAGQ--KMSTiyyPNGLTMSVLATSGCPHRFredrISGCSMCNYQSYFFNTyasmaALKKKDInlyAKAVRLSFENAR 112
NP_149336     37 NSTINKg-YLNGs--KIDRIIFYLRSTGCEWSCt--kMGGCFMCGHYFGTNMGd----TLPKNSF---YNQFLSEYNKYD 104
WP_012375773  32 GVFLERe-RLASg-eVVDTGVVLLTNRECPWK--------CLMCDLWKDTTRE-----TVPAGAI---PRQLDAALQTWT 93 
WP_015924502  35 KILSEQ--KMGIi-nYPGVTMNLLATSGCPHRFredrMSGCSMCNYQSNFLSSnaamaALREKDInlyAKAVRLSFENAR 111
WP_012844563  36 GFHHEQe-RAPDg-rLERVNVVFLTNRECPWT--------CTMCDLWRHTTTA-----PVTADQI---LRQLDHALERLP 97 
WP_062153583  20 -IYMGKr-KFLG----LKDLVVSFYAQKCQFQ--------CTYCNLPVKSHPD-----SLSADSI---KEQIDWVFSEFA 77 
WP_082845980  45 AFLVERe-RAASg-dIVDVATLFLTNRECPFH--------CLMCDLWKNTTQE-----SVPPGAI---PAQIDHALSRLP 106
WP_083713741  18 AFLAETe-PGPDg-ePVDVATIFLANRECPWR--------CLMCDLWRNTLEE-----TVPAGAI---AAQISHALENLP 79 
WP_077027778  23 HAIVEPe-LSANg-iVEDVATIFLTNRECPFR--------CLMCDLWQSTTDQ-----RVPVGAI---PTQIRHALESLP 84 
WP_014868284  81 G-WEERigHLDDq--PIRRLIIFLRSTGCEWVEk---TGGCTMCGFYCATSRGr----EISAEEY---IAQFEYVMDAVD 147
WP_015924480 113 GvmSKPNLFELISASDTLSREELPPQAFEELFGKNDLfsKKPFKYIMETRAPSVTSESMEMLKKYLGnKSRVLLELGIES 192
NP_149336    105 F--SKYPMICIYNAGSILNDNEIPREELYRILNVIKRn-NDIKRVVLESRPEFINVEVLNQISNILN-DKIVEIGIGLET 180
WP_012375773  94 QagKRPAQVKLYNSGSFFDVAAIPPIDYAPVARRLA----FARHVVVESHPLLIGDRAVL-FRDLL--DGSLEVAMGLET 166
WP_015924502 112 GvmSKANAFELISANDTLNQKEFPTEAFEELFSKNDLfvRKPYKYIMETRASSVTKESIEILKKYIGeKSRVLIEFGIEA 191
WP_012844563  98 E----ADAVKLYNSGSFFDRLAIPPAAYRGIAERLR----GYRRVIVESHPALLGRRTLQ-FRDLL--DGRLEVAIGVEC 166
WP_062153583  78 DslsSFQQFSVGNEGSIIDQSRFPAEAMDYLLERTREl-TALEVLSLETRPEYISVDIIQHIRQRVT-TPKIDVTIGFET 155
WP_082845980 107 P----TRHIKLYNSGNFFDPKAIPHEDHAAIADQVR----RFDHVIVENHPRLVGDEVLR-FRDRIA-PATFEVAMGLET 176
WP_083713741  80 PrtSGRSALKLYNAGSFFDPHAIPVDEYPAIAHLTA----PFDRTIVECHPALVGPRSLE-FRDLL--SGRLEVALGLET 152
WP_077027778  85 A----AQHIKLYNSGNFFDAQAIPPKDFPAIAELVG----GFKSVIVENHPQLCSDRCVE-FQELC--GTQLEIAMGLET 153
WP_014868284 148 I--GDYPVISIYNDGNIFNEREMPVAAIEKICSYIDGy-ENIKKVVVESRIDYSPDEHVAKMKKALN-GRQLEVAFGFES 223
WP_015924480 193 SDEWIRNHwINKDITNKDIITAVELIHQAG-FKFSINILFGI-PMLTEQQSIEIFKKSVEWADELg-----ADEILCFPL 265
NP_149336    181 SNDKVREYcINKGFNFKNYLEKVKLIKNYSnIKTLTYVTVKL-LFLTIDESIRDVIQTMKDLSGL------TDIISLEPI 253
WP_012375773 167 AHPEVLGK-LNKKFDLAQFARAAEFLANHQ-IALRVFLLVNP-PFLSGAEAAEWVVKSAEFAFGCg-----ASAVTLIPT 238
WP_015924502 192 GDEWVRNHwINKNITDEEIKTAIALIHEAG-FKVSVDIIIGI-PGLTEQQSIDIFRQTVDWADKLl-----ADEIICLPL 264
WP_012844563 167 VHPGVLDA-LNKRLTVADLERAVAWLHEHA-LLIRAFILLRP-PFLPDEAALDWTCRTVQWAVDRd-----IQTIVLIPT 238
WP_062153583 156 QDDHLREViLKKSIRKKNFESKVKLLGELG-VRLTCYVLLKPsPTMTEEEGISEAVASIEYLANIcqqhgvELVIYLNPV 234
WP_082845980 177 IHPEVLPA-LNKGMTLDDFDRAAEFLRSNG-IAVRAFILLRP-PFLSDDEGLDWALRSIDHAFAVg-----VSCCSVVPT 248
WP_083713741 153 VHPEVLER-LNKRMTLDQFRRAAEFLHNEI-IDLRVFILVRP-PWLSEQEGIEWARRSLDFAFDCr-----ATVCSLIPT 224
WP_077027778 154 SHEPTLAK-LNKQMTVGDFATACESLRQNH-IRLRTFILLRP-PDTPEDEGVQRAIESVRFAFDCg-----VDCCAVIPT 225
WP_014868284 224 ADPQVMNLcINKGFSANNFGHFHSRMQGMG-VLTKPLLLVKP-PFLTEAEAVNDVLQTVSYCVSRg-----IDYVDLEVT 296
WP_015924480 266 SRKEGTLQGFLYKElrdsqrlidaglvnGEHTGlPWLFSALEAVHQVAVE-----RpS---VIKKLnfAQQSSAQSPven 337
NP_149336    254 SIQKNTLVELLYTN--------------KLYDP-PKGWIIKEILANLHNTn----------LMKNFelRIGGFEFFPipd 308
WP_012375773 239 RDGNG-AIERLRES--------------GEFVP-PTLAELESAHRAALAIg------Rg-rVFVDTwal----------- 284
WP_015924502 265 NRKEGTIQGFLYSElkdnqklsevglvnGEHTGlPWLFSVLDAVFYVAKE-----SpH---AIDKLnfAQLSTSQNLien 336
WP_012844563 239 RTGNG-VMERLEQV--------------GRFAP-PTPDAIEAAAAFLFAQp------Ap-vRLLDTwdl----------- 284
WP_062153583 235 YAAKGTPLAEAFRI--------------HNYKP-VRIQSVVEVIAEAREF-------Nv-pIYTGLwtESNAFSGGD--- 288
WP_082845980 249 RAGNG-LLEELQHR--------------GEFAP-PSLQSMERVQAEGIARglrlrPeDa-rVFLDTwdl----------- 300
WP_083713741 225 RPGNG-AMESLLAA--------------GEFAR-PSLNSLESSLEYGLSLr------Ag-rVFADLwdv----------- 270
WP_077027778 226 RTGNG-IMEQLEQR--------------GRFTP-PQLTSLEVVLQEAVAWk------Rg-rVFADLwdv----------- 271
WP_014868284 297 TVEKHTVVHELWKN--------------NLYRP-PWLWSLIDLLQKCRER-----FgDhahVYVSPwtYSVESLDWA--- 353
WP_015924480 338 tsaYNssidC--YCSRNNIDVLEQFGRDKNIAKLEealeNLQNDp-CYKD-YVNLI 389
NP_149336    309 lfiSN----Cn-KCNKKLYDAIDIYNSTKDVNSIL----TLSCD--CYEE-FKKKI 352
WP_012375773 285 epfST----Cp-HCFAARCGRLERLNLTQSDEP------AVSCDc-CGAS------ 322
WP_015924502 337 tmsYNkelgC--SCSQLIIEALERFRRDKNVNALGevreIIKNDs-CYGE-YTDLL 388
WP_012844563 285 arfYP----Cp-DCARLQQERFERMNRTQTWEA------AVRCPn-CTAP------ 322
WP_062153583 289 ---YT----IhpDYRPEIREAIRQYNLTQDFNLLTpyitQLKPD--LLGE-YVPLI 334
WP_082845980 301 erfAP----Cp-QCRDARRARLETMNREQVVLP------SVSCPgdCLLHs----- 340
WP_083713741 271 dqfIR----Ca-DCSERRIQRIEGMNATQTIPA------RIQCDq-CG-------- 306
WP_077027778 272 rqfAA----Cd-VCADARIKRLSEINLTQQLPP------PIECTa-CAVTsetsp- 314
WP_014868284 354 ---RN----Cg-ECDAEIVKAIERYNCHFDLAVFE----DLDCS--CRDDgWKEAI 395
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