3L0O


Conserved Protein Domain Family
Rho

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COG1158: Rho 
Transcription termination factor Rho [Transcription]
Statistics
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PSSM-Id: 440772
Aligned: 501 rows
Threshold Bit Score: 507.645
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L0O_A        50 TESTGYFFGEGVLEIHpEGFGFLRriEDNLLPSNDDIYISPSQIRKFNLNTGDIISGVIRKPKE---------------- 113
WP_084798952  60 EHGDDHFLVTGLLDTA-GDSTFLR--TKGYTSDEGDVRVSQSLVRRWGLRRGDEITGCAKPPVE---------------- 120
WP_012786771  14 RQHQDLIQVAGILDRQ-DQHGFLR--TTGYLPGPEDVFVPPDLIRRHGLRSGDVIEGAATQSSPatsaksakpaksarsa 90 
WP_014987292   5 TSEQSTRSVTGILDLV-GNRATLR--VDGYAPSPLDLTVPQRLVRTHQLRRGDFLTGTAQSEST---------------- 65 
WP_015101339  11 TTTTTHTPVTGVLDVV-GANAFIR--TSGYLPGPNDVFVPPSTATRFGLRRGDLVAGSTGPGTG---------------- 71 
WP_023357460  35 GAPSADVAVDALLDIV-DDKAWLR--ADGYLPGPDDIPVASNQLRAHGLRRGDRVTGIAHVP------------------ 93 
WP_025358039   1 MSSNDNPAITGMIDIH-RDRTVLR--VDGYLPGPRDLQVPAALVREYGLRRGDTVTGTVGTAAR---------------- 61 
WP_067856253 263 TEDDVLVPAAGILDIL-DNYAFVR--TTGYLPSENDVYVSLSMVRKWGLRKGDAVTGQVRQPREge-------------- 325
WP_111491944  87 RSEDPPVRVSGVLDLA-GGRAHLR--TAGLLPSPEDPLVPQDLVRRLDLRRGDLVQATTARPPQgtg-----------rr 152
WP_130109311 339 TEDDVLLPIAGILDVL-DNYAFVR--TSGYLPGTSDVYVSLGQVKKYGLRRGDAVVGAIRQPREges------------g 403
3L0O_A       114 -GEKYFAMIKIEAINYRPVEAVNDRVNFDNLTPDYPRERFILETDPKIYSTRLIDLFAPIGKGQRGMIVAPPKAGKTTIL 192
WP_084798952 121 -ERKHARLDHVHSVNDLPPERLSGRPEFTDLPPLHPKERLRLASDAEDLTGRVIDLVMPTGKGQRALISAPPKAGKTSAL 199
WP_012786771  91 nSSKARPLVRVDAVNGRPSDESAARPHFAAMTPIHPQERLRLAGDTSRVSTRIIDLIAPIGKGQRGLIVAPPKTGKTMLL 170
WP_014987292  66 -NDKPAQLLTVATVNGQTPDKLTDRPVFAELVPIHPNERLRLETEQHALTTRVTDLVMPIGKGQRALIVAPPKAGKTSVL 144
WP_015101339  72 -RHQRPQLVQVDRVNGQEAGKARHRPEFADLVPVHPTERLRLETRPDELTTRVVDLLMPVGKGQRALIVAPPKAGKTSVL 150
WP_023357460  94 -SGRKPATLDVATINGQDPHQAVRRPDFYKLTALYPQERLRLETEPHILTTRVIDLVMPIGKGQRALIVSQPKAGKTMVL 172
WP_025358039  62 -GDKLPPLTQVETVNGQHPRHARNRPAFTDLVPLYPNERLRLETEPHALTARVVDLLMPVGKGQRALIVAPPKAGKTTVL 140
WP_067856253 326 rKEKFNPMVRVDTVNGTPLEEARGRIEFSSMTPVHPEERLVLETDPTVVTTRLIDLFAPVGKGQRQLVVSEQRGGRSALV 405
WP_111491944 153 sGPAARTVARVELVNGHRADALPHRPHFADLTPLHPVRRLRLETAPHRLATRVIDLLAPVGKGQRGLIVAPPKTGKTMIL 232
WP_130109311 404 gRQKYNAIVKIDSVNARPVEENEKRTDIAELTPLFPQDRLRLETTADRVLGRAIDLLAPVGLGQRGLLVLPARQAGAPVL 483
3L0O_A       193 KEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVIAAPFDMPPDKQVKVAELTLEMAKRLVEFNYDVVILLDSLT 272
WP_084798952 200 RAIARGIGANHPECHVMLVLVGERPEEVTDLRRSVRAEVAAATFDQSPQEQIAVAELALERARRLVELGRDVVILLDSLT 279
WP_012786771 171 QAIAAGVTANHPECHLMVVLLDERPEEVTDMRRTVDGEVLASTFDRPIHEHIAIAELAVERAKRLAEQGQDVVILLDSIT 250
WP_014987292 145 QAIAHGIAKNHPECELMLVLVGERPEEVTDLSRAVPAAVAASTFDQPAKEHVAVAELAIEHAKRLAEMGRDVVVLLDSLT 224
WP_015101339 151 CSIAQGISRNNPECHLIVVLVGERPEEVTDLRRTVPGEVVASTFDRSPADHIALAELAVERAKRLVEQGRDVVVLLDSLT 230
WP_023357460 173 QAMANAIATNNPEAHLMLVLVDERPEEVTDMQRSVKGEVIAATFDRPPTDHTALAELAIERAKRLVEAGRDVVVLLDSIT 252
WP_025358039 141 QDIAHGIAKNHPECHLMLVLVGERPEEVTDLARAVPAEVIASTFDRPPAEHTALAELAIERAKRLVEMGRDVVVLLDSLT 220
WP_067856253 406 RTVADALTANNPECHLMVVLIDERPEEVTELQRSVKGEVIASTFDRPAADHTTVAELAIERAKRLVELGHDVVVLLDSLT 485
WP_111491944 233 QAVADAVARNHPECHLMVVLLDERPEEVTEMRRSVRGEVLSSTFDRPARDHTALADLAVERAKRLAELGGDVVVLLDSLT 312
WP_130109311 484 AELARAVSTNAPEAHLMLVLTDAQPEEATQLERTIAGEVVAATFDRPAEDQATVVELAIERAKRLVELGHDVVVLVDSLN 563
3L0O_A       273 RLARVYNIVVPPSGKLLTGGVDPAALYKPKRFFGAARNTREGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELVLSRQ 352
WP_084798952 280 RLGRAYNLAAPTSGRVLSGGVSASALHPPKRFLGSARNVEGGGSLTIFATALVETGSTGDTVIHEEYRGTGNAELKLDRS 359
WP_012786771 251 RLCRAHNNNAKSSGRTLSGGVDASAVAAPKKLFGAARNLEEGGSVTILATALVDTGSRADDYFFEELKSTGSMELRLDRS 330
WP_014987292 225 RLARAYNLASPSSGRVLSGGVEAAALAPPKRFLGAARNFEHGGSLTIIATALVETGSVADTVIFEEYKGTGNAELKLDRA 304
WP_015101339 231 RLGRAYNLAAPASGRTLSGGIDSSALLPPKRFLGAARNIEGGGSLTIFATALVETGSTGDTLIFEEYKATGNAELKLDRK 310
WP_023357460 253 RLGRSYNLAAPARGRTMSGGIDSTALYPPKRFLGAARNIENGGSLTILATALVDTGSAMDTVIFEEFKSTGNAEIKLDRT 332
WP_025358039 221 RLGRAYNLAAPASGRILSGGVDSTALVPPKRFLGAARNIENGGSLTIFATALVETGSAGDTLIFEEYKGTGNAELRLDRK 300
WP_067856253 486 RLGRAYHQASTASSR-MAGAVDAAALHPVKTFFGAARNAEDGGSLTILATALAGTSSVVDEAVLEEIDGAANSVLRLQVD 564
WP_111491944 313 RLCRAHNTTAPGNGRTLSGGVDASALLGPKRFFGAARALEEGGSLTILATALVETGSRADDYFFEELKSTGNMELRLDRA 392
WP_130109311 564 RLARAYAQVQHTPARLGLDEIDEFALGQIKRLLAAARNVENGGSLTVLATVHAKTGIAADKTLLREVRAVANSEVRFEKS 643
3L0O_A       353 LANKRIFPAINLLLSGTRREELLLDEETLKKVWLLRRMLSAMTEEEGLTLILNKLSETSSNEEFLKLIDKEK 424
WP_084798952 360 LADRRVHPAVDIRQSSTRRDELLMSPAEQSATRVLRRVLQMREGDRGIDVLLDGLRKTSTNAEFLHRLTQTT 431
WP_012786771 331 LADKRVFPALDVAASGTRREELLMPPAELDAVRKLRRVLTARTNQQAVELLLEGAKQNAGNSEFLWRITHSS 402
WP_014987292 305 AANRRVFPAVDIAQSSTRHDELLLAPAERATIDTLRRTLGTLDGQQALDLLLEGLRKSETNAEFLAPMrg-- 374
WP_015101339 311 VAAKRVFPAVDVEQSGTRRDDLLLSPEELAVTQTLRRALDGRD----VDMLLEGLRKTRTNYEFLSQLSRPA 378
WP_023357460 333 LAESRLFPAVDVTSSGTRHDEALVGPTELALMHQLRRALSGEDRKQSLRQLLEHLKATSSNAEFLRRAARTQ 404
WP_025358039 301 IAGKRVFPAVDLAQSSTRKEELLVSPAELAATRALRRALDGREGQYGIEVLLEGLRKTSTNAEFLTQLLTAP 372
WP_067856253 565 -ENQQVFPAVDIAGSRTNHEELLLDEQELDILVATRRALVGRSPQQVLDTVVGRLEKTGSNAELLLALQRSP 635
WP_111491944 393 LADRRIFPAVDPGSSGTRREELLASPAELAATGRLRRLLGAQTAQQGMETVLARMRESAGNADFLQRVLSTT 464
WP_130109311 644 LP--GLAPVVDPSASLTRNAEAMLGSAELAAHATIRESLSED---DASDKVLQRLRGSASNAALLAEVQRTG 710
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